RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 RASAL2Q9UJF2 1139 aa14.72□□□□□ -0.05
PCDHGB3-201ENST00000576222 SMIM23A6NLE4 172 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 HSPD1P10809 573 aaKnown RBP14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 PAK2Q13177 524 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 SLC39A14Q15043 492 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 CCDC50Q8IVM0 306 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 EFCAB13Q8IY85 973 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 MAGEB6Q8N7X4 407 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 RGS22Q8NE09 1264 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 IP6K1Q92551 441 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 HAUS4Q9H6D7 363 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 CTIFO43310 598 aaKnown RBP14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 ADD1P35611 737 aaKnown RBP14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 RAD51AP2Q09MP3 1159 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 STX8Q9UNK0 236 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 PBRM1Q86U86 1689 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 MAGEA1P43355 309 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 GNAQP50148 359 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 GYS2P54840 703 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 RNASE9P60153 205 aaKnown RBP14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 IRX5P78411 483 aaPredicted RBP14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 HEATR3Q7Z4Q2 680 aa14.71□□□□□ -0.05
PCDHGB3-201ENST00000576222 TEX13AQ9BXU3 409 aaPredicted RBP14.71□□□□□ -0.06
PCDHGB3-201ENST00000576222 AATKQ6ZMQ8 1374 aa14.71□□□□□ -0.06
PCDHGB3-201ENST00000576222 CFAP65Q6ZU64 1925 aaKnown RBP14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 VSTM4Q8IW00 320 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 FBF1Q8TES7 1133 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 NELFBQ8WX92 580 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 IQSEC3Q9UPP2 1182 aaPredicted RBP14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 A0A087WUV0 522 aaPredicted RBP14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 ATP1A3P13637 1013 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 CCDC6Q16204 474 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 LRRC45Q96CN5 670 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 ZCCHC17Q9NP64 241 aaKnown RBP14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 ASXL2Q76L83 1435 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 RNF40O75150 1001 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 MBD4O95243 580 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 SPATA1Q5VX52 437 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 RUFY4Q6ZNE9 571 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 NOX5Q96PH1 765 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 E7EVH7 732 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 KRT13P13646 458 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 CC2D1AQ6P1N0 951 aaPredicted RBP14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 ZNF790Q6PG37 636 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 XAGE2Q96GT9 111 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 OSBPL5Q9H0X9 879 aaPredicted RBP14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 PRM3Q9NNZ6 103 aa14.7□□□□□ -0.06
PCDHGB3-201ENST00000576222 GOLGA8KD6RF30 607 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 PPP1R2P41236 205 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 PLCD1P51178 756 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 TTC38Q5R3I4 469 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 NOSTRINQ8IVI9 506 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 MIGA1Q8NAN2 632 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 FERMT2Q96AC1 680 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 HAUS7Q99871 368 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 CRNKL1Q9BZJ0 848 aaKnown RBP14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 ZBTB22O15209 634 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 CETN1Q12798 172 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 ZNF594Q96JF6 807 aaPredicted RBP14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 V9GY48 417 aaPredicted RBP14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 POGZQ7Z3K3 1410 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 CARMIL3Q8ND23 1372 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 PPARDQ03181 441 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 PDE4DQ08499 809 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 SLC4A8Q2Y0W8 1093 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 BICDL1Q6ZP65 573 aa14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 EPN1Q9Y6I3 576 aaPredicted RBP14.69□□□□□ -0.06
PCDHGB3-201ENST00000576222 CCDC172P0C7W6 258 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 CFAP221Q4G0U5 840 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 KRT28Q7Z3Y7 464 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 TLR7Q9NYK1 1049 aaKnown RBP14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 A0A1W2PRG0 241 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 KCNQ3O43525 872 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 GIGYF1O75420 1035 aaPredicted RBP14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 VIMP08670 466 aaKnown RBP14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 ATP1A2P50993 1020 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 CCDC26Q8TAB7 109 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 POLR1AO95602 1720 aaPredicted RBP14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 NEURL1BA8MQ27 555 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 CASP14P31944 242 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 SPATS2Q86XZ4 545 aaKnown RBP14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 SAMD9LQ8IVG5 1584 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 HELBQ8NG08 1087 aaPredicted RBP14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 BLZF1Q9H2G9 400 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 RBM28Q9NW13 759 aaKnown RBP14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 CPSF1Q10570 1443 aaKnown RBP14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 CEBPAP49715 358 aaPredicted RBP14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 CASP8Q14790 479 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 PNMA8AQ86V59 439 aaPredicted RBP14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 PLBD2Q8NHP8 589 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 PAIP2Q9BPZ3 127 aaKnown RBP14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 SWAP70Q9UH65 585 aa14.68□□□□□ -0.06
PCDHGB3-201ENST00000576222 POTEJP0CG39 1038 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 PRPHP41219 470 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 LACTBP83111 547 aaPredicted RBP14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 POLA2Q14181 598 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 CEP85LQ5SZL2 805 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 PIK3AP1Q6ZUJ8 805 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 C19orf44Q9H6X5 657 aa14.67□□□□□ -0.06
PCDHGB3-201ENST00000576222 NAPAP54920 295 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms