RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 SPSB2Q99619 263 aa11.66□□□□□ -0.54
NPLOC4-210ENST00000572824 VEZTQ9HBM0 779 aa11.66□□□□□ -0.54
NPLOC4-210ENST00000572824 ANGEL1Q9UNK9 670 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-210ENST00000572824 ALDH1L1O75891 902 aa11.65□□□□□ -0.54
NPLOC4-210ENST00000572824 CACNB3P54284 484 aa11.65□□□□□ -0.54
NPLOC4-210ENST00000572824 CAP1Q01518 475 aa11.65□□□□□ -0.54
NPLOC4-210ENST00000572824 CTDSPL2Q05D32 466 aa11.65□□□□□ -0.54
NPLOC4-210ENST00000572824 NBPF12Q5TAG4 269 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-210ENST00000572824 ZNF804AQ7Z570 1209 aa11.65□□□□□ -0.54
NPLOC4-210ENST00000572824 VGLL2Q8N8G2 317 aa11.65□□□□□ -0.54
NPLOC4-210ENST00000572824 FAM84BQ96KN1 310 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-210ENST00000572824 SNRKQ9NRH2 765 aa11.65□□□□□ -0.54
NPLOC4-210ENST00000572824 RIPOR2Q9Y4F9 1068 aa11.65□□□□□ -0.54
NPLOC4-210ENST00000572824 UTYO14607 1347 aa11.64□□□□□ -0.55
NPLOC4-210ENST00000572824 CENPFP49454 3210 aa11.64□□□□□ -0.55
NPLOC4-210ENST00000572824 TLL1O43897 1013 aa11.64□□□□□ -0.55
NPLOC4-210ENST00000572824 FKBP1BP68106 108 aa11.64□□□□□ -0.55
NPLOC4-210ENST00000572824 CHAF1AQ13111 956 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-210ENST00000572824 DLGAP5Q15398 846 aa11.64□□□□□ -0.55
NPLOC4-210ENST00000572824 MFSD14BQ5SR56 506 aa11.64□□□□□ -0.55
NPLOC4-210ENST00000572824 DESI1Q6ICB0 168 aa11.64□□□□□ -0.55
NPLOC4-210ENST00000572824 FAM160A2Q8N612 972 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-210ENST00000572824 TSC1Q92574 1164 aa11.64□□□□□ -0.55
NPLOC4-210ENST00000572824 DEFB129Q9H1M3 183 aa11.64□□□□□ -0.55
NPLOC4-210ENST00000572824 SAGE1Q9NXZ1 904 aa11.64□□□□□ -0.55
NPLOC4-210ENST00000572824 TNNQ9UQP3 1299 aa11.64□□□□□ -0.55
NPLOC4-210ENST00000572824 BRCA2P51587 3418 aa11.63□□□□□ -0.55
NPLOC4-210ENST00000572824 SLFN5Q08AF3 891 aa11.63□□□□□ -0.55
NPLOC4-210ENST00000572824 RABL6Q3YEC7 729 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-210ENST00000572824 LDLRAD1Q5T700 205 aa11.63□□□□□ -0.55
NPLOC4-210ENST00000572824 APOBEC3FQ8IUX4 373 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-210ENST00000572824 TDRD7Q8NHU6 1098 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-210ENST00000572824 ZNF296Q8WUU4 475 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-210ENST00000572824 USP44Q9H0E7 712 aa11.63□□□□□ -0.55
NPLOC4-210ENST00000572824 TDRD3Q9H7E2 651 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-210ENST00000572824 HDAC9Q9UKV0 1011 aa11.63□□□□□ -0.55
NPLOC4-210ENST00000572824 FAM205AQ6ZU69 1335 aa11.62□□□□□ -0.55
NPLOC4-210ENST00000572824 IGF2BP3O00425 579 aaKnown RBP eCLIP11.62□□□□□ -0.55
NPLOC4-210ENST00000572824 RFX5P48382 616 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-210ENST00000572824 RBM5P52756 815 aaKnown RBP eCLIP11.62□□□□□ -0.55
NPLOC4-210ENST00000572824 MSS51Q4VC12 460 aa11.62□□□□□ -0.55
NPLOC4-210ENST00000572824 SPRYD7Q5W111 196 aa11.62□□□□□ -0.55
NPLOC4-210ENST00000572824 MTMR14Q8NCE2 650 aa11.62□□□□□ -0.55
NPLOC4-210ENST00000572824 TTF2Q9UNY4 1162 aaKnown RBP11.62□□□□□ -0.55
NPLOC4-210ENST00000572824 TCP10L2B9ZVM9 353 aa11.61□□□□□ -0.55
NPLOC4-210ENST00000572824 ADH1BP00325 375 aa11.61□□□□□ -0.55
NPLOC4-210ENST00000572824 RASA3Q14644 834 aa11.61□□□□□ -0.55
NPLOC4-210ENST00000572824 METTL24Q5JXM2 366 aa11.61□□□□□ -0.55
NPLOC4-210ENST00000572824 WNK4Q96J92 1243 aa11.61□□□□□ -0.55
NPLOC4-210ENST00000572824 TEPSINQ96N21 525 aa11.61□□□□□ -0.55
NPLOC4-210ENST00000572824 TMEM39BQ9GZU3 492 aa11.61□□□□□ -0.55
NPLOC4-210ENST00000572824 ZNF70Q9UC06 446 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-210ENST00000572824 AK9Q5TCS8 1911 aa11.6□□□□□ -0.55
NPLOC4-210ENST00000572824 USP2O75604 605 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-210ENST00000572824 HIBADHP31937 336 aaKnown RBP11.6□□□□□ -0.55
NPLOC4-210ENST00000572824 NF2P35240 595 aa11.6□□□□□ -0.55
NPLOC4-210ENST00000572824 UBE4AQ14139 1066 aa11.6□□□□□ -0.55
NPLOC4-210ENST00000572824 FBXO33Q7Z6M2 555 aa11.6□□□□□ -0.55
NPLOC4-210ENST00000572824 CTU1Q7Z7A3 348 aaKnown RBP11.6□□□□□ -0.55
NPLOC4-210ENST00000572824 NKX2-3Q8TAU0 364 aa11.6□□□□□ -0.55
NPLOC4-210ENST00000572824 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-210ENST00000572824 MYH2Q9UKX2 1941 aa11.6□□□□□ -0.55
NPLOC4-210ENST00000572824 DOCK2Q92608 1830 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 E9PSI1 815 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 GPR25O00155 361 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 JUNDP17535 347 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 CRKP46108 304 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 TM4SF4P48230 202 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 RGS19P49795 217 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 MLLT1Q03111 559 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 LYPD8Q6UX82 237 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 ATG9AQ7Z3C6 839 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 ARMC9Q7Z3E5 817 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 DZIP1LQ8IYY4 767 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 PTPN18Q99952 460 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 SIL1Q9H173 461 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 ELP3Q9H9T3 547 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 SMC4Q9NTJ3 1288 aa11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 PA2G4Q9UQ80 394 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 MKI67P46013 3256 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 MYO5AQ9Y4I1 1855 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 KIAA0100Q14667 2235 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-210ENST00000572824 SLURP2P0DP57 97 aa11.58□□□□□ -0.56
NPLOC4-210ENST00000572824 FGFR2P21802 821 aa11.58□□□□□ -0.56
NPLOC4-210ENST00000572824 FKBP1AP62942 108 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-210ENST00000572824 KCNC4Q03721 635 aa11.58□□□□□ -0.56
NPLOC4-210ENST00000572824 MAP3K11Q16584 847 aa11.58□□□□□ -0.56
NPLOC4-210ENST00000572824 TRMT2AQ8IZ69 625 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-210ENST00000572824 LRRN4Q8WUT4 740 aa11.58□□□□□ -0.56
NPLOC4-210ENST00000572824 PTPRCP08575 1304 aa11.58□□□□□ -0.56
NPLOC4-210ENST00000572824 MROH5Q6ZUA9 1318 aa11.58□□□□□ -0.56
NPLOC4-210ENST00000572824 DXOO77932 396 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-210ENST00000572824 PDE8BO95263 885 aa11.57□□□□□ -0.56
NPLOC4-210ENST00000572824 ADORA1P30542 326 aa11.57□□□□□ -0.56
NPLOC4-210ENST00000572824 MMP16P51512 607 aa11.57□□□□□ -0.56
NPLOC4-210ENST00000572824 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.57□□□□□ -0.56
NPLOC4-210ENST00000572824 MEIS3Q99687 375 aa11.57□□□□□ -0.56
NPLOC4-210ENST00000572824 PRDM9Q9NQV7 894 aa11.57□□□□□ -0.56
NPLOC4-210ENST00000572824 NOB1Q9ULX3 412 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-210ENST00000572824 LRRFIP2Q9Y608 721 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms