RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 MARCH6O60337 910 aa9.33□□□□□ -0.92
CNOT1-222ENST00000570139 HOXD8P13378 290 aaPredicted RBP9.33□□□□□ -0.92
CNOT1-222ENST00000570139 EIF6P56537 245 aaKnown RBP9.33□□□□□ -0.92
CNOT1-222ENST00000570139 PLAURQ03405 335 aa9.33□□□□□ -0.92
CNOT1-222ENST00000570139 IFRD2Q12894 506 aaPredicted RBP9.33□□□□□ -0.92
CNOT1-222ENST00000570139 LAMC2Q13753 1193 aa9.33□□□□□ -0.92
CNOT1-222ENST00000570139 SCARF1Q14162 830 aa9.33□□□□□ -0.92
CNOT1-222ENST00000570139 MRPL14Q6P1L8 145 aaKnown RBP9.33□□□□□ -0.92
CNOT1-222ENST00000570139 ANKLE2Q86XL3 938 aa9.33□□□□□ -0.92
CNOT1-222ENST00000570139 OR6P1Q8NGX9 317 aa9.33□□□□□ -0.92
CNOT1-222ENST00000570139 NECAB3Q96P71 396 aaPredicted RBP9.33□□□□□ -0.92
CNOT1-222ENST00000570139 CRBNQ96SW2 442 aa9.33□□□□□ -0.92
CNOT1-222ENST00000570139 TLR7Q9NYK1 1049 aaKnown RBP9.33□□□□□ -0.92
CNOT1-222ENST00000570139 SAMM50Q9Y512 469 aa9.33□□□□□ -0.92
CNOT1-222ENST00000570139 CCDC85CA6NKD9 419 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 EFSO43281 561 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 TFE3P19532 575 aaPredicted RBP9.32□□□□□ -0.92
CNOT1-222ENST00000570139 LTKP29376 864 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 CRKP46108 304 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 PRR20EP86478 221 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 PRR20CP86479 221 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 PRR20DP86480 221 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 PRR20BP86481 221 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 PRR20AP86496 221 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 SEZ6Q53EL9 994 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 TMEM132EQ6IEE7 984 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 NOL8Q76FK4 1167 aaKnown RBP9.32□□□□□ -0.92
CNOT1-222ENST00000570139 APPBP2Q92624 585 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 CNTNAP3BQ96NU0 1288 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 FERD3LQ96RJ6 166 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 CNTNAP3Q9BZ76 1288 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 BHLHE41Q9C0J9 482 aaPredicted RBP9.32□□□□□ -0.92
CNOT1-222ENST00000570139 IFT57Q9NWB7 429 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 MSRB2Q9Y3D2 182 aa9.32□□□□□ -0.92
CNOT1-222ENST00000570139 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.32□□□□□ -0.92
CNOT1-222ENST00000570139 ATXN7O15265 892 aaPredicted RBP9.31□□□□□ -0.92
CNOT1-222ENST00000570139 MAP3K6O95382 1288 aa9.31□□□□□ -0.92
CNOT1-222ENST00000570139 GRIA4P48058 902 aa9.31□□□□□ -0.92
CNOT1-222ENST00000570139 CWF19L2Q2TBE0 894 aaKnown RBP9.31□□□□□ -0.92
CNOT1-222ENST00000570139 ARSHQ5FYA8 562 aa9.31□□□□□ -0.92
CNOT1-222ENST00000570139 HOMER1Q86YM7 354 aa9.31□□□□□ -0.92
CNOT1-222ENST00000570139 TRPM4Q8TD43 1214 aa9.31□□□□□ -0.92
CNOT1-222ENST00000570139 SH3TC2Q8TF17 1288 aa9.31□□□□□ -0.92
CNOT1-222ENST00000570139 MIR1-1HGQ9H1L0 117 aa9.31□□□□□ -0.92
CNOT1-222ENST00000570139 DZANK1Q9NVP4 752 aa9.31□□□□□ -0.92
CNOT1-222ENST00000570139 ACTR10Q9NZ32 417 aa9.31□□□□□ -0.92
CNOT1-222ENST00000570139 POGKQ9P215 609 aa9.31□□□□□ -0.92
CNOT1-222ENST00000570139 GPN3Q9UHW5 284 aaPredicted RBP9.31□□□□□ -0.92
CNOT1-222ENST00000570139 PPT2Q9UMR5 302 aa9.31□□□□□ -0.92
CNOT1-222ENST00000570139 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.31□□□□□ -0.92
CNOT1-222ENST00000570139 METP08581 1390 aa9.31□□□□□ -0.92
CNOT1-222ENST00000570139 NWD1Q149M9 1564 aa9.31□□□□□ -0.92
CNOT1-222ENST00000570139 CHD2O14647 1828 aaKnown RBP9.31□□□□□ -0.92
CNOT1-222ENST00000570139 NPC1L1Q9UHC9 1359 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 FAM221BA6H8Z2 402 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 IMPDH2P12268 514 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 NFKB1P19838 968 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 GIPRP48546 466 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 ZNF165P49910 485 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 PPP2R3AQ06190 1150 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 MPP2Q14168 576 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 DDR2Q16832 855 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 CCDC81Q6ZN84 652 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 GAS2L1Q99501 681 aaPredicted RBP9.3□□□□□ -0.92
CNOT1-222ENST00000570139 POLR3GLQ9BT43 218 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 PCDH12Q9NPG4 1184 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 SEC31BQ9NQW1 1179 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 PCDHGC4Q9Y5F7 938 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 ITSN1Q15811 1721 aa9.3□□□□□ -0.92
CNOT1-222ENST00000570139 NPHP4O75161 1426 aaPredicted RBP9.3□□□□□ -0.92
CNOT1-222ENST00000570139 A0A096LPE4 126 aa9.29□□□□□ -0.92
CNOT1-222ENST00000570139 A0A1W2PPZ6 126 aa9.29□□□□□ -0.92
CNOT1-222ENST00000570139 MCM4P33991 863 aa9.29□□□□□ -0.92
CNOT1-222ENST00000570139 SFSWAPQ12872 951 aaKnown RBP9.29□□□□□ -0.92
CNOT1-222ENST00000570139 CEP120Q8N960 986 aa9.29□□□□□ -0.92
CNOT1-222ENST00000570139 TMEM102Q8N9M5 508 aaPredicted RBP9.29□□□□□ -0.92
CNOT1-222ENST00000570139 GATAD2BQ8WXI9 593 aa9.29□□□□□ -0.92
CNOT1-222ENST00000570139 PRAM1Q96QH2 718 aa9.29□□□□□ -0.92
CNOT1-222ENST00000570139 ZNF576Q9H609 170 aa9.29□□□□□ -0.92
CNOT1-222ENST00000570139 FANCLQ9NW38 375 aa9.29□□□□□ -0.92
CNOT1-222ENST00000570139 ZFATQ9P243 1243 aa9.29□□□□□ -0.92
CNOT1-222ENST00000570139 ATP7BP35670 1465 aa9.28□□□□□ -0.92
CNOT1-222ENST00000570139 KHNYNO15037 678 aaKnown RBP9.28□□□□□ -0.92
CNOT1-222ENST00000570139 RASGRF1Q13972 1273 aa9.28□□□□□ -0.92
CNOT1-222ENST00000570139 RALBP1Q15311 655 aa9.28□□□□□ -0.92
CNOT1-222ENST00000570139 FBXW10Q5XX13 1052 aa9.28□□□□□ -0.92
CNOT1-222ENST00000570139 REXO1Q8N1G1 1221 aaKnown RBP9.28□□□□□ -0.92
CNOT1-222ENST00000570139 PRKRIP1Q9H875 184 aaPredicted RBP9.28□□□□□ -0.92
CNOT1-222ENST00000570139 TMEM39AQ9NV64 488 aa9.28□□□□□ -0.92
CNOT1-222ENST00000570139 STK26Q9P289 416 aa9.28□□□□□ -0.92
CNOT1-222ENST00000570139 SOS2Q07890 1332 aaPredicted RBP9.28□□□□□ -0.92
CNOT1-222ENST00000570139 NKTRP30414 1462 aaKnown RBP9.28□□□□□ -0.92
CNOT1-222ENST00000570139 NSD2O96028 1365 aa9.27□□□□□ -0.93
CNOT1-222ENST00000570139 ANKRD36BQ8N2N9 1353 aa9.27□□□□□ -0.93
CNOT1-222ENST00000570139 TOPAZ1Q8N9V7 1692 aa9.27□□□□□ -0.93
CNOT1-222ENST00000570139 FIGNL2A6NMB9 653 aa9.27□□□□□ -0.93
CNOT1-222ENST00000570139 PDPK1O15530 556 aa9.27□□□□□ -0.93
CNOT1-222ENST00000570139 F13A1P00488 732 aa9.27□□□□□ -0.93
CNOT1-222ENST00000570139 NRLP54845 237 aa9.27□□□□□ -0.93
CNOT1-222ENST00000570139 FXNQ16595 210 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms