RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.8	□□□□□ -0.2
SPG7-222	ENST00000569820	CEP83	Q9Y592	693 aa		13.8	□□□□□ -0.2
SPG7-222	ENST00000569820	MAST2	Q6P0Q8	1798 aa		13.8	□□□□□ -0.2
SPG7-222	ENST00000569820	PRR29	P0C7W0	189 aa		13.8	□□□□□ -0.2
SPG7-222	ENST00000569820	KLRK1	P26718	216 aa		13.8	□□□□□ -0.2
SPG7-222	ENST00000569820	TMCO3	Q6UWJ1	677 aa		13.8	□□□□□ -0.2
SPG7-222	ENST00000569820	NEK11	Q8NG66	645 aa		13.8	□□□□□ -0.2
SPG7-222	ENST00000569820	BRF1	Q92994	677 aa		13.8	□□□□□ -0.2
SPG7-222	ENST00000569820	FAM84B	Q96KN1	310 aa	Predicted RBP	13.8	□□□□□ -0.2
SPG7-222	ENST00000569820	STRBP	Q96SI9	672 aa	Known RBP	13.8	□□□□□ -0.2
SPG7-222	ENST00000569820	NBPF3	Q9H094	633 aa		13.8	□□□□□ -0.2
SPG7-222	ENST00000569820	MUM1L1	Q5H9M0	696 aa		13.79	□□□□□ -0.2
SPG7-222	ENST00000569820	LRRN4CL	Q8ND94	238 aa		13.79	□□□□□ -0.2
SPG7-222	ENST00000569820	AIDA	Q96BJ3	306 aa		13.79	□□□□□ -0.2
SPG7-222	ENST00000569820	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.79	□□□□□ -0.2	1e-6	■■□□□ 12.6
SPG7-222	ENST00000569820	POLR3G	O15318	223 aa	Predicted RBP	13.79	□□□□□ -0.2
SPG7-222	ENST00000569820	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
SPG7-222	ENST00000569820	GUCY2C	P25092	1073 aa		13.79	□□□□□ -0.2
SPG7-222	ENST00000569820	STK3	Q13188	491 aa		13.79	□□□□□ -0.2
SPG7-222	ENST00000569820	CCDC93	Q567U6	631 aa		13.79	□□□□□ -0.2
SPG7-222	ENST00000569820	SYT10	Q6XYQ8	523 aa		13.79	□□□□□ -0.2
SPG7-222	ENST00000569820	PPP1R13B	Q96KQ4	1090 aa		13.79	□□□□□ -0.2
SPG7-222	ENST00000569820	ANKRD2	Q9GZV1	360 aa		13.79	□□□□□ -0.2
SPG7-222	ENST00000569820	GNL3L	Q9NVN8	582 aa	Known RBP	13.79	□□□□□ -0.2
SPG7-222	ENST00000569820	ZMYM6	O95789	1325 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	IRS2	Q9Y4H2	1338 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	ANKRD31	Q8N7Z5	1873 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	NRXN2	Q9P2S2	1712 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	CTAGE5	O15320	804 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	MBD4	O95243	580 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	CAVIN4	Q5BKX8	364 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	FBXO33	Q7Z6M2	555 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	SLC51A	Q86UW1	340 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	RGPD4	Q7Z3J3	1758 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	ZNF213	O14771	459 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	CCDC172	P0C7W6	258 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	GRAP	Q13588	217 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	E4F1	Q66K89	784 aa	Predicted RBP	13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	FBXL16	Q8N461	479 aa		13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	GRAPL	Q8TC17	118 aa	Predicted RBP	13.78	□□□□□ -0.2
SPG7-222	ENST00000569820	KIAA1551	Q9HCM1	1747 aa		13.77	□□□□□ -0.2
SPG7-222	ENST00000569820	TUBB4A	P04350	444 aa		13.77	□□□□□ -0.21
SPG7-222	ENST00000569820	DDR1	Q08345	913 aa		13.77	□□□□□ -0.21
SPG7-222	ENST00000569820	GPS2	Q13227	327 aa		13.77	□□□□□ -0.21
SPG7-222	ENST00000569820	CHST3	Q7LGC8	479 aa		13.77	□□□□□ -0.21
SPG7-222	ENST00000569820	TBC1D10C	Q8IV04	446 aa		13.77	□□□□□ -0.21
SPG7-222	ENST00000569820	DHX40	Q8IX18	779 aa	Known RBP	13.77	□□□□□ -0.21
SPG7-222	ENST00000569820	UBXN4	Q92575	508 aa		13.77	□□□□□ -0.21
SPG7-222	ENST00000569820	ARMT1	Q9H993	441 aa		13.77	□□□□□ -0.21
SPG7-222	ENST00000569820	LRP2BP	Q9P2M1	347 aa		13.77	□□□□□ -0.21
SPG7-222	ENST00000569820	LRRC37A	A6NMS7	1700 aa		13.77	□□□□□ -0.21
SPG7-222	ENST00000569820	CCDC88A	Q3V6T2	1871 aa		13.77	□□□□□ -0.21
SPG7-222	ENST00000569820	PNPLA7	Q6ZV29	1317 aa		13.77	□□□□□ -0.21
SPG7-222	ENST00000569820	PSD	A5PKW4	1024 aa	Predicted RBP	13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	PFKFB2	O60825	505 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	SERPINB2	P05120	415 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	APOBR	Q0VD83	1088 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	ALX1	Q15699	326 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	ZNF827	Q17R98	1081 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	CRY2	Q49AN0	593 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	KRBA2	Q6ZNG9	492 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	ADGRA1	Q86SQ6	560 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	VPS37D	Q86XT2	251 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	LCORL	Q8N3X6	602 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	IMPACT	Q9P2X3	320 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	DENND2A	Q9ULE3	1009 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	PDS5A	Q29RF7	1337 aa	Known RBP	13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	SEMA3E	O15041	775 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	PLSCR1	O15162	318 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	ANTXR2	P58335	489 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	SCRN1	Q12765	414 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	EGFL6	Q8IUX8	553 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	ANO10	Q9NW15	660 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	ORC3	Q9UBD5	711 aa	Predicted RBP	13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	CFAP45	Q9UL16	551 aa		13.76	□□□□□ -0.21
SPG7-222	ENST00000569820	POLRMT	O00411	1230 aa	Known RBP	13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	CASQ1	P31415	396 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	CEP57L1	Q8IYX8	460 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	CCDC150	Q8NCX0	1101 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	NCOA7	Q8NI08	942 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	ABCF2	Q9UG63	623 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	LTBP1	Q14766	1721 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	GSG1L2	A8MUP6	293 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	NRDC	O43847	1150 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	JAK2	O60674	1132 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	EVC	P57679	992 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	ST5	P78524	1137 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	TXNRD3	Q86VQ6	643 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	IFNL3	Q8IZI9	196 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	AOPEP	Q8N6M6	819 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	GPHN	Q9NQX3	736 aa	Predicted RBP	13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	TFCP2L1	Q9NZI6	479 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	WDR19	Q8NEZ3	1342 aa		13.75	□□□□□ -0.21
SPG7-222	ENST00000569820	ATP8B1	O43520	1251 aa		13.74	□□□□□ -0.21
SPG7-222	ENST00000569820	PRC1	O43663	620 aa		13.74	□□□□□ -0.21

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