RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 TRIM75PA6NK02 468 aa23.13■■□□□ 1.29
SPSB3-210ENST00000568416 ECM2O94769 699 aaPredicted RBP23.13■■□□□ 1.29
SPSB3-210ENST00000568416 RRP1BQ14684 758 aaKnown RBP23.13■■□□□ 1.29
SPSB3-210ENST00000568416 SRRDQ9UH36 339 aa23.13■■□□□ 1.29
SPSB3-210ENST00000568416 HERC5Q9UII4 1024 aaKnown RBP23.13■■□□□ 1.29
SPSB3-210ENST00000568416 RBBP6Q7Z6E9 1792 aaKnown RBP23.13■■□□□ 1.29
SPSB3-210ENST00000568416 OSBPP22059 807 aa23.12■■□□□ 1.29
SPSB3-210ENST00000568416 CAP2P40123 477 aa23.12■■□□□ 1.29
SPSB3-210ENST00000568416 SH3TC2Q8TF17 1288 aa23.12■■□□□ 1.29
SPSB3-210ENST00000568416 TGFBRAP1Q8WUH2 860 aa23.12■■□□□ 1.29
SPSB3-210ENST00000568416 TMEM106CQ9BVX2 250 aa23.12■■□□□ 1.29
SPSB3-210ENST00000568416 DHX36Q9H2U1 1008 aaKnown RBP23.12■■□□□ 1.29
SPSB3-210ENST00000568416 PI4KBQ9UBF8 816 aa23.12■■□□□ 1.29
SPSB3-210ENST00000568416 FLT1P17948 1338 aa23.11■■□□□ 1.29
SPSB3-210ENST00000568416 PHIPQ8WWQ0 1821 aa23.11■■□□□ 1.29
SPSB3-210ENST00000568416 FMNL1O95466 1100 aaPredicted RBP23.11■■□□□ 1.29
SPSB3-210ENST00000568416 EN2P19622 333 aaPredicted RBP23.11■■□□□ 1.29
SPSB3-210ENST00000568416 MAPKAPK5Q8IW41 473 aa23.11■■□□□ 1.29
SPSB3-210ENST00000568416 TBC1D2Q9BYX2 928 aa23.11■■□□□ 1.29
SPSB3-210ENST00000568416 AGTPBP1Q9UPW5 1226 aa23.11■■□□□ 1.29
SPSB3-210ENST00000568416 CYP7A1P22680 504 aa23.1■■□□□ 1.29
SPSB3-210ENST00000568416 HOXD10P28358 340 aa23.1■■□□□ 1.29
SPSB3-210ENST00000568416 HSP90AB4PQ58FF6 505 aa23.1■■□□□ 1.29
SPSB3-210ENST00000568416 AACSQ86V21 672 aa23.1■■□□□ 1.29
SPSB3-210ENST00000568416 METTL16Q86W50 562 aaKnown RBP23.1■■□□□ 1.29
SPSB3-210ENST00000568416 RHPN1Q8TCX5 695 aa23.1■■□□□ 1.29
SPSB3-210ENST00000568416 DYNLL1P63167 89 aaKnown RBP23.09■■□□□ 1.29
SPSB3-210ENST00000568416 SPP2Q13103 211 aa23.09■■□□□ 1.29
SPSB3-210ENST00000568416 RPAP2Q8IXW5 612 aaPredicted RBP23.09■■□□□ 1.29
SPSB3-210ENST00000568416 ZNF280CQ8ND82 737 aa23.09■■□□□ 1.29
SPSB3-210ENST00000568416 ANTXR1Q9H6X2 564 aa23.09■■□□□ 1.29
SPSB3-210ENST00000568416 DNAJC18Q9H819 358 aa23.09■■□□□ 1.29
SPSB3-210ENST00000568416 DDX19BQ9UMR2 479 aa23.09■■□□□ 1.29
SPSB3-210ENST00000568416 NDUFB9Q9Y6M9 179 aa23.09■■□□□ 1.29
SPSB3-210ENST00000568416 USP17L5A8MUK1 530 aa23.08■■□□□ 1.29
SPSB3-210ENST00000568416 IDH1O75874 414 aaKnown RBP23.08■■□□□ 1.29
SPSB3-210ENST00000568416 FCGRTP55899 365 aa23.08■■□□□ 1.29
SPSB3-210ENST00000568416 TREML2Q5T2D2 321 aa23.08■■□□□ 1.29
SPSB3-210ENST00000568416 FOXP4Q8IVH2 680 aaPredicted RBP23.08■■□□□ 1.29
SPSB3-210ENST00000568416 PROCA1Q8NCQ7 364 aaPredicted RBP23.08■■□□□ 1.29
SPSB3-210ENST00000568416 IL1RAPL2Q9NP60 686 aa23.08■■□□□ 1.29
SPSB3-210ENST00000568416 ZBTB40Q9NUA8 1239 aa23.08■■□□□ 1.29
SPSB3-210ENST00000568416 COG6Q9Y2V7 657 aa23.08■■□□□ 1.29
SPSB3-210ENST00000568416 SIPA1L1O43166 1804 aa23.08■■□□□ 1.28
SPSB3-210ENST00000568416 MYPNQ86TC9 1320 aa23.08■■□□□ 1.28
SPSB3-210ENST00000568416 SLC34A2O95436 690 aa23.07■■□□□ 1.28
SPSB3-210ENST00000568416 SLC4A8Q2Y0W8 1093 aa23.07■■□□□ 1.28
SPSB3-210ENST00000568416 SIRT2Q8IXJ6 389 aa23.07■■□□□ 1.28
SPSB3-210ENST00000568416 PALD1Q9ULE6 856 aa23.07■■□□□ 1.28
SPSB3-210ENST00000568416 PTPRFP10586 1907 aa23.06■■□□□ 1.28
SPSB3-210ENST00000568416 SH3D19Q5HYK7 790 aa23.06■■□□□ 1.28
SPSB3-210ENST00000568416 TMED8Q6PL24 325 aaPredicted RBP23.06■■□□□ 1.28
SPSB3-210ENST00000568416 MAGEB6Q8N7X4 407 aa23.06■■□□□ 1.28
SPSB3-210ENST00000568416 RAET1EQ8TD07 263 aa23.06■■□□□ 1.28
SPSB3-210ENST00000568416 SMCR8Q8TEV9 937 aaPredicted RBP23.06■■□□□ 1.28
SPSB3-210ENST00000568416 AS3MTQ9HBK9 375 aa23.06■■□□□ 1.28
SPSB3-210ENST00000568416 MYCP01106 439 aaPredicted RBP23.05■■□□□ 1.28
SPSB3-210ENST00000568416 GRK4P32298 578 aa23.05■■□□□ 1.28
SPSB3-210ENST00000568416 JAG1P78504 1218 aa23.05■■□□□ 1.28
SPSB3-210ENST00000568416 PRKCZQ05513 592 aa23.05■■□□□ 1.28
SPSB3-210ENST00000568416 CERS3Q8IU89 383 aa23.05■■□□□ 1.28
SPSB3-210ENST00000568416 MIGA1Q8NAN2 632 aa23.05■■□□□ 1.28
SPSB3-210ENST00000568416 KIF1BPQ96EK5 621 aa23.05■■□□□ 1.28
SPSB3-210ENST00000568416 WDR18Q9BV38 432 aa23.05■■□□□ 1.28
SPSB3-210ENST00000568416 RCAN3Q9UKA8 241 aa23.05■■□□□ 1.28
SPSB3-210ENST00000568416 PNMA3Q9UL41 463 aa23.05■■□□□ 1.28
SPSB3-210ENST00000568416 HMGCS2P54868 508 aa23.04■■□□□ 1.28
SPSB3-210ENST00000568416 MAP3K12Q12852 859 aa23.04■■□□□ 1.28
SPSB3-210ENST00000568416 CLASRPQ8N2M8 674 aaKnown RBP23.04■■□□□ 1.28
SPSB3-210ENST00000568416 CRACR2BQ8N4Y2 399 aaPredicted RBP23.04■■□□□ 1.28
SPSB3-210ENST00000568416 SAP30BPQ9UHR5 308 aaKnown RBP23.04■■□□□ 1.28
SPSB3-210ENST00000568416 GABRQQ9UN88 632 aa23.04■■□□□ 1.28
SPSB3-210ENST00000568416 MYO5AQ9Y4I1 1855 aaKnown RBP23.04■■□□□ 1.28
SPSB3-210ENST00000568416 FOCADQ5VW36 1801 aa23.03■■□□□ 1.28
SPSB3-210ENST00000568416 HMMRO75330 724 aa23.03■■□□□ 1.28
SPSB3-210ENST00000568416 HLA-DOAP06340 250 aa23.03■■□□□ 1.28
SPSB3-210ENST00000568416 ASNSP08243 561 aa23.03■■□□□ 1.28
SPSB3-210ENST00000568416 MTFR1Q15390 333 aa23.03■■□□□ 1.28
SPSB3-210ENST00000568416 TRIM34Q9BYJ4 488 aa23.03■■□□□ 1.28
SPSB3-210ENST00000568416 GINM1Q9NU53 330 aa23.03■■□□□ 1.28
SPSB3-210ENST00000568416 LOC285556D6RIA3 1793 aa23.03■■□□□ 1.28
SPSB3-210ENST00000568416 PABPC4Q13310 644 aaKnown RBP eCLIP23.02■■□□□ 1.28
SPSB3-210ENST00000568416 ANKRD13CQ8N6S4 541 aa23.02■■□□□ 1.28
SPSB3-210ENST00000568416 CHMP4BQ9H444 224 aaKnown RBP23.02■■□□□ 1.28
SPSB3-210ENST00000568416 ATAD5Q96QE3 1844 aa23.02■■□□□ 1.28
SPSB3-210ENST00000568416 CDK5RAP2Q96SN8 1893 aa23.02■■□□□ 1.28
SPSB3-210ENST00000568416 APBB1O00213 710 aa23.01■■□□□ 1.27
SPSB3-210ENST00000568416 RAB11FIP3O75154 756 aa23.01■■□□□ 1.27
SPSB3-210ENST00000568416 GDF11O95390 407 aa23.01■■□□□ 1.27
SPSB3-210ENST00000568416 BACE1P56817 501 aa23.01■■□□□ 1.27
SPSB3-210ENST00000568416 TTF1Q15361 905 aaPredicted RBP23.01■■□□□ 1.27
SPSB3-210ENST00000568416 FAM110CQ1W6H9 321 aa23.01■■□□□ 1.27
SPSB3-210ENST00000568416 SHROOM1Q2M3G4 852 aaPredicted RBP23.01■■□□□ 1.27
SPSB3-210ENST00000568416 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.01■■□□□ 1.27
SPSB3-210ENST00000568416 TNPO2O14787 897 aaKnown RBP23■■□□□ 1.27
SPSB3-210ENST00000568416 USP5P45974 858 aa23■■□□□ 1.27
SPSB3-210ENST00000568416 MTMR2Q13614 643 aa23■■□□□ 1.27
SPSB3-210ENST00000568416 SLAIN1Q8ND83 568 aa23■■□□□ 1.27
SPSB3-210ENST00000568416 RIOK1Q9BRS2 568 aaKnown RBP23■■□□□ 1.27
SPSB3-210ENST00000568416 ZBTB21Q9ULJ3 1066 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms