RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 C12orf60Q5U649 245 aa15.32■□□□□ 0.04
SPG7-209ENST00000564047 FAM83AQ86UY5 434 aa15.32■□□□□ 0.04
SPG7-209ENST00000564047 TRPM4Q8TD43 1214 aa15.32■□□□□ 0.04
SPG7-209ENST00000564047 KIF2CQ99661 725 aa15.32■□□□□ 0.04
SPG7-209ENST00000564047 TRPM7Q96QT4 1865 aa15.31■□□□□ 0.04
SPG7-209ENST00000564047 POLR3DP05423 398 aaPredicted RBP15.31■□□□□ 0.04
SPG7-209ENST00000564047 TTC6Q86TZ1 520 aa15.31■□□□□ 0.04
SPG7-209ENST00000564047 FAM151AQ8WW52 585 aa15.31■□□□□ 0.04
SPG7-209ENST00000564047 CAPNS2Q96L46 248 aa15.31■□□□□ 0.04
SPG7-209ENST00000564047 TM6SF1Q9BZW5 370 aa15.31■□□□□ 0.04
SPG7-209ENST00000564047 NBPF3Q9H094 633 aa15.31■□□□□ 0.04
SPG7-209ENST00000564047 DHX36Q9H2U1 1008 aaKnown RBP15.31■□□□□ 0.04
SPG7-209ENST00000564047 SAP30BPQ9UHR5 308 aaKnown RBP15.31■□□□□ 0.04
SPG7-209ENST00000564047 TAF6LQ9Y6J9 622 aa15.31■□□□□ 0.04
SPG7-209ENST00000564047 COL2A1P02458 1487 aaPredicted RBP15.31■□□□□ 0.04
SPG7-209ENST00000564047 CASP8AP2Q9UKL3 1982 aa15.31■□□□□ 0.04
SPG7-209ENST00000564047 CYP2D7A0A087X1C5 515 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 TCP10L2B9ZVM9 353 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 E7EWF7 191 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 SLC3A2P08195 630 aaKnown RBP15.3■□□□□ 0.04
SPG7-209ENST00000564047 CYP2D6P10635 497 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 PCP11498 1178 aaKnown RBP15.3■□□□□ 0.04
SPG7-209ENST00000564047 PSMA5P28066 241 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 TNNI2P48788 182 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 HIRAP54198 1017 aaPredicted RBP15.3■□□□□ 0.04
SPG7-209ENST00000564047 TCP10Q12799 353 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 GRM1Q13255 1194 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 TNFAIP1Q13829 316 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 ATRNL1Q5VV63 1379 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 USP50Q70EL3 339 aaPredicted RBP15.3■□□□□ 0.04
SPG7-209ENST00000564047 TBC1D10CQ8IV04 446 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 IL27Q8NEV9 243 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 STAG1Q8WVM7 1258 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 ROBO3Q96MS0 1386 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 RNF41Q9H4P4 317 aaPredicted RBP15.3■□□□□ 0.04
SPG7-209ENST00000564047 VEZTQ9HBM0 779 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 TAOK2Q9UL54 1235 aa15.3■□□□□ 0.04
SPG7-209ENST00000564047 HLA-DOAP06340 250 aa15.29■□□□□ 0.04
SPG7-209ENST00000564047 FGRP09769 529 aa15.29■□□□□ 0.04
SPG7-209ENST00000564047 PLCD1P51178 756 aa15.29■□□□□ 0.04
SPG7-209ENST00000564047 CTDSPL2Q05D32 466 aa15.29■□□□□ 0.04
SPG7-209ENST00000564047 RABEP1Q15276 862 aa15.29■□□□□ 0.04
SPG7-209ENST00000564047 ADCK5Q3MIX3 580 aa15.29■□□□□ 0.04
SPG7-209ENST00000564047 AKNAD1Q5T1N1 836 aa15.29■□□□□ 0.04
SPG7-209ENST00000564047 STOX1Q6ZVD7 989 aa15.29■□□□□ 0.04
SPG7-209ENST00000564047 APOBEC3FQ8IUX4 373 aaKnown RBP15.29■□□□□ 0.04
SPG7-209ENST00000564047 ZFPM1Q8IX07 1006 aa15.29■□□□□ 0.04
SPG7-209ENST00000564047 NEK1Q96PY6 1258 aa15.29■□□□□ 0.04
SPG7-209ENST00000564047 DDX60LQ5H9U9 1706 aaKnown RBP15.29■□□□□ 0.04
SPG7-209ENST00000564047 ASTN2O75129 1339 aaPredicted RBP15.28■□□□□ 0.04
SPG7-209ENST00000564047 PITPNM2Q9BZ72 1349 aa15.28■□□□□ 0.04
SPG7-209ENST00000564047 HMGB1P09429 215 aaKnown RBP15.28■□□□□ 0.04
SPG7-209ENST00000564047 NT5C2P49902 561 aa15.28■□□□□ 0.04
SPG7-209ENST00000564047 TRDNQ13061 729 aa15.28■□□□□ 0.04
SPG7-209ENST00000564047 ANGEL2Q5VTE6 544 aaKnown RBP15.28■□□□□ 0.04
SPG7-209ENST00000564047 CYP4F22Q6NT55 531 aa15.28■□□□□ 0.04
SPG7-209ENST00000564047 MFSD6Q6ZSS7 791 aa15.28■□□□□ 0.04
SPG7-209ENST00000564047 SH3BP5LQ7L8J4 393 aa15.28■□□□□ 0.04
SPG7-209ENST00000564047 JAKMIP1Q96N16 626 aaKnown RBP15.28■□□□□ 0.04
SPG7-209ENST00000564047 EHD4Q9H223 541 aa15.28■□□□□ 0.04
SPG7-209ENST00000564047 CNNM2Q9H8M5 875 aa15.28■□□□□ 0.04
SPG7-209ENST00000564047 ZSWIM6Q9HCJ5 1215 aa15.28■□□□□ 0.04
SPG7-209ENST00000564047 FOCADQ5VW36 1801 aa15.28■□□□□ 0.04
SPG7-209ENST00000564047 NAV1Q8NEY1 1877 aa15.27■□□□□ 0.04
SPG7-209ENST00000564047 ECM29Q5VYK3 1845 aa15.27■□□□□ 0.04
SPG7-209ENST00000564047 DDTLA6NHG4 134 aaPredicted RBP15.27■□□□□ 0.04
SPG7-209ENST00000564047 SMIM22K7EJ46 135 aa15.27■□□□□ 0.04
SPG7-209ENST00000564047 CA12O43570 354 aa15.27■□□□□ 0.04
SPG7-209ENST00000564047 EVX2Q03828 476 aa15.27■□□□□ 0.04
SPG7-209ENST00000564047 PDE4BQ07343 736 aa15.27■□□□□ 0.04
SPG7-209ENST00000564047 RALYLQ86SE5 291 aaKnown RBP15.27■□□□□ 0.04
SPG7-209ENST00000564047 FOXP4Q8IVH2 680 aaPredicted RBP15.27■□□□□ 0.04
SPG7-209ENST00000564047 ZSCAN29Q8IWY8 852 aaPredicted RBP15.27■□□□□ 0.04
SPG7-209ENST00000564047 NCOA7Q8NI08 942 aa15.27■□□□□ 0.04
SPG7-209ENST00000564047 ZC3H15Q8WU90 426 aaKnown RBP15.27■□□□□ 0.04
SPG7-209ENST00000564047 KRT23Q9C075 422 aa15.27■□□□□ 0.04
SPG7-209ENST00000564047 MCOLN1Q9GZU1 580 aa15.27■□□□□ 0.04
SPG7-209ENST00000564047 ZNF287Q9HBT7 754 aa15.27■□□□□ 0.04
SPG7-209ENST00000564047 GGA3Q9NZ52 723 aa15.27■□□□□ 0.04
SPG7-209ENST00000564047 PI4KBQ9UBF8 816 aa15.27■□□□□ 0.04
SPG7-209ENST00000564047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.27■□□□□ 0.04
SPG7-209ENST00000564047 CDK5RAP2Q96SN8 1893 aa15.27■□□□□ 0.03
SPG7-209ENST00000564047 LAMA4Q16363 1823 aa15.27■□□□□ 0.03
SPG7-209ENST00000564047 ORC4O43929 436 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 CASTP20810 708 aaKnown RBP15.26■□□□□ 0.03
SPG7-209ENST00000564047 MAP2K2P36507 400 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 GABPAQ06546 454 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 RASA3Q14644 834 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 SLC4A8Q2Y0W8 1093 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 BLOC1S2Q6QNY1 142 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 C16orf86Q6ZW13 317 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 RUFY3Q7L099 469 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 SWAP70Q9UH65 585 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 PGAP2Q9UHJ9 254 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 SERPINB13Q9UIV8 391 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 TSKSQ9UJT2 592 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 PPP2R3BQ9Y5P8 575 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 CYP46A1Q9Y6A2 500 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 TACC3Q9Y6A5 838 aa15.26■□□□□ 0.03
SPG7-209ENST00000564047 NEDD4P46934 1319 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms