RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 CTU1Q7Z7A3 348 aaKnown RBP18.89■□□□□ 0.61
AC009088.3-201ENST00000563605 CRACR2BQ8N4Y2 399 aaPredicted RBP18.89■□□□□ 0.61
AC009088.3-201ENST00000563605 GPATCH3Q96I76 525 aa18.89■□□□□ 0.61
AC009088.3-201ENST00000563605 CFHR5Q9BXR6 569 aa18.89■□□□□ 0.61
AC009088.3-201ENST00000563605 CCDC85CA6NKD9 419 aa18.88■□□□□ 0.61
AC009088.3-201ENST00000563605 CHGBP05060 677 aa18.88■□□□□ 0.61
AC009088.3-201ENST00000563605 RRP1BQ14684 758 aaKnown RBP18.88■□□□□ 0.61
AC009088.3-201ENST00000563605 FOXP4Q8IVH2 680 aaPredicted RBP18.88■□□□□ 0.61
AC009088.3-201ENST00000563605 EXOC6Q8TAG9 804 aa18.88■□□□□ 0.61
AC009088.3-201ENST00000563605 RIOK1Q9BRS2 568 aaKnown RBP18.88■□□□□ 0.61
AC009088.3-201ENST00000563605 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.88■□□□□ 0.61
AC009088.3-201ENST00000563605 ZFYVE28Q9HCC9 887 aa18.88■□□□□ 0.61
AC009088.3-201ENST00000563605 ZBTB47Q9UFB7 747 aaPredicted RBP18.88■□□□□ 0.61
AC009088.3-201ENST00000563605 TCRBV5S4A2TA0A5A2 114 aa18.87■□□□□ 0.61
AC009088.3-201ENST00000563605 HLA-DOAP06340 250 aa18.87■□□□□ 0.61
AC009088.3-201ENST00000563605 ANKRD45Q5TZF3 282 aa18.87■□□□□ 0.61
AC009088.3-201ENST00000563605 CERS3Q8IU89 383 aa18.87■□□□□ 0.61
AC009088.3-201ENST00000563605 OTUD7AQ8TE49 926 aaPredicted RBP18.87■□□□□ 0.61
AC009088.3-201ENST00000563605 ARMT1Q9H993 441 aa18.87■□□□□ 0.61
AC009088.3-201ENST00000563605 HERC5Q9UII4 1024 aaKnown RBP18.87■□□□□ 0.61
AC009088.3-201ENST00000563605 KCNH4Q9UQ05 1017 aa18.87■□□□□ 0.61
AC009088.3-201ENST00000563605 MAST2Q6P0Q8 1798 aa18.86■□□□□ 0.61
AC009088.3-201ENST00000563605 TRIM75PA6NK02 468 aa18.86■□□□□ 0.61
AC009088.3-201ENST00000563605 CXCL11O14625 94 aa18.86■□□□□ 0.61
AC009088.3-201ENST00000563605 ADD2P35612 726 aa18.86■□□□□ 0.61
AC009088.3-201ENST00000563605 CAP2P40123 477 aa18.86■□□□□ 0.61
AC009088.3-201ENST00000563605 NOM1Q5C9Z4 860 aaKnown RBP18.86■□□□□ 0.61
AC009088.3-201ENST00000563605 TMED8Q6PL24 325 aaPredicted RBP18.86■□□□□ 0.61
AC009088.3-201ENST00000563605 GADL1Q6ZQY3 521 aa18.86■□□□□ 0.61
AC009088.3-201ENST00000563605 LCORLQ8N3X6 602 aa18.86■□□□□ 0.61
AC009088.3-201ENST00000563605 CRNKL1Q9BZJ0 848 aaKnown RBP18.86■□□□□ 0.61
AC009088.3-201ENST00000563605 AFG3L2Q9Y4W6 797 aa18.86■□□□□ 0.61
AC009088.3-201ENST00000563605 COL2A1P02458 1487 aaPredicted RBP18.85■□□□□ 0.61
AC009088.3-201ENST00000563605 PDHXO00330 501 aa18.85■□□□□ 0.61
AC009088.3-201ENST00000563605 ECM2O94769 699 aaPredicted RBP18.85■□□□□ 0.61
AC009088.3-201ENST00000563605 DOCK2Q92608 1830 aa18.85■□□□□ 0.61
AC009088.3-201ENST00000563605 MBD4O95243 580 aa18.84■□□□□ 0.61
AC009088.3-201ENST00000563605 GDF11O95390 407 aa18.84■□□□□ 0.61
AC009088.3-201ENST00000563605 POLR3DP05423 398 aaPredicted RBP18.84■□□□□ 0.61
AC009088.3-201ENST00000563605 SP3Q02447 781 aa18.84■□□□□ 0.61
AC009088.3-201ENST00000563605 CD99L2Q8TCZ2 262 aa18.84■□□□□ 0.61
AC009088.3-201ENST00000563605 SDR42E1Q8WUS8 393 aa18.84■□□□□ 0.61
AC009088.3-201ENST00000563605 DNAJC18Q9H819 358 aa18.84■□□□□ 0.61
AC009088.3-201ENST00000563605 PRKAB2O43741 272 aa18.83■□□□□ 0.6
AC009088.3-201ENST00000563605 IRX6P78412 446 aaPredicted RBP18.83■□□□□ 0.6
AC009088.3-201ENST00000563605 JAG1P78504 1218 aa18.83■□□□□ 0.6
AC009088.3-201ENST00000563605 SPP2Q13103 211 aa18.83■□□□□ 0.6
AC009088.3-201ENST00000563605 HDAC1Q13547 482 aaPredicted RBP18.83■□□□□ 0.6
AC009088.3-201ENST00000563605 MOGSQ13724 837 aa18.83■□□□□ 0.6
AC009088.3-201ENST00000563605 SHROOM1Q2M3G4 852 aaPredicted RBP18.83■□□□□ 0.6
AC009088.3-201ENST00000563605 ZSCAN25Q6NSZ9 544 aa18.83■□□□□ 0.6
AC009088.3-201ENST00000563605 ANKRD23Q86SG2 305 aa18.83■□□□□ 0.6
AC009088.3-201ENST00000563605 TTC6Q86TZ1 520 aa18.83■□□□□ 0.6
AC009088.3-201ENST00000563605 MCM9Q9NXL9 1143 aa18.83■□□□□ 0.6
AC009088.3-201ENST00000563605 TRIM17Q9Y577 477 aa18.83■□□□□ 0.6
AC009088.3-201ENST00000563605 PLCD1P51178 756 aa18.82■□□□□ 0.6
AC009088.3-201ENST00000563605 B4GALNT3Q6L9W6 998 aa18.82■□□□□ 0.6
AC009088.3-201ENST00000563605 GPAT2Q6NUI2 795 aa18.82■□□□□ 0.6
AC009088.3-201ENST00000563605 FASTKD5Q7L8L6 764 aaKnown RBP18.82■□□□□ 0.6
AC009088.3-201ENST00000563605 ERO1AQ96HE7 468 aa18.82■□□□□ 0.6
AC009088.3-201ENST00000563605 CPA4Q9UI42 421 aa18.82■□□□□ 0.6
AC009088.3-201ENST00000563605 A0A0G2JLL6 359 aaPredicted RBP18.81■□□□□ 0.6
AC009088.3-201ENST00000563605 USP17L5A8MUK1 530 aa18.81■□□□□ 0.6
AC009088.3-201ENST00000563605 TLR2O60603 784 aa18.81■□□□□ 0.6
AC009088.3-201ENST00000563605 UBE3CQ15386 1083 aa18.81■□□□□ 0.6
AC009088.3-201ENST00000563605 PRRT2Q7Z6L0 340 aaPredicted RBP18.81■□□□□ 0.6
AC009088.3-201ENST00000563605 METTL16Q86W50 562 aaKnown RBP18.81■□□□□ 0.6
AC009088.3-201ENST00000563605 ZNF280CQ8ND82 737 aa18.81■□□□□ 0.6
AC009088.3-201ENST00000563605 GCC1Q96CN9 775 aa18.81■□□□□ 0.6
AC009088.3-201ENST00000563605 RWDD1Q9H446 243 aaPredicted RBP18.81■□□□□ 0.6
AC009088.3-201ENST00000563605 ZCCHC17Q9NP64 241 aaKnown RBP18.81■□□□□ 0.6
AC009088.3-201ENST00000563605 SERPINB13Q9UIV8 391 aa18.81■□□□□ 0.6
AC009088.3-201ENST00000563605 ERC2O15083 957 aa18.8■□□□□ 0.6
AC009088.3-201ENST00000563605 CYP2C8P10632 490 aa18.8■□□□□ 0.6
AC009088.3-201ENST00000563605 CYP2D6P10635 497 aa18.8■□□□□ 0.6
AC009088.3-201ENST00000563605 MX1P20591 662 aa18.8■□□□□ 0.6
AC009088.3-201ENST00000563605 EVX2Q03828 476 aa18.8■□□□□ 0.6
AC009088.3-201ENST00000563605 AAMPQ13685 434 aa18.8■□□□□ 0.6
AC009088.3-201ENST00000563605 KBTBD3Q8NAB2 608 aa18.8■□□□□ 0.6
AC009088.3-201ENST00000563605 PUS7LQ9H0K6 701 aaKnown RBP18.8■□□□□ 0.6
AC009088.3-201ENST00000563605 DCP1AQ9NPI6 582 aaPredicted RBP18.8■□□□□ 0.6
AC009088.3-201ENST00000563605 TTC41PQ6P2S7 1318 aa18.79■□□□□ 0.6
AC009088.3-201ENST00000563605 IGHDP01880 384 aa18.79■□□□□ 0.6
AC009088.3-201ENST00000563605 ASNSP08243 561 aa18.79■□□□□ 0.6
AC009088.3-201ENST00000563605 PKN2Q16513 984 aaKnown RBP18.79■□□□□ 0.6
AC009088.3-201ENST00000563605 OTOP1Q7RTM1 612 aa18.79■□□□□ 0.6
AC009088.3-201ENST00000563605 PI4K2BQ8TCG2 481 aa18.79■□□□□ 0.6
AC009088.3-201ENST00000563605 EFCC1Q9HA90 598 aa18.79■□□□□ 0.6
AC009088.3-201ENST00000563605 AS3MTQ9HBK9 375 aa18.79■□□□□ 0.6
AC009088.3-201ENST00000563605 HPS5Q9UPZ3 1129 aa18.79■□□□□ 0.6
AC009088.3-201ENST00000563605 SLC4A4Q9Y6R1 1079 aa18.79■□□□□ 0.6
AC009088.3-201ENST00000563605 RNF113AO15541 343 aaKnown RBP18.78■□□□□ 0.6
AC009088.3-201ENST00000563605 GLRX3O76003 335 aaKnown RBP18.78■□□□□ 0.6
AC009088.3-201ENST00000563605 GH2P01242 217 aa18.78■□□□□ 0.6
AC009088.3-201ENST00000563605 HMGCS2P54868 508 aa18.78■□□□□ 0.6
AC009088.3-201ENST00000563605 CAP1Q01518 475 aa18.78■□□□□ 0.6
AC009088.3-201ENST00000563605 ZBTB21Q9ULJ3 1066 aa18.78■□□□□ 0.6
AC009088.3-201ENST00000563605 CERKLQ49MI3 558 aaPredicted RBP18.77■□□□□ 0.6
AC009088.3-201ENST00000563605 TREML2Q5T2D2 321 aa18.77■□□□□ 0.6
AC009088.3-201ENST00000563605 FBXO46Q6PJ61 603 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms