RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 AFG3L2Q9Y4W6 797 aa19.11■□□□□ 0.65
USB1-208ENST00000563207 RBBP6Q7Z6E9 1792 aaKnown RBP19.11■□□□□ 0.65
USB1-208ENST00000563207 UQCRFS1P1P0C7P4 283 aa19.1■□□□□ 0.65
USB1-208ENST00000563207 ZAP70P43403 619 aa19.1■□□□□ 0.65
USB1-208ENST00000563207 SH3TC2Q8TF17 1288 aa19.1■□□□□ 0.65
USB1-208ENST00000563207 PIH1D3Q9NQM4 214 aaKnown RBP19.1■□□□□ 0.65
USB1-208ENST00000563207 ATAD5Q96QE3 1844 aa19.09■□□□□ 0.65
USB1-208ENST00000563207 ZNF333Q96JL9 665 aa19.09■□□□□ 0.65
USB1-208ENST00000563207 TRIM47Q96LD4 638 aa19.09■□□□□ 0.65
USB1-208ENST00000563207 OSBPL5Q9H0X9 879 aaPredicted RBP19.09■□□□□ 0.65
USB1-208ENST00000563207 PICK1Q9NRD5 415 aa19.09■□□□□ 0.65
USB1-208ENST00000563207 AATFQ9NY61 560 aaKnown RBP eCLIP19.09■□□□□ 0.65
USB1-208ENST00000563207 PDE4DIPQ5VU43 2346 aa19.09■□□□□ 0.65
USB1-208ENST00000563207 MAST2Q6P0Q8 1798 aa19.09■□□□□ 0.65
USB1-208ENST00000563207 A0A0G2JLL6 359 aaPredicted RBP19.08■□□□□ 0.64
USB1-208ENST00000563207 TRIM75PA6NK02 468 aa19.08■□□□□ 0.64
USB1-208ENST00000563207 CXCL11O14625 94 aa19.08■□□□□ 0.64
USB1-208ENST00000563207 LDHCP07864 332 aa19.08■□□□□ 0.64
USB1-208ENST00000563207 GSTO1P78417 241 aa19.08■□□□□ 0.64
USB1-208ENST00000563207 JAG1P78504 1218 aa19.08■□□□□ 0.64
USB1-208ENST00000563207 SHROOM1Q2M3G4 852 aaPredicted RBP19.08■□□□□ 0.64
USB1-208ENST00000563207 GADL1Q6ZQY3 521 aa19.08■□□□□ 0.64
USB1-208ENST00000563207 PRRT2Q7Z6L0 340 aaPredicted RBP19.08■□□□□ 0.64
USB1-208ENST00000563207 TEX11Q8IYF3 940 aa19.08■□□□□ 0.64
USB1-208ENST00000563207 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.08■□□□□ 0.64
USB1-208ENST00000563207 CTNND1O60716 968 aaKnown RBP19.07■□□□□ 0.64
USB1-208ENST00000563207 PSMC4P43686 418 aa19.07■□□□□ 0.64
USB1-208ENST00000563207 SLC9C1Q4G0N8 1177 aa19.07■□□□□ 0.64
USB1-208ENST00000563207 CCDC158Q5M9N0 1113 aa19.07■□□□□ 0.64
USB1-208ENST00000563207 ERICH6BQ5W0A0 696 aa19.07■□□□□ 0.64
USB1-208ENST00000563207 NAA16Q6N069 864 aaPredicted RBP19.07■□□□□ 0.64
USB1-208ENST00000563207 MGAMO43451 1857 aa19.07■□□□□ 0.64
USB1-208ENST00000563207 APBB1O00213 710 aa19.06■□□□□ 0.64
USB1-208ENST00000563207 DYNLL1P63167 89 aaKnown RBP19.06■□□□□ 0.64
USB1-208ENST00000563207 TGFBRAP1Q8WUH2 860 aa19.06■□□□□ 0.64
USB1-208ENST00000563207 ANTXR1Q9H6X2 564 aa19.06■□□□□ 0.64
USB1-208ENST00000563207 IL1RAPL2Q9NP60 686 aa19.06■□□□□ 0.64
USB1-208ENST00000563207 ZBTB47Q9UFB7 747 aaPredicted RBP19.06■□□□□ 0.64
USB1-208ENST00000563207 FOCADQ5VW36 1801 aa19.06■□□□□ 0.64
USB1-208ENST00000563207 TBC1D12O60347 775 aa19.05■□□□□ 0.64
USB1-208ENST00000563207 NPM3O75607 178 aaKnown RBP19.05■□□□□ 0.64
USB1-208ENST00000563207 IFIT2P09913 472 aaKnown RBP19.05■□□□□ 0.64
USB1-208ENST00000563207 BCRP11274 1271 aa19.05■□□□□ 0.64
USB1-208ENST00000563207 OSBPP22059 807 aa19.05■□□□□ 0.64
USB1-208ENST00000563207 KIF22Q14807 665 aa19.05■□□□□ 0.64
USB1-208ENST00000563207 SLC4A8Q2Y0W8 1093 aa19.05■□□□□ 0.64
USB1-208ENST00000563207 TREML2Q5T2D2 321 aa19.05■□□□□ 0.64
USB1-208ENST00000563207 AACSQ86V21 672 aa19.05■□□□□ 0.64
USB1-208ENST00000563207 MAPKAPK5Q8IW41 473 aa19.05■□□□□ 0.64
USB1-208ENST00000563207 SMC5Q8IY18 1101 aa19.05■□□□□ 0.64
USB1-208ENST00000563207 ZNF512BQ96KM6 892 aaPredicted RBP19.05■□□□□ 0.64
USB1-208ENST00000563207 KIAA0100Q14667 2235 aaKnown RBP19.04■□□□□ 0.64
USB1-208ENST00000563207 MTFR1Q15390 333 aa19.04■□□□□ 0.64
USB1-208ENST00000563207 DNAJC18Q9H819 358 aa19.04■□□□□ 0.64
USB1-208ENST00000563207 GABRQQ9UN88 632 aa19.04■□□□□ 0.64
USB1-208ENST00000563207 FMNL1O95466 1100 aaPredicted RBP19.03■□□□□ 0.64
USB1-208ENST00000563207 IGHDP01880 384 aa19.03■□□□□ 0.64
USB1-208ENST00000563207 PPP4CP60510 307 aa19.03■□□□□ 0.64
USB1-208ENST00000563207 SPP2Q13103 211 aa19.03■□□□□ 0.64
USB1-208ENST00000563207 ARHGEF6Q15052 776 aa19.03■□□□□ 0.64
USB1-208ENST00000563207 BCL11AQ9H165 835 aa19.03■□□□□ 0.64
USB1-208ENST00000563207 SRRDQ9UH36 339 aa19.03■□□□□ 0.64
USB1-208ENST00000563207 SAP30BPQ9UHR5 308 aaKnown RBP19.03■□□□□ 0.64
USB1-208ENST00000563207 PALD1Q9ULE6 856 aa19.03■□□□□ 0.64
USB1-208ENST00000563207 COL2A1P02458 1487 aaPredicted RBP19.03■□□□□ 0.64
USB1-208ENST00000563207 PRPF38BQ5VTL8 546 aaKnown RBP19.02■□□□□ 0.64
USB1-208ENST00000563207 FASTKD5Q7L8L6 764 aaKnown RBP19.02■□□□□ 0.64
USB1-208ENST00000563207 MIGA1Q8NAN2 632 aa19.02■□□□□ 0.64
USB1-208ENST00000563207 PARK7Q99497 189 aaKnown RBP19.02■□□□□ 0.64
USB1-208ENST00000563207 FLT1P17948 1338 aa19.01■□□□□ 0.63
USB1-208ENST00000563207 IDH1O75874 414 aaKnown RBP19.01■□□□□ 0.63
USB1-208ENST00000563207 SLC34A2O95436 690 aa19.01■□□□□ 0.63
USB1-208ENST00000563207 CYP7A1P22680 504 aa19.01■□□□□ 0.63
USB1-208ENST00000563207 CAP2P40123 477 aa19.01■□□□□ 0.63
USB1-208ENST00000563207 PRKCZQ05513 592 aa19.01■□□□□ 0.63
USB1-208ENST00000563207 ANKRD45Q5TZF3 282 aa19.01■□□□□ 0.63
USB1-208ENST00000563207 NOL10Q9BSC4 688 aaKnown RBP19.01■□□□□ 0.63
USB1-208ENST00000563207 LOC285556D6RIA3 1793 aa19.01■□□□□ 0.63
USB1-208ENST00000563207 MYPNQ86TC9 1320 aa19■□□□□ 0.63
USB1-208ENST00000563207 SMARCA5O60264 1052 aaPredicted RBP19■□□□□ 0.63
USB1-208ENST00000563207 PEX10O60683 326 aa19■□□□□ 0.63
USB1-208ENST00000563207 BAG3O95817 575 aa19■□□□□ 0.63
USB1-208ENST00000563207 MAP4K4O95819 1239 aaPredicted RBP19■□□□□ 0.63
USB1-208ENST00000563207 NBPF11Q86T75 865 aa19■□□□□ 0.63
USB1-208ENST00000563207 MAGEB6Q8N7X4 407 aa19■□□□□ 0.63
USB1-208ENST00000563207 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19■□□□□ 0.63
USB1-208ENST00000563207 GPATCH3Q96I76 525 aa19■□□□□ 0.63
USB1-208ENST00000563207 TMEM106CQ9BVX2 250 aa19■□□□□ 0.63
USB1-208ENST00000563207 IGSF3O75054 1194 aa18.99■□□□□ 0.63
USB1-208ENST00000563207 HMGCS2P54868 508 aa18.99■□□□□ 0.63
USB1-208ENST00000563207 ANKRD13CQ8N6S4 541 aa18.99■□□□□ 0.63
USB1-208ENST00000563207 ZNF280CQ8ND82 737 aa18.99■□□□□ 0.63
USB1-208ENST00000563207 PI4KBQ9UBF8 816 aa18.99■□□□□ 0.63
USB1-208ENST00000563207 AGTPBP1Q9UPW5 1226 aa18.99■□□□□ 0.63
USB1-208ENST00000563207 MYH1P12882 1939 aa18.99■□□□□ 0.63
USB1-208ENST00000563207 GDF11O95390 407 aa18.98■□□□□ 0.63
USB1-208ENST00000563207 GNRH1P01148 92 aa18.98■□□□□ 0.63
USB1-208ENST00000563207 EVX2Q03828 476 aa18.98■□□□□ 0.63
USB1-208ENST00000563207 DOCK3Q8IZD9 2030 aa18.98■□□□□ 0.63
USB1-208ENST00000563207 NUCB1Q02818 461 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms