RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 FAM196BA6NMK8 535 aa20.43■□□□□ 0.86
CMTM3-205ENST00000562707 GNAI2P04899 355 aa20.43■□□□□ 0.86
CMTM3-205ENST00000562707 TREML2Q5T2D2 321 aa20.43■□□□□ 0.86
CMTM3-205ENST00000562707 ZNF280CQ8ND82 737 aa20.43■□□□□ 0.86
CMTM3-205ENST00000562707 NOL10Q9BSC4 688 aaKnown RBP20.43■□□□□ 0.86
CMTM3-205ENST00000562707 LRP2BPQ9P2M1 347 aa20.43■□□□□ 0.86
CMTM3-205ENST00000562707 RBM27Q9P2N5 1060 aaKnown RBP20.43■□□□□ 0.86
CMTM3-205ENST00000562707 UQCRFS1P1P0C7P4 283 aa20.42■□□□□ 0.86
CMTM3-205ENST00000562707 ARID4AP29374 1257 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-205ENST00000562707 GCLCP48506 637 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-205ENST00000562707 FAM110CQ1W6H9 321 aa20.42■□□□□ 0.86
CMTM3-205ENST00000562707 PI16Q6UXB8 463 aa20.42■□□□□ 0.86
CMTM3-205ENST00000562707 TEX11Q8IYF3 940 aa20.42■□□□□ 0.86
CMTM3-205ENST00000562707 DEFB118Q96PH6 123 aa20.42■□□□□ 0.86
CMTM3-205ENST00000562707 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-205ENST00000562707 USP17L5A8MUK1 530 aa20.41■□□□□ 0.86
CMTM3-205ENST00000562707 CAP2P40123 477 aa20.41■□□□□ 0.86
CMTM3-205ENST00000562707 AS3MTQ9HBK9 375 aa20.41■□□□□ 0.86
CMTM3-205ENST00000562707 HERC5Q9UII4 1024 aaKnown RBP20.41■□□□□ 0.86
CMTM3-205ENST00000562707 EVI5O60447 810 aa20.4■□□□□ 0.86
CMTM3-205ENST00000562707 ZBTB7BO15156 539 aaPredicted RBP20.39■□□□□ 0.85
CMTM3-205ENST00000562707 BAG3O95817 575 aa20.39■□□□□ 0.85
CMTM3-205ENST00000562707 HMGCS2P54868 508 aa20.39■□□□□ 0.85
CMTM3-205ENST00000562707 FRAT1Q92837 279 aaPredicted RBP20.39■□□□□ 0.85
CMTM3-205ENST00000562707 PI4KBQ9UBF8 816 aa20.39■□□□□ 0.85
CMTM3-205ENST00000562707 COL2A1P02458 1487 aaPredicted RBP20.38■□□□□ 0.85
CMTM3-205ENST00000562707 MYH2Q9UKX2 1941 aa20.38■□□□□ 0.85
CMTM3-205ENST00000562707 MCAMP43121 646 aa20.38■□□□□ 0.85
CMTM3-205ENST00000562707 ATF7IPQ6VMQ6 1270 aa20.38■□□□□ 0.85
CMTM3-205ENST00000562707 SH3RF3Q8TEJ3 882 aaPredicted RBP20.38■□□□□ 0.85
CMTM3-205ENST00000562707 DHX36Q9H2U1 1008 aaKnown RBP20.38■□□□□ 0.85
CMTM3-205ENST00000562707 PAK6Q9NQU5 681 aaPredicted RBP20.38■□□□□ 0.85
CMTM3-205ENST00000562707 DOCK2Q92608 1830 aa20.38■□□□□ 0.85
CMTM3-205ENST00000562707 PNMA6EA0A0J9YXQ4 647 aa20.37■□□□□ 0.85
CMTM3-205ENST00000562707 TRIM27P14373 513 aa20.37■□□□□ 0.85
CMTM3-205ENST00000562707 PLCG2P16885 1265 aa20.37■□□□□ 0.85
CMTM3-205ENST00000562707 SH3D19Q5HYK7 790 aa20.37■□□□□ 0.85
CMTM3-205ENST00000562707 CCDC158Q5M9N0 1113 aa20.37■□□□□ 0.85
CMTM3-205ENST00000562707 TTC39AQ5SRH9 613 aa20.37■□□□□ 0.85
CMTM3-205ENST00000562707 NAA16Q6N069 864 aaPredicted RBP20.37■□□□□ 0.85
CMTM3-205ENST00000562707 CRISPLD2Q9H0B8 497 aa20.37■□□□□ 0.85
CMTM3-205ENST00000562707 ASCC2Q9H1I8 757 aaPredicted RBP20.37■□□□□ 0.85
CMTM3-205ENST00000562707 RRP1BQ14684 758 aaKnown RBP20.36■□□□□ 0.85
CMTM3-205ENST00000562707 CLUAP1Q96AJ1 413 aa20.36■□□□□ 0.85
CMTM3-205ENST00000562707 TRIM34Q9BYJ4 488 aa20.36■□□□□ 0.85
CMTM3-205ENST00000562707 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.36■□□□□ 0.856e-8■■■■■ 50.5
CMTM3-205ENST00000562707 SNRKQ9NRH2 765 aa20.36■□□□□ 0.85
CMTM3-205ENST00000562707 AATFQ9NY61 560 aaKnown RBP eCLIP20.36■□□□□ 0.85
CMTM3-205ENST00000562707 TMOD4Q9NZQ9 345 aa20.36■□□□□ 0.85
CMTM3-205ENST00000562707 CCER2I3L3R5 266 aa20.35■□□□□ 0.85
CMTM3-205ENST00000562707 HMGCRP04035 888 aa20.35■□□□□ 0.85
CMTM3-205ENST00000562707 ASNSP08243 561 aa20.35■□□□□ 0.85
CMTM3-205ENST00000562707 IRX3P78415 501 aaPredicted RBP20.35■□□□□ 0.85
CMTM3-205ENST00000562707 OS9Q13438 667 aaPredicted RBP20.35■□□□□ 0.85
CMTM3-205ENST00000562707 NECAB2Q7Z6G3 386 aa20.35■□□□□ 0.85
CMTM3-205ENST00000562707 FOXP4Q8IVH2 680 aaPredicted RBP20.35■□□□□ 0.85
CMTM3-205ENST00000562707 PAWRQ96IZ0 340 aaKnown RBP20.35■□□□□ 0.85
CMTM3-205ENST00000562707 WDR18Q9BV38 432 aa20.35■□□□□ 0.85
CMTM3-205ENST00000562707 PRO3102Q9H379 93 aa20.35■□□□□ 0.85
CMTM3-205ENST00000562707 GPR108Q9NPR9 543 aa20.35■□□□□ 0.85
CMTM3-205ENST00000562707 BCAR3O75815 825 aa20.34■□□□□ 0.85
CMTM3-205ENST00000562707 BACE1P56817 501 aa20.34■□□□□ 0.85
CMTM3-205ENST00000562707 PPP4CP60510 307 aa20.34■□□□□ 0.85
CMTM3-205ENST00000562707 CRACR2BQ8N4Y2 399 aaPredicted RBP20.34■□□□□ 0.85
CMTM3-205ENST00000562707 TGFBRAP1Q8WUH2 860 aa20.34■□□□□ 0.85
CMTM3-205ENST00000562707 HMX1Q9NP08 348 aaPredicted RBP20.34■□□□□ 0.85
CMTM3-205ENST00000562707 GJD2Q9UKL4 321 aa20.34■□□□□ 0.85
CMTM3-205ENST00000562707 TNNQ9UQP3 1299 aa20.34■□□□□ 0.85
CMTM3-205ENST00000562707 DOCK1Q14185 1865 aa20.33■□□□□ 0.85
CMTM3-205ENST00000562707 MTMR2Q13614 643 aa20.33■□□□□ 0.85
CMTM3-205ENST00000562707 TNNI3KQ59H18 835 aa20.33■□□□□ 0.85
CMTM3-205ENST00000562707 MAPKAPK5Q8IW41 473 aa20.33■□□□□ 0.85
CMTM3-205ENST00000562707 ANKLE1Q8NAG6 615 aa20.33■□□□□ 0.85
CMTM3-205ENST00000562707 MORF4L1Q9UBU8 362 aa20.33■□□□□ 0.85
CMTM3-205ENST00000562707 FPGT-TNNI3KV9GXZ4 949 aa20.33■□□□□ 0.85
CMTM3-205ENST00000562707 RPTORQ8N122 1335 aa20.32■□□□□ 0.84
CMTM3-205ENST00000562707 A0A1W2PPC1 479 aa20.32■□□□□ 0.84
CMTM3-205ENST00000562707 C19orf81C9J6K1 198 aa20.32■□□□□ 0.84
CMTM3-205ENST00000562707 IGSF3O75054 1194 aa20.32■□□□□ 0.84
CMTM3-205ENST00000562707 HOXA7P31268 230 aaPredicted RBP20.32■□□□□ 0.84
CMTM3-205ENST00000562707 DBNDD2Q9BQY9 259 aa20.32■□□□□ 0.84
CMTM3-205ENST00000562707 GINM1Q9NU53 330 aa20.32■□□□□ 0.84
CMTM3-205ENST00000562707 P2RX7Q99572 595 aaKnown RBP20.31■□□□□ 0.84
CMTM3-205ENST00000562707 PALD1Q9ULE6 856 aa20.31■□□□□ 0.84
CMTM3-205ENST00000562707 CEP290O15078 2479 aa20.31■□□□□ 0.84
CMTM3-205ENST00000562707 FLT1P17948 1338 aa20.3■□□□□ 0.84
CMTM3-205ENST00000562707 USP17L10C9JJH3 530 aa20.3■□□□□ 0.84
CMTM3-205ENST00000562707 SURF6O75683 361 aaKnown RBP20.3■□□□□ 0.84
CMTM3-205ENST00000562707 CYP2E1P05181 493 aaPredicted RBP20.3■□□□□ 0.84
CMTM3-205ENST00000562707 HLA-DOAP06340 250 aa20.3■□□□□ 0.84
CMTM3-205ENST00000562707 ATP8B2P98198 1209 aa20.3■□□□□ 0.84
CMTM3-205ENST00000562707 POLA2Q14181 598 aa20.3■□□□□ 0.84
CMTM3-205ENST00000562707 ZKSCAN2Q63HK3 967 aa20.3■□□□□ 0.84
CMTM3-205ENST00000562707 METTL16Q86W50 562 aaKnown RBP20.3■□□□□ 0.84
CMTM3-205ENST00000562707 CCAR1Q8IX12 1150 aaKnown RBP20.3■□□□□ 0.84
CMTM3-205ENST00000562707 TMEM57Q8N5G2 664 aa20.3■□□□□ 0.84
CMTM3-205ENST00000562707 GPRC5AQ8NFJ5 357 aa20.3■□□□□ 0.84
CMTM3-205ENST00000562707 DIS3LQ8TF46 1054 aaKnown RBP20.3■□□□□ 0.84
CMTM3-205ENST00000562707 ZNF512BQ96KM6 892 aaPredicted RBP20.3■□□□□ 0.84
CMTM3-205ENST00000562707 STAP2Q9UGK3 403 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms