RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SRGAP1Q7Z6B7 1085 aa15.99■□□□□ 0.15
GTF3C1-203ENST00000562609 TTLL11Q8NHH1 800 aa15.99■□□□□ 0.15
GTF3C1-203ENST00000562609 CLIC6Q96NY7 704 aa15.99■□□□□ 0.15
GTF3C1-203ENST00000562609 TRIM28Q13263 835 aaKnown RBP15.99■□□□□ 0.15
GTF3C1-203ENST00000562609 LRCH2Q5VUJ6 765 aa15.99■□□□□ 0.15
GTF3C1-203ENST00000562609 SMIM5Q71RC9 77 aa15.99■□□□□ 0.15
GTF3C1-203ENST00000562609 BPIFA3Q9BQP9 254 aa15.99■□□□□ 0.15
GTF3C1-203ENST00000562609 RAB21Q9UL25 225 aa15.99■□□□□ 0.15
GTF3C1-203ENST00000562609 UBN2Q6ZU65 1347 aa15.98■□□□□ 0.15
GTF3C1-203ENST00000562609 SNAP23O00161 211 aa15.98■□□□□ 0.15
GTF3C1-203ENST00000562609 CYP21A2P08686 494 aa15.98■□□□□ 0.15
GTF3C1-203ENST00000562609 NCAPHQ15003 741 aa15.98■□□□□ 0.15
GTF3C1-203ENST00000562609 HELBQ8NG08 1087 aaPredicted RBP15.98■□□□□ 0.15
GTF3C1-203ENST00000562609 DPF2Q92785 391 aa15.98■□□□□ 0.15
GTF3C1-203ENST00000562609 JPH2Q9BR39 696 aaPredicted RBP15.98■□□□□ 0.15
GTF3C1-203ENST00000562609 RAI14Q9P0K7 980 aa15.98■□□□□ 0.15
GTF3C1-203ENST00000562609 GOLGA6L9A6NEM1 432 aa15.98■□□□□ 0.15
GTF3C1-203ENST00000562609 CUTAO60888 179 aa15.98■□□□□ 0.15
GTF3C1-203ENST00000562609 USP28Q96RU2 1077 aa15.98■□□□□ 0.15
GTF3C1-203ENST00000562609 KIAA1468Q9P260 1216 aa15.98■□□□□ 0.15
GTF3C1-203ENST00000562609 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.98■□□□□ 0.15
GTF3C1-203ENST00000562609 UBASH3AP57075 661 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 KARSQ15046 597 aaKnown RBP15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 CFAP100Q494V2 611 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 METTL24Q5JXM2 366 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 AFAP1L1Q8TED9 768 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 POTEB2H3BUK9 544 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 RNF40O75150 1001 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 SERPINC1P01008 464 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 CSF1RP07333 972 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 RHOXF2BP0C7M4 288 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 TTC39AQ5SRH9 613 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 GBP6Q6ZN66 633 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 TMEM139Q8IV31 216 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 RHOXF2Q9BQY4 288 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 CNNM1Q9NRU3 951 aa15.97■□□□□ 0.15
GTF3C1-203ENST00000562609 A0A1B0GVL5 298 aa15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 CIAO1O76071 339 aa15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 TOP1P11387 765 aaKnown RBP15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 RPS6KB1P23443 525 aa15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 TRDNQ13061 729 aa15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 TOGARAM2Q6ZUX3 1019 aa15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 FMR1NBQ8N0W7 255 aaPredicted RBP15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 GIMAP7Q8NHV1 300 aa15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 FAM169AQ9Y6X4 670 aa15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 EP400Q96L91 3159 aa15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 PPFIA3O75145 1194 aa15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 CCT5P48643 541 aa15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 VSNL1P62760 191 aa15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 ITPK1Q13572 414 aa15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 FAM98CQ17RN3 349 aaKnown RBP15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 MSANTD4Q8NCY6 345 aa15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 IRX2Q9BZI1 471 aaPredicted RBP15.96■□□□□ 0.15
GTF3C1-203ENST00000562609 LRRIQ3A6PVS8 624 aaPredicted RBP15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 CRKLP46109 303 aaKnown RBP15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 CTSWP56202 376 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 GPR108Q9NPR9 543 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 LOC102724428A0A0B4J2F2 783 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 PPP1R12AO14974 1030 aaPredicted RBP15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 ZAP70P43403 619 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 SIK1P57059 783 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 SETQ01105 290 aaPredicted RBP15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 STOX1Q6ZVD7 989 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 CHST3Q7LGC8 479 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 MRPS27Q92552 414 aaKnown RBP15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 BAG1Q99933 345 aaPredicted RBP15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 ACBD3Q9H3P7 528 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 DOT1LQ8TEK3 1739 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 TMEM232C9JQI7 657 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 WASHC4Q2M389 1173 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 FAM182BQ5T319 152 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 INTS5Q6P9B9 1019 aaKnown RBP15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 CPLX2Q6PUV4 134 aaKnown RBP15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 PTF1AQ7RTS3 328 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 RNF217Q8TC41 542 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 SGSM3Q96HU1 749 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 DESI2Q9BSY9 194 aa15.95■□□□□ 0.14
GTF3C1-203ENST00000562609 M0R2C6 588 aa15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 IL6STP40189 918 aaPredicted RBP15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 VSTM4Q8IW00 320 aa15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 OSBP2Q969R2 916 aa15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 C8orf37Q96NL8 207 aa15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 NEK1Q96PY6 1258 aa15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 GNL3LQ9NVN8 582 aaKnown RBP15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 RIPOR2Q9Y4F9 1068 aa15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 MAST3O60307 1309 aa15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 EBAG9O00559 213 aa15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 NDUFA8P51970 172 aa15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 SUSD4Q5VX71 490 aa15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 USPL1Q5W0Q7 1092 aa15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 PDILTQ8N807 584 aa15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 CEP112Q8N8E3 955 aa15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 AHDC1Q5TGY3 1603 aaPredicted RBP15.94■□□□□ 0.14
GTF3C1-203ENST00000562609 ANKRD18BA2A2Z9 1011 aa15.93■□□□□ 0.14
GTF3C1-203ENST00000562609 CBFA2T2O43439 604 aa15.93■□□□□ 0.14
GTF3C1-203ENST00000562609 NLRP12P59046 1061 aa15.93■□□□□ 0.14
GTF3C1-203ENST00000562609 SCRN1Q12765 414 aa15.93■□□□□ 0.14
GTF3C1-203ENST00000562609 PLA2G12BQ9BX93 195 aa15.93■□□□□ 0.14
GTF3C1-203ENST00000562609 HSD3B7Q9H2F3 369 aa15.93■□□□□ 0.14
GTF3C1-203ENST00000562609 HSPD1P10809 573 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms