RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 GPBP1L1Q9HC44 474 aaPredicted RBP13.84□□□□□ -0.19
HERC1-214ENST00000561400 RPAP1Q9BWH6 1393 aaPredicted RBP13.84□□□□□ -0.19
HERC1-214ENST00000561400 SMIM22K7EJ46 135 aa13.84□□□□□ -0.19
HERC1-214ENST00000561400 KIF20AO95235 890 aa13.84□□□□□ -0.19
HERC1-214ENST00000561400 PTMSP20962 102 aa13.84□□□□□ -0.19
HERC1-214ENST00000561400 EVX2Q03828 476 aa13.84□□□□□ -0.19
HERC1-214ENST00000561400 GIMAP6Q6P9H5 292 aa13.84□□□□□ -0.19
HERC1-214ENST00000561400 SH3BP5LQ7L8J4 393 aa13.84□□□□□ -0.19
HERC1-214ENST00000561400 BACH2Q9BYV9 841 aa13.84□□□□□ -0.19
HERC1-214ENST00000561400 MCM9Q9NXL9 1143 aa13.84□□□□□ -0.19
HERC1-214ENST00000561400 SAP30BPQ9UHR5 308 aaKnown RBP13.84□□□□□ -0.19
HERC1-214ENST00000561400 PALD1Q9ULE6 856 aa13.84□□□□□ -0.19
HERC1-214ENST00000561400 SIPA1L1O43166 1804 aa13.84□□□□□ -0.19
HERC1-214ENST00000561400 PITPNM2Q9BZ72 1349 aa13.83□□□□□ -0.19
HERC1-214ENST00000561400 USP17L12C9JPN9 530 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 USP17L21D6R901 530 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 ENTPD3O75355 529 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 REC8O95072 547 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 RASA3Q14644 834 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 ALX1Q15699 326 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 SLC4A8Q2Y0W8 1093 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 FAM83AQ86UY5 434 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 CDAN1Q8IWY9 1227 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 FAM151AQ8WW52 585 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 TMEM39BQ9GZU3 492 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 DEFB129Q9H1M3 183 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 LAMB1P07942 1786 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 LAMA4Q16363 1823 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 CYP2D7A0A087X1C5 515 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 DDTLA6NHG4 134 aaPredicted RBP13.83□□□□□ -0.2
HERC1-214ENST00000561400 TDO2P48775 406 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 CTR9Q6PD62 1173 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 DLK2Q6UY11 383 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 APOBEC3FQ8IUX4 373 aaKnown RBP13.83□□□□□ -0.2
HERC1-214ENST00000561400 DCPSQ96C86 337 aaKnown RBP13.83□□□□□ -0.2
HERC1-214ENST00000561400 NACAP1Q9BZK3 213 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 NAPBQ9H115 298 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
HERC1-214ENST00000561400 CYP2D6P10635 497 aa13.82□□□□□ -0.2
HERC1-214ENST00000561400 TNFAIP1Q13829 316 aa13.82□□□□□ -0.2
HERC1-214ENST00000561400 TEPSINQ96N21 525 aa13.82□□□□□ -0.2
HERC1-214ENST00000561400 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
HERC1-214ENST00000561400 RBM8AQ9Y5S9 174 aaKnown RBP13.82□□□□□ -0.2
HERC1-214ENST00000561400 KIF3CO14782 793 aa13.82□□□□□ -0.2
HERC1-214ENST00000561400 TNNI2P48788 182 aa13.82□□□□□ -0.2
HERC1-214ENST00000561400 PLCD1P51178 756 aa13.82□□□□□ -0.2
HERC1-214ENST00000561400 PRAMEF18Q5VWM3 479 aa13.82□□□□□ -0.2
HERC1-214ENST00000561400 MAP1SQ66K74 1059 aaPredicted RBP13.82□□□□□ -0.2
HERC1-214ENST00000561400 ATRNL1Q5VV63 1379 aa13.82□□□□□ -0.2
HERC1-214ENST00000561400 ZMYM6O95789 1325 aa13.81□□□□□ -0.2
HERC1-214ENST00000561400 ADM5C9JUS6 153 aa13.81□□□□□ -0.2
HERC1-214ENST00000561400 SLURP2P0DP57 97 aa13.81□□□□□ -0.2
HERC1-214ENST00000561400 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
HERC1-214ENST00000561400 SBK1Q52WX2 424 aa13.81□□□□□ -0.2
HERC1-214ENST00000561400 TAF3Q5VWG9 929 aa13.81□□□□□ -0.2
HERC1-214ENST00000561400 KRT26Q7Z3Y9 468 aa13.81□□□□□ -0.2
HERC1-214ENST00000561400 LDHDQ86WU2 507 aa13.81□□□□□ -0.2
HERC1-214ENST00000561400 ZSCAN29Q8IWY8 852 aaPredicted RBP13.81□□□□□ -0.2
HERC1-214ENST00000561400 ZNF784Q8NCA9 323 aaPredicted RBP13.81□□□□□ -0.2
HERC1-214ENST00000561400 COL2A1P02458 1487 aaPredicted RBP13.81□□□□□ -0.2
HERC1-214ENST00000561400 MINDY4BA8MYZ0 360 aa13.8□□□□□ -0.2
HERC1-214ENST00000561400 NECTIN1Q15223 517 aa13.8□□□□□ -0.2
HERC1-214ENST00000561400 C12orf60Q5U649 245 aa13.8□□□□□ -0.2
HERC1-214ENST00000561400 SULF1Q8IWU6 871 aa13.8□□□□□ -0.2
HERC1-214ENST00000561400 GLIS2Q9BZE0 524 aaPredicted RBP13.8□□□□□ -0.2
HERC1-214ENST00000561400 ARPP21Q9UBL0 812 aaPredicted RBP13.8□□□□□ -0.2
HERC1-214ENST00000561400 U3KPZ7 1027 aaPredicted RBP13.8□□□□□ -0.2
HERC1-214ENST00000561400 POLR3DP05423 398 aaPredicted RBP13.8□□□□□ -0.2
HERC1-214ENST00000561400 HAND2P61296 217 aa13.8□□□□□ -0.2
HERC1-214ENST00000561400 USP48Q86UV5 1035 aa13.8□□□□□ -0.2
HERC1-214ENST00000561400 TAF6LQ9Y6J9 622 aa13.8□□□□□ -0.2
HERC1-214ENST00000561400 CYP21A2P08686 494 aa13.79□□□□□ -0.2
HERC1-214ENST00000561400 NFKBIBQ15653 356 aa13.79□□□□□ -0.2
HERC1-214ENST00000561400 NBPF12Q5TAG4 269 aaPredicted RBP13.79□□□□□ -0.2
HERC1-214ENST00000561400 CSRNP1Q96S65 589 aa13.79□□□□□ -0.2
HERC1-214ENST00000561400 NBPF3Q9H094 633 aa13.79□□□□□ -0.2
HERC1-214ENST00000561400 DHX36Q9H2U1 1008 aaKnown RBP13.79□□□□□ -0.2
HERC1-214ENST00000561400 CTNNA3Q9UI47 895 aa13.79□□□□□ -0.2
HERC1-214ENST00000561400 MYH8P13535 1937 aa13.79□□□□□ -0.2
HERC1-214ENST00000561400 PPARAQ07869 468 aa13.79□□□□□ -0.2
HERC1-214ENST00000561400 CDC37L1Q7L3B6 337 aa13.79□□□□□ -0.2
HERC1-214ENST00000561400 STK11IPQ8N1F8 1099 aa13.79□□□□□ -0.2
HERC1-214ENST00000561400 TACC3Q9Y6A5 838 aa13.79□□□□□ -0.2
HERC1-214ENST00000561400 ZNF213O14771 459 aa13.78□□□□□ -0.2
HERC1-214ENST00000561400 EPB41L2O43491 1005 aaKnown RBP13.78□□□□□ -0.2
HERC1-214ENST00000561400 CTDSPL2Q05D32 466 aa13.78□□□□□ -0.2
HERC1-214ENST00000561400 FMR1Q06787 632 aaKnown RBP eCLIP13.78□□□□□ -0.2
HERC1-214ENST00000561400 DNTTIP2Q5QJE6 756 aaKnown RBP13.78□□□□□ -0.2
HERC1-214ENST00000561400 CREB3L3Q68CJ9 461 aa13.78□□□□□ -0.2
HERC1-214ENST00000561400 TTC6Q86TZ1 520 aa13.78□□□□□ -0.2
HERC1-214ENST00000561400 DYNLL2Q96FJ2 89 aa13.78□□□□□ -0.2
HERC1-214ENST00000561400 INCENPQ9NQS7 918 aa13.78□□□□□ -0.2
HERC1-214ENST00000561400 PI4KBQ9UBF8 816 aa13.78□□□□□ -0.2
HERC1-214ENST00000561400 PPP2R3BQ9Y5P8 575 aa13.78□□□□□ -0.2
HERC1-214ENST00000561400 FAM196BA6NMK8 535 aa13.78□□□□□ -0.2
HERC1-214ENST00000561400 SLC27A2O14975 620 aa13.78□□□□□ -0.2
HERC1-214ENST00000561400 HSPA4P34932 840 aa13.78□□□□□ -0.2
HERC1-214ENST00000561400 IMMTQ16891 758 aaKnown RBP13.78□□□□□ -0.2
HERC1-214ENST00000561400 ANAPC4Q9UJX5 808 aa13.78□□□□□ -0.2
HERC1-214ENST00000561400 SSC5DA1L4H1 1573 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms