RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 MYH4Q9Y623 1939 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 IRF6O14896 467 aa8.45□□□□□ -1.06
SPG11-224ENST00000561268 INPP5BP32019 993 aa8.45□□□□□ -1.06
SPG11-224ENST00000561268 BTDP43251 543 aa8.45□□□□□ -1.06
SPG11-224ENST00000561268 RGS3P49796 1198 aa8.45□□□□□ -1.06
SPG11-224ENST00000561268 PPATQ06203 517 aa8.45□□□□□ -1.06
SPG11-224ENST00000561268 G3BP1Q13283 466 aaKnown RBP eCLIP8.45□□□□□ -1.06
SPG11-224ENST00000561268 OTOP1Q7RTM1 612 aa8.45□□□□□ -1.06
SPG11-224ENST00000561268 DZIP1Q86YF9 867 aaKnown RBP8.45□□□□□ -1.06
SPG11-224ENST00000561268 SLF2Q8IX21 1173 aa8.45□□□□□ -1.06
SPG11-224ENST00000561268 FAM43AQ8N2R8 423 aa8.45□□□□□ -1.06
SPG11-224ENST00000561268 DBNDD2Q9BQY9 259 aa8.45□□□□□ -1.06
SPG11-224ENST00000561268 C1orf115Q9H7X2 142 aa8.45□□□□□ -1.06
SPG11-224ENST00000561268 DAXXQ9UER7 740 aaPredicted RBP8.45□□□□□ -1.06
SPG11-224ENST00000561268 HPS5Q9UPZ3 1129 aa8.45□□□□□ -1.06
SPG11-224ENST00000561268 CCL15-CCL14A0A0B4J2E2 113 aa8.44□□□□□ -1.06
SPG11-224ENST00000561268 DDTLA6NHG4 134 aaPredicted RBP8.44□□□□□ -1.06
SPG11-224ENST00000561268 TBC1D12O60347 775 aa8.44□□□□□ -1.06
SPG11-224ENST00000561268 RRP1P56182 461 aaKnown RBP8.44□□□□□ -1.06
SPG11-224ENST00000561268 CCL15Q16663 113 aa8.44□□□□□ -1.06
SPG11-224ENST00000561268 TMED8Q6PL24 325 aaPredicted RBP8.44□□□□□ -1.06
SPG11-224ENST00000561268 ZFPM1Q8IX07 1006 aa8.44□□□□□ -1.06
SPG11-224ENST00000561268 PANK1Q8TE04 598 aa8.44□□□□□ -1.06
SPG11-224ENST00000561268 ZKSCAN4Q969J2 545 aaPredicted RBP8.44□□□□□ -1.06
SPG11-224ENST00000561268 EAF2Q96CJ1 260 aaPredicted RBP8.44□□□□□ -1.06
SPG11-224ENST00000561268 CCDC136Q96JN2 1154 aa8.44□□□□□ -1.06
SPG11-224ENST00000561268 ZBTB40Q9NUA8 1239 aa8.44□□□□□ -1.06
SPG11-224ENST00000561268 TLR7Q9NYK1 1049 aaKnown RBP8.44□□□□□ -1.06
SPG11-224ENST00000561268 ABCF2Q9UG63 623 aa8.44□□□□□ -1.06
SPG11-224ENST00000561268 LAMA4Q16363 1823 aa8.44□□□□□ -1.06
SPG11-224ENST00000561268 BTBD19C9JJ37 291 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 TLR2O60603 784 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 CYP2E1P05181 493 aaPredicted RBP8.43□□□□□ -1.06
SPG11-224ENST00000561268 CETPP11597 493 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 PPP4CP60510 307 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 GSTO1P78417 241 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 TCP10Q12799 353 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 MMRN1Q13201 1228 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 SNAPC2Q13487 334 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 AAMPQ13685 434 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 OTUD7BQ6GQQ9 843 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 ANKRD23Q86SG2 305 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 ADGRA1Q86SQ6 560 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 METTL16Q86W50 562 aaKnown RBP8.43□□□□□ -1.06
SPG11-224ENST00000561268 SIRT2Q8IXJ6 389 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 SCYL3Q8IZE3 742 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 ERO1AQ96HE7 468 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 OSBPL5Q9H0X9 879 aaPredicted RBP8.43□□□□□ -1.06
SPG11-224ENST00000561268 USP40Q9NVE5 1235 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 DDX19BQ9UMR2 479 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 MKI67P46013 3256 aaKnown RBP8.43□□□□□ -1.06
SPG11-224ENST00000561268 PLXNA1Q9UIW2 1896 aa8.43□□□□□ -1.06
SPG11-224ENST00000561268 ZNFX1Q9P2E3 1918 aaKnown RBP8.42□□□□□ -1.06
SPG11-224ENST00000561268 A0A0G2JLL6 359 aaPredicted RBP8.42□□□□□ -1.06
SPG11-224ENST00000561268 CCDC85CA6NKD9 419 aa8.42□□□□□ -1.06
SPG11-224ENST00000561268 CXCL11O14625 94 aa8.42□□□□□ -1.06
SPG11-224ENST00000561268 SURF6O75683 361 aaKnown RBP8.42□□□□□ -1.06
SPG11-224ENST00000561268 LDHCP07864 332 aa8.42□□□□□ -1.06
SPG11-224ENST00000561268 TAF1CQ15572 869 aaPredicted RBP8.42□□□□□ -1.06
SPG11-224ENST00000561268 PRRT2Q7Z6L0 340 aaPredicted RBP8.42□□□□□ -1.06
SPG11-224ENST00000561268 ERC1Q8IUD2 1116 aa8.42□□□□□ -1.06
SPG11-224ENST00000561268 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.42□□□□□ -1.06
SPG11-224ENST00000561268 ARMC5Q96C12 935 aa8.42□□□□□ -1.06
SPG11-224ENST00000561268 NEUROD6Q96NK8 337 aa8.42□□□□□ -1.06
SPG11-224ENST00000561268 DNAJC18Q9H819 358 aa8.42□□□□□ -1.06
SPG11-224ENST00000561268 RCAN3Q9UKA8 241 aa8.42□□□□□ -1.06
SPG11-224ENST00000561268 SLC45A1Q9Y2W3 748 aa8.42□□□□□ -1.06
SPG11-224ENST00000561268 FLT1P17948 1338 aa8.42□□□□□ -1.06
SPG11-224ENST00000561268 CTNND1O60716 968 aaKnown RBP8.41□□□□□ -1.06
SPG11-224ENST00000561268 PTPRAP18433 802 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 ANP32AP39687 249 aaKnown RBP8.41□□□□□ -1.06
SPG11-224ENST00000561268 ZAP70P43403 619 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 SP3Q02447 781 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 PDE3AQ14432 1141 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 CCDC158Q5M9N0 1113 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 TTC39AQ5SRH9 613 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 GPAT2Q6NUI2 795 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 C17orf99Q6UX52 265 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 TBC1D9Q6ZT07 1266 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 MIGA2Q7L4E1 593 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 CERS3Q8IU89 383 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 SPNS2Q8IVW8 549 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 RPAP2Q8IXW5 612 aaPredicted RBP8.41□□□□□ -1.06
SPG11-224ENST00000561268 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.41□□□□□ -1.06
SPG11-224ENST00000561268 CD99L2Q8TCZ2 262 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 FAM212AQ96EL1 285 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 TBC1D2Q9BYX2 928 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 ZFYVE28Q9HCC9 887 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 PIH1D3Q9NQM4 214 aaKnown RBP8.41□□□□□ -1.06
SPG11-224ENST00000561268 HERC5Q9UII4 1024 aaKnown RBP8.41□□□□□ -1.06
SPG11-224ENST00000561268 EXOC6BQ9Y2D4 811 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 PTPN22Q9Y2R2 807 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 AFG3L2Q9Y4W6 797 aa8.41□□□□□ -1.06
SPG11-224ENST00000561268 SLURP2P0DP57 97 aa8.4□□□□□ -1.06
SPG11-224ENST00000561268 BCRP11274 1271 aa8.4□□□□□ -1.06
SPG11-224ENST00000561268 NUBP1P53384 320 aa8.4□□□□□ -1.06
SPG11-224ENST00000561268 IRX5P78411 483 aaPredicted RBP8.4□□□□□ -1.06
SPG11-224ENST00000561268 LACTBP83111 547 aaPredicted RBP8.4□□□□□ -1.06
SPG11-224ENST00000561268 MLLT1Q03111 559 aaPredicted RBP8.4□□□□□ -1.06
SPG11-224ENST00000561268 HSP90AB4PQ58FF6 505 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms