RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 PRKAB2O43741 272 aa14.6□□□□□ -0.07
USP8-212ENST00000560730 MBD4O95243 580 aa14.6□□□□□ -0.07
USP8-212ENST00000560730 DOCK1Q14185 1865 aa14.6□□□□□ -0.07
USP8-212ENST00000560730 NOL9Q5SY16 702 aaKnown RBP14.6□□□□□ -0.07
USP8-212ENST00000560730 COL13A1Q5TAT6 717 aaPredicted RBP14.6□□□□□ -0.07
USP8-212ENST00000560730 ERO1BQ86YB8 467 aa14.6□□□□□ -0.07
USP8-212ENST00000560730 CERS3Q8IU89 383 aa14.6□□□□□ -0.07
USP8-212ENST00000560730 REM2Q8IYK8 340 aaPredicted RBP14.6□□□□□ -0.07
USP8-212ENST00000560730 PHIPQ8WWQ0 1821 aa14.6□□□□□ -0.07
USP8-212ENST00000560730 ATAD5Q96QE3 1844 aa14.6□□□□□ -0.07
USP8-212ENST00000560730 DHX36Q9H2U1 1008 aaKnown RBP14.6□□□□□ -0.07
USP8-212ENST00000560730 DNAJC18Q9H819 358 aa14.6□□□□□ -0.07
USP8-212ENST00000560730 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.6□□□□□ -0.07
USP8-212ENST00000560730 PI4KBQ9UBF8 816 aa14.6□□□□□ -0.07
USP8-212ENST00000560730 DDX60LQ5H9U9 1706 aaKnown RBP14.6□□□□□ -0.07
USP8-212ENST00000560730 MANSC4A6NHS7 340 aaPredicted RBP14.59□□□□□ -0.07
USP8-212ENST00000560730 IGF2BP3O00425 579 aaKnown RBP eCLIP14.59□□□□□ -0.07
USP8-212ENST00000560730 IRF6O14896 467 aa14.59□□□□□ -0.07
USP8-212ENST00000560730 RNF113AO15541 343 aaKnown RBP14.59□□□□□ -0.07
USP8-212ENST00000560730 EVX2Q03828 476 aa14.59□□□□□ -0.07
USP8-212ENST00000560730 SREBF2Q12772 1141 aa14.59□□□□□ -0.07
USP8-212ENST00000560730 ZSCAN25Q6NSZ9 544 aa14.59□□□□□ -0.07
USP8-212ENST00000560730 PLEKHM2Q8IWE5 1019 aa14.59□□□□□ -0.07
USP8-212ENST00000560730 SDR42E1Q8WUS8 393 aa14.59□□□□□ -0.07
USP8-212ENST00000560730 PTPN18Q99952 460 aa14.59□□□□□ -0.07
USP8-212ENST00000560730 CRNKL1Q9BZJ0 848 aaKnown RBP14.59□□□□□ -0.07
USP8-212ENST00000560730 CA12O43570 354 aa14.58□□□□□ -0.07
USP8-212ENST00000560730 CCDC84Q86UT8 332 aaPredicted RBP14.58□□□□□ -0.07
USP8-212ENST00000560730 METTL16Q86W50 562 aaKnown RBP14.58□□□□□ -0.07
USP8-212ENST00000560730 IFNL1Q8IU54 200 aa14.58□□□□□ -0.07
USP8-212ENST00000560730 SCYL3Q8IZE3 742 aa14.58□□□□□ -0.07
USP8-212ENST00000560730 BRI3BPQ8WY22 251 aa14.58□□□□□ -0.07
USP8-212ENST00000560730 OSBP2Q969R2 916 aa14.58□□□□□ -0.07
USP8-212ENST00000560730 R3HDMLQ9H3Y0 253 aa14.58□□□□□ -0.07
USP8-212ENST00000560730 TESPA1A2RU30 521 aaPredicted RBP14.58□□□□□ -0.08
USP8-212ENST00000560730 CTNND1O60716 968 aaKnown RBP14.58□□□□□ -0.08
USP8-212ENST00000560730 TBC1D8O95759 1140 aa14.58□□□□□ -0.08
USP8-212ENST00000560730 PTPRAP18433 802 aa14.58□□□□□ -0.08
USP8-212ENST00000560730 PLCD1P51178 756 aa14.58□□□□□ -0.08
USP8-212ENST00000560730 INHBEP58166 350 aa14.58□□□□□ -0.08
USP8-212ENST00000560730 JAG1P78504 1218 aa14.58□□□□□ -0.08
USP8-212ENST00000560730 PPATQ06203 517 aa14.58□□□□□ -0.08
USP8-212ENST00000560730 PPIL2Q13356 520 aa14.58□□□□□ -0.08
USP8-212ENST00000560730 SHROOM1Q2M3G4 852 aaPredicted RBP14.58□□□□□ -0.08
USP8-212ENST00000560730 FOXP4Q8IVH2 680 aaPredicted RBP14.58□□□□□ -0.08
USP8-212ENST00000560730 DCP1AQ9NPI6 582 aaPredicted RBP14.58□□□□□ -0.08
USP8-212ENST00000560730 SAGE1Q9NXZ1 904 aa14.58□□□□□ -0.08
USP8-212ENST00000560730 HERC5Q9UII4 1024 aaKnown RBP14.58□□□□□ -0.08
USP8-212ENST00000560730 PTPRFP10586 1907 aa14.57□□□□□ -0.08
USP8-212ENST00000560730 HLA-DOAP06340 250 aa14.57□□□□□ -0.08
USP8-212ENST00000560730 CYP2D6P10635 497 aa14.57□□□□□ -0.08
USP8-212ENST00000560730 PDE4AP27815 886 aa14.57□□□□□ -0.08
USP8-212ENST00000560730 CAP2P40123 477 aa14.57□□□□□ -0.08
USP8-212ENST00000560730 GTF2A2P52657 109 aa14.57□□□□□ -0.08
USP8-212ENST00000560730 APPBP2Q92624 585 aa14.57□□□□□ -0.08
USP8-212ENST00000560730 STRBPQ96SI9 672 aaKnown RBP14.57□□□□□ -0.08
USP8-212ENST00000560730 FSD1Q9BTV5 496 aa14.57□□□□□ -0.08
USP8-212ENST00000560730 PRDM10Q9NQV6 1147 aa14.57□□□□□ -0.08
USP8-212ENST00000560730 ZHX2Q9Y6X8 837 aa14.57□□□□□ -0.08
USP8-212ENST00000560730 CCL15-CCL14A0A0B4J2E2 113 aa14.56□□□□□ -0.08
USP8-212ENST00000560730 SMIM22K7EJ46 135 aa14.56□□□□□ -0.08
USP8-212ENST00000560730 M0R2C6 588 aa14.56□□□□□ -0.08
USP8-212ENST00000560730 ZFYP08048 801 aaPredicted RBP14.56□□□□□ -0.08
USP8-212ENST00000560730 CCL15Q16663 113 aa14.56□□□□□ -0.08
USP8-212ENST00000560730 CRACR2BQ8N4Y2 399 aaPredicted RBP14.56□□□□□ -0.08
USP8-212ENST00000560730 SEC62Q99442 399 aaKnown RBP14.56□□□□□ -0.08
USP8-212ENST00000560730 PICK1Q9NRD5 415 aa14.56□□□□□ -0.08
USP8-212ENST00000560730 MCM9Q9NXL9 1143 aa14.56□□□□□ -0.08
USP8-212ENST00000560730 KCNH4Q9UQ05 1017 aa14.56□□□□□ -0.08
USP8-212ENST00000560730 SLC4A4Q9Y6R1 1079 aa14.56□□□□□ -0.08
USP8-212ENST00000560730 POLR3DP05423 398 aaPredicted RBP14.55□□□□□ -0.08
USP8-212ENST00000560730 SNAPC2Q13487 334 aa14.55□□□□□ -0.08
USP8-212ENST00000560730 TTC6Q86TZ1 520 aa14.55□□□□□ -0.08
USP8-212ENST00000560730 EVI5LQ96CN4 794 aa14.55□□□□□ -0.08
USP8-212ENST00000560730 OSBPL3Q9H4L5 887 aa14.55□□□□□ -0.08
USP8-212ENST00000560730 AFG3L2Q9Y4W6 797 aa14.55□□□□□ -0.08
USP8-212ENST00000560730 CYP2D7A0A087X1C5 515 aa14.54□□□□□ -0.08
USP8-212ENST00000560730 GDF11O95390 407 aa14.54□□□□□ -0.08
USP8-212ENST00000560730 CETPP11597 493 aa14.54□□□□□ -0.08
USP8-212ENST00000560730 MOGSQ13724 837 aa14.54□□□□□ -0.08
USP8-212ENST00000560730 ZMYM1Q5SVZ6 1142 aa14.54□□□□□ -0.08
USP8-212ENST00000560730 FAM43AQ8N2R8 423 aa14.54□□□□□ -0.08
USP8-212ENST00000560730 TRIM34Q9BYJ4 488 aa14.54□□□□□ -0.08
USP8-212ENST00000560730 EHD4Q9H223 541 aa14.54□□□□□ -0.08
USP8-212ENST00000560730 ATP8A2Q9NTI2 1148 aa14.54□□□□□ -0.08
USP8-212ENST00000560730 SERPINB13Q9UIV8 391 aa14.54□□□□□ -0.08
USP8-212ENST00000560730 MYH8P13535 1937 aa14.53□□□□□ -0.08
USP8-212ENST00000560730 GSG1L2A8MUP6 293 aa14.53□□□□□ -0.08
USP8-212ENST00000560730 BTBD19C9JJ37 291 aa14.53□□□□□ -0.08
USP8-212ENST00000560730 USP17L12C9JPN9 530 aa14.53□□□□□ -0.08
USP8-212ENST00000560730 USP17L21D6R901 530 aa14.53□□□□□ -0.08
USP8-212ENST00000560730 GPAA1O43292 621 aa14.53□□□□□ -0.08
USP8-212ENST00000560730 GABPAQ06546 454 aa14.53□□□□□ -0.08
USP8-212ENST00000560730 DYNLL2Q96FJ2 89 aa14.53□□□□□ -0.08
USP8-212ENST00000560730 TRIM75PA6NK02 468 aa14.52□□□□□ -0.08
USP8-212ENST00000560730 TRIM6-TRIM34B2RNG4 842 aa14.52□□□□□ -0.08
USP8-212ENST00000560730 CXCL11O14625 94 aa14.52□□□□□ -0.08
USP8-212ENST00000560730 ALDH1A1P00352 501 aa14.52□□□□□ -0.08
USP8-212ENST00000560730 SHMT1P34896 483 aa14.52□□□□□ -0.08
USP8-212ENST00000560730 LRRFIP1Q32MZ4 808 aaKnown RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms