RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 SNAP23O00161 211 aa7.44□□□□□ -1.22
USP3-215ENST00000559771 WNT10BO00744 389 aa7.44□□□□□ -1.22
USP3-215ENST00000559771 VAMP4O75379 141 aa7.44□□□□□ -1.22
USP3-215ENST00000559771 TRPA1O75762 1119 aa7.44□□□□□ -1.22
USP3-215ENST00000559771 CELA2BP08218 269 aaPredicted RBP7.44□□□□□ -1.22
USP3-215ENST00000559771 HSP90B1P14625 803 aaKnown RBP7.44□□□□□ -1.22
USP3-215ENST00000559771 DGKZQ13574 1117 aa7.44□□□□□ -1.22
USP3-215ENST00000559771 CCDC102AQ96A19 550 aa7.44□□□□□ -1.22
USP3-215ENST00000559771 CDC5LQ99459 802 aaKnown RBP7.44□□□□□ -1.22
USP3-215ENST00000559771 IL16Q14005 1332 aa7.44□□□□□ -1.22
USP3-215ENST00000559771 FANCIQ9NVI1 1328 aa7.44□□□□□ -1.22
USP3-215ENST00000559771 UBE2Q2LH0YL09 131 aa7.43□□□□□ -1.22
USP3-215ENST00000559771 ITGA6P23229 1130 aa7.43□□□□□ -1.22
USP3-215ENST00000559771 FOXO4P98177 505 aa7.43□□□□□ -1.22
USP3-215ENST00000559771 MLLT1Q03111 559 aaPredicted RBP7.43□□□□□ -1.22
USP3-215ENST00000559771 FLIIQ13045 1269 aa7.43□□□□□ -1.22
USP3-215ENST00000559771 STRIP1Q5VSL9 837 aa7.43□□□□□ -1.22
USP3-215ENST00000559771 CERS5Q8N5B7 392 aa7.43□□□□□ -1.22
USP3-215ENST00000559771 SPRYD3Q8NCJ5 442 aa7.43□□□□□ -1.22
USP3-215ENST00000559771 ITPKCQ96DU7 683 aa7.43□□□□□ -1.22
USP3-215ENST00000559771 COA1Q9GZY4 146 aa7.43□□□□□ -1.22
USP3-215ENST00000559771 AOX1Q06278 1338 aa7.43□□□□□ -1.22
USP3-215ENST00000559771 ECM29Q5VYK3 1845 aa7.43□□□□□ -1.22
USP3-215ENST00000559771 SSC5DA1L4H1 1573 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 HTTP42858 3142 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 SASH1O94885 1247 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 FKBP1BP68106 108 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 NEXNQ0ZGT2 675 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 EPHA10Q5JZY3 1008 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 LCE1DQ5T752 114 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 LINS1Q8NG48 757 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 DNAAF4Q8WXU2 420 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 HLA-CQ95604 372 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 STK31Q9BXU1 1019 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 LEMD3Q9Y2U8 911 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 PCDHAC2Q9Y5I4 1007 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 ZNF804BA4D1E1 1349 aa7.42□□□□□ -1.22
USP3-215ENST00000559771 F6X3S4 739 aa7.41□□□□□ -1.22
USP3-215ENST00000559771 TAF5LO75529 589 aa7.41□□□□□ -1.22
USP3-215ENST00000559771 EXOSC9Q06265 439 aaKnown RBP7.41□□□□□ -1.22
USP3-215ENST00000559771 CHRNDQ07001 517 aa7.41□□□□□ -1.22
USP3-215ENST00000559771 BEND3Q5T5X7 828 aa7.41□□□□□ -1.22
USP3-215ENST00000559771 LDLRAD1Q5T700 205 aa7.41□□□□□ -1.22
USP3-215ENST00000559771 C15orf52Q6ZUT6 534 aaKnown RBP7.41□□□□□ -1.22
USP3-215ENST00000559771 VWA5B2Q8N398 1253 aa7.41□□□□□ -1.22
USP3-215ENST00000559771 CHMP4AQ9BY43 222 aa7.41□□□□□ -1.22
USP3-215ENST00000559771 R3HDMLQ9H3Y0 253 aa7.41□□□□□ -1.22
USP3-215ENST00000559771 CD209Q9NNX6 404 aa7.41□□□□□ -1.22
USP3-215ENST00000559771 FZD1Q9UP38 647 aa7.41□□□□□ -1.22
USP3-215ENST00000559771 ZIC2O95409 532 aaPredicted RBP7.4□□□□□ -1.22
USP3-215ENST00000559771 TBC1D8O95759 1140 aa7.4□□□□□ -1.22
USP3-215ENST00000559771 JUNDP17535 347 aa7.4□□□□□ -1.22
USP3-215ENST00000559771 IGHMBP2P38935 993 aaKnown RBP7.4□□□□□ -1.22
USP3-215ENST00000559771 TM4SF4P48230 202 aa7.4□□□□□ -1.22
USP3-215ENST00000559771 GTF2IP78347 998 aa7.4□□□□□ -1.22
USP3-215ENST00000559771 PTPN12Q05209 780 aaKnown RBP7.4□□□□□ -1.22
USP3-215ENST00000559771 FKBP5Q13451 457 aaPredicted RBP7.4□□□□□ -1.22
USP3-215ENST00000559771 TTLL5Q6EMB2 1281 aa7.4□□□□□ -1.22
USP3-215ENST00000559771 KIAA0825Q8IV33 1275 aa7.4□□□□□ -1.22
USP3-215ENST00000559771 CCDC155Q8N6L0 562 aa7.4□□□□□ -1.22
USP3-215ENST00000559771 HELBQ8NG08 1087 aaPredicted RBP7.4□□□□□ -1.22
USP3-215ENST00000559771 KAZALD1Q96I82 304 aa7.4□□□□□ -1.22
USP3-215ENST00000559771 ZNF594Q96JF6 807 aaPredicted RBP7.4□□□□□ -1.22
USP3-215ENST00000559771 ANKRD2Q9GZV1 360 aa7.4□□□□□ -1.22
USP3-215ENST00000559771 MYO3BQ8WXR4 1341 aa7.4□□□□□ -1.22
USP3-215ENST00000559771 OTOFQ9HC10 1997 aa7.39□□□□□ -1.23
USP3-215ENST00000559771 ARAP2Q8WZ64 1704 aa7.39□□□□□ -1.23
USP3-215ENST00000559771 KRBA1A5PL33 1030 aa7.39□□□□□ -1.23
USP3-215ENST00000559771 BMP2P12643 396 aa7.39□□□□□ -1.23
USP3-215ENST00000559771 IL1R1P14778 569 aa7.39□□□□□ -1.23
USP3-215ENST00000559771 MMP14P50281 582 aa7.39□□□□□ -1.23
USP3-215ENST00000559771 SOX10P56693 466 aa7.39□□□□□ -1.23
USP3-215ENST00000559771 CTU1Q7Z7A3 348 aaKnown RBP7.39□□□□□ -1.23
USP3-215ENST00000559771 WDR63Q8IWG1 891 aa7.39□□□□□ -1.23
USP3-215ENST00000559771 LINC00528Q8N1L1 170 aa7.39□□□□□ -1.23
USP3-215ENST00000559771 MTMR14Q8NCE2 650 aa7.39□□□□□ -1.23
USP3-215ENST00000559771 ZNF296Q8WUU4 475 aaPredicted RBP7.39□□□□□ -1.23
USP3-215ENST00000559771 PHOX2BQ99453 314 aa7.39□□□□□ -1.23
USP3-215ENST00000559771 MPHOSPH8Q99549 860 aa7.39□□□□□ -1.23
USP3-215ENST00000559771 MYH16Q9H6N6 1097 aa7.39□□□□□ -1.23
USP3-215ENST00000559771 COL1A1P02452 1464 aaPredicted RBP7.38□□□□□ -1.23
USP3-215ENST00000559771 CENPFP49454 3210 aa7.38□□□□□ -1.23
USP3-215ENST00000559771 ANKRD18BA2A2Z9 1011 aa7.38□□□□□ -1.23
USP3-215ENST00000559771 PHF20L1A8MW92 1017 aa7.38□□□□□ -1.23
USP3-215ENST00000559771 PRKG1Q13976 671 aa7.38□□□□□ -1.23
USP3-215ENST00000559771 MAP3K11Q16584 847 aa7.38□□□□□ -1.23
USP3-215ENST00000559771 NOM1Q5C9Z4 860 aaKnown RBP7.38□□□□□ -1.23
USP3-215ENST00000559771 LMBR1LQ6UX01 489 aa7.38□□□□□ -1.23
USP3-215ENST00000559771 OGFOD1Q8N543 542 aa7.38□□□□□ -1.23
USP3-215ENST00000559771 CLMNQ96JQ2 1002 aa7.38□□□□□ -1.23
USP3-215ENST00000559771 PRMT6Q96LA8 375 aaPredicted RBP7.38□□□□□ -1.23
USP3-215ENST00000559771 CFHR5Q9BXR6 569 aa7.38□□□□□ -1.23
USP3-215ENST00000559771 DEFB129Q9H1M3 183 aa7.38□□□□□ -1.23
USP3-215ENST00000559771 MRS2Q9HD23 443 aa7.38□□□□□ -1.23
USP3-215ENST00000559771 TSHZ2Q9NRE2 1034 aa7.38□□□□□ -1.23
USP3-215ENST00000559771 JAG2Q9Y219 1238 aa7.38□□□□□ -1.23
USP3-215ENST00000559771 BRCA2P51587 3418 aa7.37□□□□□ -1.23
USP3-215ENST00000559771 ZNF521Q96K83 1311 aa7.37□□□□□ -1.23
USP3-215ENST00000559771 SLC35F4A4IF30 521 aa7.37□□□□□ -1.23
USP3-215ENST00000559771 GPR25O00155 361 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms