RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 TDRD7Q8NHU6 1098 aaKnown RBP4.88□□□□□ -1.63
ZEB1-212ENST00000558655 XAGE2Q96GT9 111 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 CCDC85AQ96PX6 553 aaPredicted RBP4.88□□□□□ -1.63
ZEB1-212ENST00000558655 HAUS7Q99871 368 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 SIL1Q9H173 461 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 MAGEC2Q9UBF1 373 aaPredicted RBP4.88□□□□□ -1.63
ZEB1-212ENST00000558655 IFIT2P09913 472 aaKnown RBP4.88□□□□□ -1.63
ZEB1-212ENST00000558655 RFX1P22670 979 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 MMP14P50281 582 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 KIAA2012Q0VF49 1180 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 NFKBIBQ15653 356 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 TTC22Q5TAA0 569 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 C11orf96Q7Z7L8 435 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 FAM84BQ96KN1 310 aaPredicted RBP4.88□□□□□ -1.63
ZEB1-212ENST00000558655 SPACA7Q96KW9 195 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 DBNDD2Q9BQY9 259 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 LNPKQ9C0E8 428 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 COA1Q9GZY4 146 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 SNRKQ9NRH2 765 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 POLLQ9UGP5 575 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 METRNQ9UJH8 293 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 NAV1Q8NEY1 1877 aa4.88□□□□□ -1.63
ZEB1-212ENST00000558655 H0YGN5 161 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 ERC2O15083 957 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 BDNFP23560 247 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 ADORA1P30542 326 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 DPP8Q6V1X1 898 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-212ENST00000558655 GET4Q7L5D6 327 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-212ENST00000558655 GIPC2Q8TF65 315 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 GNL3LQ9NVN8 582 aaKnown RBP4.87□□□□□ -1.63
ZEB1-212ENST00000558655 ABT1Q9ULW3 272 aaKnown RBP4.87□□□□□ -1.63
ZEB1-212ENST00000558655 TNRC18O15417 2968 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-212ENST00000558655 POTEMA6NI47 508 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 NFKBIEO00221 500 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 TBC1D12O60347 775 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 UFL1O94874 794 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 CCDC102BQ68D86 513 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 ZNF804AQ7Z570 1209 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 PDCD7Q8N8D1 485 aaKnown RBP4.87□□□□□ -1.63
ZEB1-212ENST00000558655 OTUD7AQ8TE49 926 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-212ENST00000558655 TMX4Q9H1E5 349 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-212ENST00000558655 GOPCQ9HD26 462 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 IL1RAPL2Q9NP60 686 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 TLR7Q9NYK1 1049 aaKnown RBP4.87□□□□□ -1.63
ZEB1-212ENST00000558655 DENND2AQ9ULE3 1009 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 BCS1LQ9Y276 419 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 hCG_2014768A0A024R1R8 64 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 TTC36A6NLP5 189 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 TAF5LO75529 589 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 HIBADHP31937 336 aaKnown RBP4.87□□□□□ -1.63
ZEB1-212ENST00000558655 TIMM10P62072 90 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 IRX5P78411 483 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-212ENST00000558655 TMEM31Q5JXX7 168 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 CCDC158Q5M9N0 1113 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 EGFLAMQ63HQ2 1017 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 PODNQ7Z5L7 613 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 MRIQ9BWK5 157 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 TBC1D2Q9BYX2 928 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 TAF1DQ9H5J8 278 aaPredicted RBP4.87□□□□□ -1.63
ZEB1-212ENST00000558655 USTQ9Y2C2 406 aa4.87□□□□□ -1.63
ZEB1-212ENST00000558655 GSPT1P15170 499 aaKnown RBP4.86□□□□□ -1.63
ZEB1-212ENST00000558655 IARSP41252 1262 aaKnown RBP4.86□□□□□ -1.63
ZEB1-212ENST00000558655 PHKA1P46020 1223 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 GYS2P54840 703 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 CAVIN4Q5BKX8 364 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 NBPF11Q86T75 865 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 HELBQ8NG08 1087 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-212ENST00000558655 NKX2-3Q8TAU0 364 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 CALR3Q96L12 384 aaKnown RBP4.86□□□□□ -1.63
ZEB1-212ENST00000558655 CCDC8Q9H0W5 538 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-212ENST00000558655 CD209Q9NNX6 404 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 ANKIB1Q9P2G1 1089 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 MYH1P12882 1939 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 POM121CA8CG34 1229 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 C21orf2O43822 256 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 DHX16O60231 1041 aaKnown RBP4.86□□□□□ -1.63
ZEB1-212ENST00000558655 ZNF500O60304 480 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-212ENST00000558655 WDHD1O75717 1129 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-212ENST00000558655 KLRK1P26718 216 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 MLLT3P42568 568 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-212ENST00000558655 MCAMP43121 646 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 KCNJ4P48050 445 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 RASGRF1Q13972 1273 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 TTF1Q15361 905 aaPredicted RBP4.86□□□□□ -1.63
ZEB1-212ENST00000558655 PTPROQ16827 1216 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 C4orf46Q504U0 113 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 ZNF280DQ6N043 979 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 CREBRFQ8IUR6 639 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 SPATA5Q8NB90 893 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 TBC1D22AQ8WUA7 517 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 PBXIP1Q96AQ6 731 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 TAOK3Q9H2K8 898 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 HMG20BQ9P0W2 317 aa4.86□□□□□ -1.63
ZEB1-212ENST00000558655 NSFL1CQ9UNZ2 370 aaKnown RBP4.86□□□□□ -1.63
ZEB1-212ENST00000558655 SIPA1L1O43166 1804 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 FZD9O00144 591 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 HIP1O00291 1037 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 HDLBPQ00341 1268 aaKnown RBP4.85□□□□□ -1.63
ZEB1-212ENST00000558655 SCARF1Q14162 830 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 SF3A1Q15459 793 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms