RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 IFNL3Q8IZI9 196 aa20.87■□□□□ 0.93
TPM1-214ENST00000558544 RUFY2Q8WXA3 655 aa20.87■□□□□ 0.93
TPM1-214ENST00000558544 ZNF341Q9BYN7 854 aa20.87■□□□□ 0.93
TPM1-214ENST00000558544 USP17L12C9JPN9 530 aa20.86■□□□□ 0.93
TPM1-214ENST00000558544 USP17L21D6R901 530 aa20.86■□□□□ 0.93
TPM1-214ENST00000558544 CDC45O75419 566 aa20.86■□□□□ 0.93
TPM1-214ENST00000558544 MAP3K11Q16584 847 aa20.86■□□□□ 0.93
TPM1-214ENST00000558544 TTC6Q86TZ1 520 aa20.86■□□□□ 0.93
TPM1-214ENST00000558544 AMOTL1Q8IY63 956 aa20.86■□□□□ 0.93
TPM1-214ENST00000558544 CRACR2BQ8N4Y2 399 aaPredicted RBP20.86■□□□□ 0.93
TPM1-214ENST00000558544 NACAP1Q9BZK3 213 aa20.86■□□□□ 0.93
TPM1-214ENST00000558544 ARPP21Q9UBL0 812 aaPredicted RBP20.86■□□□□ 0.93
TPM1-214ENST00000558544 HSPD1P10809 573 aaKnown RBP20.85■□□□□ 0.93
TPM1-214ENST00000558544 CTR9Q6PD62 1173 aa20.85■□□□□ 0.93
TPM1-214ENST00000558544 KLRG1Q96E93 195 aa20.85■□□□□ 0.93
TPM1-214ENST00000558544 WRNIP1Q96S55 665 aa20.85■□□□□ 0.93
TPM1-214ENST00000558544 TRIM34Q9BYJ4 488 aa20.85■□□□□ 0.93
TPM1-214ENST00000558544 NAPBQ9H115 298 aa20.85■□□□□ 0.93
TPM1-214ENST00000558544 DNAJC18Q9H819 358 aa20.85■□□□□ 0.93
TPM1-214ENST00000558544 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.85■□□□□ 0.93
TPM1-214ENST00000558544 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.85■□□□□ 0.93
TPM1-214ENST00000558544 HERC5Q9UII4 1024 aaKnown RBP20.85■□□□□ 0.93
TPM1-214ENST00000558544 SMIM22K7EJ46 135 aa20.85■□□□□ 0.93
TPM1-214ENST00000558544 SGSM2O43147 1006 aa20.85■□□□□ 0.93
TPM1-214ENST00000558544 TBC1D12O60347 775 aa20.85■□□□□ 0.93
TPM1-214ENST00000558544 MAP3K10Q02779 954 aa20.85■□□□□ 0.93
TPM1-214ENST00000558544 C12orf60Q5U649 245 aa20.85■□□□□ 0.93
TPM1-214ENST00000558544 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.85■□□□□ 0.93
TPM1-214ENST00000558544 EHD4Q9H223 541 aa20.85■□□□□ 0.93
TPM1-214ENST00000558544 SERPINB13Q9UIV8 391 aa20.85■□□□□ 0.93
TPM1-214ENST00000558544 MINDY4BA8MYZ0 360 aa20.84■□□□□ 0.93
TPM1-214ENST00000558544 FOXP4Q8IVH2 680 aaPredicted RBP20.84■□□□□ 0.93
TPM1-214ENST00000558544 PHIPQ8WWQ0 1821 aa20.83■□□□□ 0.93
TPM1-214ENST00000558544 INPP5BP32019 993 aa20.83■□□□□ 0.92
TPM1-214ENST00000558544 SBK1Q52WX2 424 aa20.83■□□□□ 0.92
TPM1-214ENST00000558544 LDLRAD1Q5T700 205 aa20.83■□□□□ 0.92
TPM1-214ENST00000558544 CASC1Q6TDU7 716 aa20.83■□□□□ 0.92
TPM1-214ENST00000558544 PAXIP1Q6ZW49 1069 aaPredicted RBP20.83■□□□□ 0.92
TPM1-214ENST00000558544 METTL16Q86W50 562 aaKnown RBP20.83■□□□□ 0.92
TPM1-214ENST00000558544 ANKRD13AQ8IZ07 590 aa20.83■□□□□ 0.92
TPM1-214ENST00000558544 DYNLL2Q96FJ2 89 aa20.83■□□□□ 0.92
TPM1-214ENST00000558544 CLMNQ96JQ2 1002 aa20.83■□□□□ 0.92
TPM1-214ENST00000558544 ESYT1Q9BSJ8 1104 aa20.83■□□□□ 0.92
TPM1-214ENST00000558544 ZNF112Q9UJU3 913 aa20.83■□□□□ 0.92
TPM1-214ENST00000558544 RASSF10A6NK89 507 aa20.82■□□□□ 0.92
TPM1-214ENST00000558544 PHF20L1A8MW92 1017 aa20.82■□□□□ 0.92
TPM1-214ENST00000558544 MAP3K9P80192 1104 aa20.82■□□□□ 0.92
TPM1-214ENST00000558544 VGLL4Q14135 290 aa20.82■□□□□ 0.92
TPM1-214ENST00000558544 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.82■□□□□ 0.92
TPM1-214ENST00000558544 ZKSCAN4Q969J2 545 aaPredicted RBP20.82■□□□□ 0.92
TPM1-214ENST00000558544 ZMYM6O95789 1325 aa20.81■□□□□ 0.92
TPM1-214ENST00000558544 FGAP02671 866 aa20.81■□□□□ 0.92
TPM1-214ENST00000558544 GABPAQ06546 454 aa20.81■□□□□ 0.92
TPM1-214ENST00000558544 ALX1Q15699 326 aa20.81■□□□□ 0.92
TPM1-214ENST00000558544 CEP350Q5VT06 3117 aa20.81■□□□□ 0.92
TPM1-214ENST00000558544 STK11IPQ8N1F8 1099 aa20.81■□□□□ 0.92
TPM1-214ENST00000558544 SLC44A5Q8NCS7 719 aa20.81■□□□□ 0.92
TPM1-214ENST00000558544 ROBO3Q96MS0 1386 aa20.81■□□□□ 0.92
TPM1-214ENST00000558544 DSCC1Q9BVC3 393 aa20.81■□□□□ 0.92
TPM1-214ENST00000558544 CSADQ9Y600 493 aa20.81■□□□□ 0.92
TPM1-214ENST00000558544 ZNF157P51786 506 aaPredicted RBP20.8■□□□□ 0.92
TPM1-214ENST00000558544 PPARAQ07869 468 aa20.8■□□□□ 0.92
TPM1-214ENST00000558544 RRP1BQ14684 758 aaKnown RBP20.8■□□□□ 0.92
TPM1-214ENST00000558544 DEFB115Q30KQ5 88 aa20.8■□□□□ 0.92
TPM1-214ENST00000558544 RGMBQ6NW40 437 aa20.8■□□□□ 0.92
TPM1-214ENST00000558544 HHIPL1Q96JK4 782 aa20.8■□□□□ 0.92
TPM1-214ENST00000558544 ELP3Q9H9T3 547 aa20.8■□□□□ 0.92
TPM1-214ENST00000558544 SHMT1P34896 483 aa20.79■□□□□ 0.92
TPM1-214ENST00000558544 GRM1Q13255 1194 aa20.79■□□□□ 0.92
TPM1-214ENST00000558544 CYP4F22Q6NT55 531 aa20.79■□□□□ 0.92
TPM1-214ENST00000558544 C16orf86Q6ZW13 317 aa20.79■□□□□ 0.92
TPM1-214ENST00000558544 SNCAIPQ9Y6H5 919 aa20.79■□□□□ 0.92
TPM1-214ENST00000558544 PTPRFP10586 1907 aa20.78■□□□□ 0.92
TPM1-214ENST00000558544 UNCXA6NJT0 531 aa20.78■□□□□ 0.92
TPM1-214ENST00000558544 GDF11O95390 407 aa20.78■□□□□ 0.92
TPM1-214ENST00000558544 PTH1RQ03431 593 aa20.78■□□□□ 0.92
TPM1-214ENST00000558544 NOL9Q5SY16 702 aaKnown RBP20.78■□□□□ 0.92
TPM1-214ENST00000558544 TATDN1Q6P1N9 297 aa20.78■□□□□ 0.92
TPM1-214ENST00000558544 RASAL3Q86YV0 1011 aa20.78■□□□□ 0.92
TPM1-214ENST00000558544 SWAP70Q9UH65 585 aa20.78■□□□□ 0.92
TPM1-214ENST00000558544 THSD7BQ9C0I4 1608 aa20.77■□□□□ 0.92
TPM1-214ENST00000558544 GREB1LQ9C091 1923 aaPredicted RBP20.77■□□□□ 0.92
TPM1-214ENST00000558544 CTNND1O60716 968 aaKnown RBP20.77■□□□□ 0.92
TPM1-214ENST00000558544 CDK8P49336 464 aa20.77■□□□□ 0.92
TPM1-214ENST00000558544 HAND2P61296 217 aa20.77■□□□□ 0.92
TPM1-214ENST00000558544 CTDSPL2Q05D32 466 aa20.77■□□□□ 0.92
TPM1-214ENST00000558544 SHROOM1Q2M3G4 852 aaPredicted RBP20.77■□□□□ 0.92
TPM1-214ENST00000558544 SCYL3Q8IZE3 742 aa20.77■□□□□ 0.92
TPM1-214ENST00000558544 SLC10A4Q96EP9 437 aa20.77■□□□□ 0.92
TPM1-214ENST00000558544 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.77■□□□□ 0.92
TPM1-214ENST00000558544 CAP2P40123 477 aa20.76■□□□□ 0.91
TPM1-214ENST00000558544 KIAA1211Q6ZU35 1233 aa20.76■□□□□ 0.91
TPM1-214ENST00000558544 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
TPM1-214ENST00000558544 CAPNS2Q96L46 248 aa20.76■□□□□ 0.91
TPM1-214ENST00000558544 ANO2Q9NQ90 1003 aa20.76■□□□□ 0.91
TPM1-214ENST00000558544 SLC10A3P09131 477 aa20.75■□□□□ 0.91
TPM1-214ENST00000558544 MKRN3Q13064 507 aaKnown RBP20.75■□□□□ 0.91
TPM1-214ENST00000558544 CERKLQ49MI3 558 aaPredicted RBP20.75■□□□□ 0.91
TPM1-214ENST00000558544 OPTNQ96CV9 577 aa20.75■□□□□ 0.91
TPM1-214ENST00000558544 WNK4Q96J92 1243 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms