RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 FMR1NBQ8N0W7 255 aaPredicted RBP12.24□□□□□ -0.45
TPM1-210ENST00000558264 ENAHQ8N8S7 591 aaPredicted RBP12.24□□□□□ -0.45
TPM1-210ENST00000558264 CLIC6Q96NY7 704 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 FMNL1O95466 1100 aaPredicted RBP12.24□□□□□ -0.45
TPM1-210ENST00000558264 NR5A1Q13285 461 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 SPECC1Q5M775 1068 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 FANCBQ8NB91 859 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 KCNG4Q8TDN1 519 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 MYH13Q9UKX3 1938 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 IFNAR1P17181 557 aa12.24□□□□□ -0.45
TPM1-210ENST00000558264 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.24□□□□□ -0.45
TPM1-210ENST00000558264 DCP1AQ9NPI6 582 aaPredicted RBP12.24□□□□□ -0.45
TPM1-210ENST00000558264 ECM29Q5VYK3 1845 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 COL24A1Q17RW2 1714 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 PLEKHA8P1O95397 391 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 YEATS4O95619 227 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 USP17L8P0C7I0 530 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 GRAPQ13588 217 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 SEC23AQ15436 765 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 NBPF11Q86T75 865 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 GRAPLQ8TC17 118 aaPredicted RBP12.23□□□□□ -0.45
TPM1-210ENST00000558264 OXER1Q8TDS5 423 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 ZSCAN10Q96SZ4 725 aaPredicted RBP12.23□□□□□ -0.45
TPM1-210ENST00000558264 QTRT2Q9H974 415 aaKnown RBP12.23□□□□□ -0.45
TPM1-210ENST00000558264 TAF1LQ8IZX4 1826 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 GYS1P13807 737 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 PFKFB1P16118 471 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 AXDND1Q5T1B0 1012 aaPredicted RBP12.23□□□□□ -0.45
TPM1-210ENST00000558264 IFIT1BQ5T764 474 aaKnown RBP12.23□□□□□ -0.45
TPM1-210ENST00000558264 DIS3L2Q8IYB7 885 aaKnown RBP12.23□□□□□ -0.45
TPM1-210ENST00000558264 TRIM22Q8IYM9 498 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 CRACR2BQ8N4Y2 399 aaPredicted RBP12.23□□□□□ -0.45
TPM1-210ENST00000558264 RPGRQ92834 1020 aaKnown RBP12.23□□□□□ -0.45
TPM1-210ENST00000558264 TRIM5Q9C035 493 aa12.23□□□□□ -0.45
TPM1-210ENST00000558264 TRPC5Q9UL62 973 aaPredicted RBP12.23□□□□□ -0.45
TPM1-210ENST00000558264 MYH2Q9UKX2 1941 aa12.22□□□□□ -0.45
TPM1-210ENST00000558264 GPSM2P81274 684 aa12.22□□□□□ -0.45
TPM1-210ENST00000558264 DRC7Q8IY82 874 aa12.22□□□□□ -0.45
TPM1-210ENST00000558264 SHISA4Q96DD7 197 aa12.22□□□□□ -0.45
TPM1-210ENST00000558264 BRIP1Q9BX63 1249 aa12.22□□□□□ -0.45
TPM1-210ENST00000558264 CRNKL1Q9BZJ0 848 aaKnown RBP12.22□□□□□ -0.45
TPM1-210ENST00000558264 BCL11BQ9C0K0 894 aaPredicted RBP12.22□□□□□ -0.45
TPM1-210ENST00000558264 MCM9Q9NXL9 1143 aa12.22□□□□□ -0.45
TPM1-210ENST00000558264 VPS54Q9P1Q0 977 aa12.22□□□□□ -0.45
TPM1-210ENST00000558264 NRBP1Q9UHY1 535 aa12.22□□□□□ -0.45
TPM1-210ENST00000558264 ANAPC4Q9UJX5 808 aa12.22□□□□□ -0.45
TPM1-210ENST00000558264 MTMR7Q9Y216 660 aa12.22□□□□□ -0.45
TPM1-210ENST00000558264 FAM205CA6NFA0 338 aa12.22□□□□□ -0.45
TPM1-210ENST00000558264 SLC39A14Q15043 492 aa12.22□□□□□ -0.45
TPM1-210ENST00000558264 STX1AQ16623 288 aa12.22□□□□□ -0.45
TPM1-210ENST00000558264 SEMA3EO15041 775 aa12.21□□□□□ -0.45
TPM1-210ENST00000558264 ZNF500O60304 480 aaPredicted RBP12.21□□□□□ -0.45
TPM1-210ENST00000558264 ZNF202O95125 648 aa12.21□□□□□ -0.45
TPM1-210ENST00000558264 MMP1P03956 469 aa12.21□□□□□ -0.45
TPM1-210ENST00000558264 SERPINB2P05120 415 aa12.21□□□□□ -0.45
TPM1-210ENST00000558264 GRIN1Q05586 938 aa12.21□□□□□ -0.45
TPM1-210ENST00000558264 SHC4Q6S5L8 630 aa12.21□□□□□ -0.45
TPM1-210ENST00000558264 SH3RF3Q8TEJ3 882 aaPredicted RBP12.21□□□□□ -0.45
TPM1-210ENST00000558264 DYNLL2Q96FJ2 89 aa12.21□□□□□ -0.45
TPM1-210ENST00000558264 MAP3K14Q99558 947 aa12.21□□□□□ -0.45
TPM1-210ENST00000558264 IRS2Q9Y4H2 1338 aa12.21□□□□□ -0.45
TPM1-210ENST00000558264 DUOX1Q9NRD9 1551 aa12.21□□□□□ -0.46
TPM1-210ENST00000558264 A0A1W2PQ27 194 aa12.21□□□□□ -0.46
TPM1-210ENST00000558264 A0A1W2PQ64 194 aa12.21□□□□□ -0.46
TPM1-210ENST00000558264 A0A1W2PQD8 194 aa12.21□□□□□ -0.46
TPM1-210ENST00000558264 UFL1O94874 794 aa12.21□□□□□ -0.46
TPM1-210ENST00000558264 PTGS1P23219 599 aa12.21□□□□□ -0.46
TPM1-210ENST00000558264 U2AF2P26368 475 aaKnown RBP eCLIP12.21□□□□□ -0.464e-8■■■■■ 35.5
TPM1-210ENST00000558264 PTPAQ15257 358 aa12.21□□□□□ -0.46
TPM1-210ENST00000558264 IQCA1Q86XH1 822 aa12.21□□□□□ -0.46
TPM1-210ENST00000558264 NOSTRINQ8IVI9 506 aa12.21□□□□□ -0.46
TPM1-210ENST00000558264 CERKQ8TCT0 537 aa12.21□□□□□ -0.46
TPM1-210ENST00000558264 KCNF1Q9H3M0 494 aa12.21□□□□□ -0.46
TPM1-210ENST00000558264 R3HCC1Q9Y3T6 440 aaKnown RBP12.21□□□□□ -0.46
TPM1-210ENST00000558264 SBF2Q86WG5 1849 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 LY75O60449 1722 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 CTAGE5O15320 804 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 LDHBP07195 334 aaKnown RBP12.2□□□□□ -0.46
TPM1-210ENST00000558264 IQCB1Q15051 598 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 DPCR1Q3MIW9 517 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 AOPEPQ8N6M6 819 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 SAP30BPQ9UHR5 308 aaKnown RBP12.2□□□□□ -0.46
TPM1-210ENST00000558264 V9GY48 417 aaPredicted RBP12.2□□□□□ -0.46
TPM1-210ENST00000558264 STK36Q9NRP7 1315 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 GOLGA6L19H0YKK7 550 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 ZBTB22O15209 634 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 RGL2O15211 777 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 DEXIO95424 95 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 USP5P45974 858 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 TOB1P50616 345 aaPredicted RBP12.2□□□□□ -0.46
TPM1-210ENST00000558264 KIAA2012Q0VF49 1180 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 CATIPQ7Z7H3 387 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 TMTC2Q8N394 836 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 SLC44A5Q8NCS7 719 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 TDRD7Q8NHU6 1098 aaKnown RBP12.2□□□□□ -0.46
TPM1-210ENST00000558264 PYCARDQ9ULZ3 195 aa12.2□□□□□ -0.46
TPM1-210ENST00000558264 BAZ2BQ9UIF8 2168 aaKnown RBP12.2□□□□□ -0.46
TPM1-210ENST00000558264 TSPY2A6NKD2 308 aa12.19□□□□□ -0.46
TPM1-210ENST00000558264 BECN2A8MW95 431 aa12.19□□□□□ -0.46
TPM1-210ENST00000558264 OFD1O75665 1012 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms