RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 RRP1BQ14684 758 aaKnown RBP13.7□□□□□ -0.22
RORA-207ENST00000558234 CACNB3P54284 484 aa13.69□□□□□ -0.22
RORA-207ENST00000558234 STOX1Q6ZVD7 989 aa13.69□□□□□ -0.22
RORA-207ENST00000558234 TEX11Q8IYF3 940 aa13.69□□□□□ -0.22
RORA-207ENST00000558234 IGKV6D-41A0A0C4DH26 115 aa13.69□□□□□ -0.22
RORA-207ENST00000558234 CYP21A2P08686 494 aa13.69□□□□□ -0.22
RORA-207ENST00000558234 PLCD1P51178 756 aa13.69□□□□□ -0.22
RORA-207ENST00000558234 C16orf86Q6ZW13 317 aa13.69□□□□□ -0.22
RORA-207ENST00000558234 TMEM39BQ9GZU3 492 aa13.69□□□□□ -0.22
RORA-207ENST00000558234 DEFB129Q9H1M3 183 aa13.69□□□□□ -0.22
RORA-207ENST00000558234 ADM5C9JUS6 153 aa13.68□□□□□ -0.22
RORA-207ENST00000558234 FGAP02671 866 aa13.68□□□□□ -0.22
RORA-207ENST00000558234 TGFBRAP1Q8WUH2 860 aa13.68□□□□□ -0.22
RORA-207ENST00000558234 CRNKL1Q9BZJ0 848 aaKnown RBP13.68□□□□□ -0.22
RORA-207ENST00000558234 CLRN2A0PK11 232 aa13.68□□□□□ -0.22
RORA-207ENST00000558234 CHADLQ6NUI6 762 aa13.68□□□□□ -0.22
RORA-207ENST00000558234 AIDAQ96BJ3 306 aa13.68□□□□□ -0.22
RORA-207ENST00000558234 ARPP21Q9UBL0 812 aaPredicted RBP13.68□□□□□ -0.22
RORA-207ENST00000558234 CST9Q5W186 159 aa13.68□□□□□ -0.22
RORA-207ENST00000558234 DLK2Q6UY11 383 aa13.68□□□□□ -0.22
RORA-207ENST00000558234 CLEC17AQ6ZS10 378 aa13.68□□□□□ -0.22
RORA-207ENST00000558234 YY1P25490 414 aa13.67□□□□□ -0.22
RORA-207ENST00000558234 SHMT1P34896 483 aa13.67□□□□□ -0.22
RORA-207ENST00000558234 RASA3Q14644 834 aa13.67□□□□□ -0.22
RORA-207ENST00000558234 NOL9Q5SY16 702 aaKnown RBP13.67□□□□□ -0.22
RORA-207ENST00000558234 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.67□□□□□ -0.22
RORA-207ENST00000558234 DHX36Q9H2U1 1008 aaKnown RBP13.67□□□□□ -0.22
RORA-207ENST00000558234 SLC4A4Q9Y6R1 1079 aa13.67□□□□□ -0.22
RORA-207ENST00000558234 UNCXA6NJT0 531 aa13.67□□□□□ -0.22
RORA-207ENST00000558234 JAG1P78504 1218 aa13.67□□□□□ -0.22
RORA-207ENST00000558234 CDCA5Q96FF9 252 aa13.67□□□□□ -0.22
RORA-207ENST00000558234 CYP2D6P10635 497 aa13.67□□□□□ -0.22
RORA-207ENST00000558234 EXOSC10Q01780 885 aaKnown RBP13.67□□□□□ -0.22
RORA-207ENST00000558234 FSTL1Q12841 308 aa13.67□□□□□ -0.22
RORA-207ENST00000558234 STAG1Q8WVM7 1258 aa13.67□□□□□ -0.22
RORA-207ENST00000558234 TBC1D10CQ8IV04 446 aa13.66□□□□□ -0.22
RORA-207ENST00000558234 BCL11AQ9H165 835 aa13.66□□□□□ -0.22
RORA-207ENST00000558234 LDLRAD1Q5T700 205 aa13.66□□□□□ -0.22
RORA-207ENST00000558234 RUFY3Q7L099 469 aa13.66□□□□□ -0.22
RORA-207ENST00000558234 GUCY1A2P33402 732 aa13.66□□□□□ -0.22
RORA-207ENST00000558234 MAPKAPK5Q8IW41 473 aa13.66□□□□□ -0.22
RORA-207ENST00000558234 RBBP6Q7Z6E9 1792 aaKnown RBP13.65□□□□□ -0.22
RORA-207ENST00000558234 ORC4O43929 436 aa13.65□□□□□ -0.22
RORA-207ENST00000558234 EVCP57679 992 aa13.65□□□□□ -0.22
RORA-207ENST00000558234 TNFAIP1Q13829 316 aa13.65□□□□□ -0.22
RORA-207ENST00000558234 TOB2Q14106 344 aaPredicted RBP13.65□□□□□ -0.22
RORA-207ENST00000558234 BECN1Q14457 450 aa13.65□□□□□ -0.22
RORA-207ENST00000558234 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.65□□□□□ -0.22
RORA-207ENST00000558234 MYH6P13533 1939 aa13.65□□□□□ -0.22
RORA-207ENST00000558234 TOMM70O94826 608 aa13.65□□□□□ -0.22
RORA-207ENST00000558234 NBPF12Q5TAG4 269 aaPredicted RBP13.65□□□□□ -0.22
RORA-207ENST00000558234 CDC37L1Q7L3B6 337 aa13.65□□□□□ -0.22
RORA-207ENST00000558234 GLIS2Q9BZE0 524 aaPredicted RBP13.65□□□□□ -0.22
RORA-207ENST00000558234 USP2O75604 605 aaPredicted RBP13.65□□□□□ -0.22
RORA-207ENST00000558234 SLURP2P0DP57 97 aa13.65□□□□□ -0.22
RORA-207ENST00000558234 NT5C2P49902 561 aa13.65□□□□□ -0.22
RORA-207ENST00000558234 GPBP1L1Q9HC44 474 aaPredicted RBP13.65□□□□□ -0.22
RORA-207ENST00000558234 TCP10L2B9ZVM9 353 aa13.64□□□□□ -0.23
RORA-207ENST00000558234 U3KPZ7 1027 aaPredicted RBP13.64□□□□□ -0.23
RORA-207ENST00000558234 MYO1BO43795 1136 aa13.64□□□□□ -0.23
RORA-207ENST00000558234 FMR1Q06787 632 aaKnown RBP eCLIP13.64□□□□□ -0.23
RORA-207ENST00000558234 HERC5Q9UII4 1024 aaKnown RBP13.64□□□□□ -0.23
RORA-207ENST00000558234 SCAF8Q9UPN6 1271 aaKnown RBP13.64□□□□□ -0.23
RORA-207ENST00000558234 CYP2D7A0A087X1C5 515 aa13.64□□□□□ -0.23
RORA-207ENST00000558234 KLRG1Q96E93 195 aa13.64□□□□□ -0.23
RORA-207ENST00000558234 COL11A1P12107 1806 aaPredicted RBP13.63□□□□□ -0.23
RORA-207ENST00000558234 TRAF5O00463 557 aa13.63□□□□□ -0.23
RORA-207ENST00000558234 PPARAQ07869 468 aa13.63□□□□□ -0.23
RORA-207ENST00000558234 NID2Q14112 1375 aa13.63□□□□□ -0.23
RORA-207ENST00000558234 NEDD4P46934 1319 aa13.63□□□□□ -0.23
RORA-207ENST00000558234 PCP11498 1178 aaKnown RBP13.63□□□□□ -0.23
RORA-207ENST00000558234 RBM26Q5T8P6 1007 aaKnown RBP13.63□□□□□ -0.23
RORA-207ENST00000558234 MAP1SQ66K74 1059 aaPredicted RBP13.63□□□□□ -0.23
RORA-207ENST00000558234 INTS4Q96HW7 963 aaKnown RBP13.63□□□□□ -0.23
RORA-207ENST00000558234 PI4KBQ9UBF8 816 aa13.63□□□□□ -0.23
RORA-207ENST00000558234 USP17L12C9JPN9 530 aa13.63□□□□□ -0.23
RORA-207ENST00000558234 USP17L21D6R901 530 aa13.63□□□□□ -0.23
RORA-207ENST00000558234 MCM2P49736 904 aa13.63□□□□□ -0.23
RORA-207ENST00000558234 KRT26Q7Z3Y9 468 aa13.63□□□□□ -0.23
RORA-207ENST00000558234 USP48Q86UV5 1035 aa13.63□□□□□ -0.23
RORA-207ENST00000558234 SIAH1Q8IUQ4 282 aa13.63□□□□□ -0.23
RORA-207ENST00000558234 TMX3Q96JJ7 454 aa13.63□□□□□ -0.23
RORA-207ENST00000558234 RASA1P20936 1047 aa13.62□□□□□ -0.23
RORA-207ENST00000558234 RPS6KB1P23443 525 aa13.62□□□□□ -0.23
RORA-207ENST00000558234 RBM5P52756 815 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■■□□□ 12.9
RORA-207ENST00000558234 SMC1BQ8NDV3 1235 aa13.62□□□□□ -0.23
RORA-207ENST00000558234 WDR19Q8NEZ3 1342 aa13.62□□□□□ -0.23
RORA-207ENST00000558234 MCCP23508 829 aa13.62□□□□□ -0.23
RORA-207ENST00000558234 AK2P54819 239 aa13.62□□□□□ -0.23
RORA-207ENST00000558234 FKBP1BP68106 108 aa13.62□□□□□ -0.23
RORA-207ENST00000558234 FOXP4Q8IVH2 680 aaPredicted RBP13.62□□□□□ -0.23
RORA-207ENST00000558234 DCPSQ96C86 337 aaKnown RBP13.62□□□□□ -0.23
RORA-207ENST00000558234 HHIPL1Q96JK4 782 aa13.62□□□□□ -0.23
RORA-207ENST00000558234 ZDHHC9Q9Y397 364 aa13.62□□□□□ -0.23
RORA-207ENST00000558234 LARGE1O95461 756 aa13.62□□□□□ -0.23
RORA-207ENST00000558234 TCP11L1Q9NUJ3 509 aa13.62□□□□□ -0.23
RORA-207ENST00000558234 TNNI2P48788 182 aa13.61□□□□□ -0.23
RORA-207ENST00000558234 MB21D2Q8IYB1 491 aaPredicted RBP13.61□□□□□ -0.23
RORA-207ENST00000558234 SWAP70Q9UH65 585 aa13.61□□□□□ -0.23
RORA-207ENST00000558234 NEK4P51957 841 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms