RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ATRNL1Q5VV63 1379 aa10.79□□□□□ -0.68
SPG11-207ENST00000558138 TCRBV5S4A2TA0A5A2 114 aa10.79□□□□□ -0.68
SPG11-207ENST00000558138 TRPA1O75762 1119 aa10.79□□□□□ -0.68
SPG11-207ENST00000558138 GTF2A2P52657 109 aa10.79□□□□□ -0.68
SPG11-207ENST00000558138 LBX1P52954 281 aa10.79□□□□□ -0.68
SPG11-207ENST00000558138 SCYL3Q8IZE3 742 aa10.79□□□□□ -0.68
SPG11-207ENST00000558138 CNKSR2Q8WXI2 1034 aa10.79□□□□□ -0.68
SPG11-207ENST00000558138 APPBP2Q92624 585 aa10.79□□□□□ -0.68
SPG11-207ENST00000558138 RIOK1Q9BRS2 568 aaKnown RBP10.79□□□□□ -0.68
SPG11-207ENST00000558138 MYH1P12882 1939 aa10.79□□□□□ -0.68
SPG11-207ENST00000558138 COL2A1P02458 1487 aaPredicted RBP10.79□□□□□ -0.68
SPG11-207ENST00000558138 FOCADQ5VW36 1801 aa10.79□□□□□ -0.68
SPG11-207ENST00000558138 CDK5RAP2Q96SN8 1893 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 CCL15-CCL14A0A0B4J2E2 113 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 SPDYE5A6NIY4 337 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 PRKAB2O43741 272 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 CTNND1O60716 968 aaKnown RBP10.78□□□□□ -0.68
SPG11-207ENST00000558138 CHGBP05060 677 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 SLURP2P0DP57 97 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 TDO2P48775 406 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 PPATQ06203 517 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 SNAPC2Q13487 334 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 CCL15Q16663 113 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 FOXP4Q8IVH2 680 aaPredicted RBP10.78□□□□□ -0.68
SPG11-207ENST00000558138 CCDC136Q96JN2 1154 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 PUS7LQ9H0K6 701 aaKnown RBP10.78□□□□□ -0.68
SPG11-207ENST00000558138 ATP8A2Q9NTI2 1148 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 RNF186Q9NXI6 227 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 STAP2Q9UGK3 403 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 SERPINB13Q9UIV8 391 aa10.78□□□□□ -0.68
SPG11-207ENST00000558138 MPHOSPH10O00566 681 aaKnown RBP10.77□□□□□ -0.69
SPG11-207ENST00000558138 GPAA1O43292 621 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 TBC1D12O60347 775 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 GDF11O95390 407 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 ALDH1A1P00352 501 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 HSPA8P11142 646 aaKnown RBP10.77□□□□□ -0.69
SPG11-207ENST00000558138 CETPP11597 493 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 GNAT2P19087 354 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 GJA5P36382 358 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 INHBEP58166 350 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 PPIL2Q13356 520 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 NOL9Q5SY16 702 aaKnown RBP10.77□□□□□ -0.69
SPG11-207ENST00000558138 PLEKHM2Q8IWE5 1019 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 NACAP1Q9BZK3 213 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 AS3MTQ9HBK9 375 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 SAGE1Q9NXZ1 904 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 ZNF112Q9UJU3 913 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 ZHX2Q9Y6X8 837 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 SALL3Q9BXA9 1300 aa10.77□□□□□ -0.69
SPG11-207ENST00000558138 DOCK1Q14185 1865 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 TRIM75PA6NK02 468 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 M0R2C6 588 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 IRF6O14896 467 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 TBC1D8O95759 1140 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 PTPRAP18433 802 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 TM4SF4P48230 202 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 GADL1Q6ZQY3 521 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 IFNL1Q8IU54 200 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 STK11IPQ8N1F8 1099 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 OSBP2Q969R2 916 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 FEZ1Q99689 392 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 CABP5Q9NP86 173 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 DCP1AQ9NPI6 582 aaPredicted RBP10.76□□□□□ -0.69
SPG11-207ENST00000558138 DIAPH3Q9NSV4 1193 aa10.76□□□□□ -0.69
SPG11-207ENST00000558138 USP17L5A8MUK1 530 aa10.75□□□□□ -0.69
SPG11-207ENST00000558138 PHF20L1A8MW92 1017 aa10.75□□□□□ -0.69
SPG11-207ENST00000558138 MINDY4BA8MYZ0 360 aa10.75□□□□□ -0.69
SPG11-207ENST00000558138 ASNSP08243 561 aa10.75□□□□□ -0.69
SPG11-207ENST00000558138 CYP2D6P10635 497 aa10.75□□□□□ -0.69
SPG11-207ENST00000558138 CAP2P40123 477 aa10.75□□□□□ -0.69
SPG11-207ENST00000558138 RAB3GAP1Q15042 981 aa10.75□□□□□ -0.69
SPG11-207ENST00000558138 TAF1CQ15572 869 aaPredicted RBP10.75□□□□□ -0.69
SPG11-207ENST00000558138 CERKLQ49MI3 558 aaPredicted RBP10.75□□□□□ -0.69
SPG11-207ENST00000558138 CENPQQ7L2Z9 268 aaPredicted RBP10.75□□□□□ -0.69
SPG11-207ENST00000558138 CCDC84Q86UT8 332 aaPredicted RBP10.75□□□□□ -0.69
SPG11-207ENST00000558138 EHD4Q9H223 541 aa10.75□□□□□ -0.69
SPG11-207ENST00000558138 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.75□□□□□ -0.69
SPG11-207ENST00000558138 ARPP21Q9UBL0 812 aaPredicted RBP10.75□□□□□ -0.69
SPG11-207ENST00000558138 ATAD5Q96QE3 1844 aa10.74□□□□□ -0.69
SPG11-207ENST00000558138 USP17L12C9JPN9 530 aa10.74□□□□□ -0.69
SPG11-207ENST00000558138 USP17L21D6R901 530 aa10.74□□□□□ -0.69
SPG11-207ENST00000558138 HIP1O00291 1037 aa10.74□□□□□ -0.69
SPG11-207ENST00000558138 PLCD1P51178 756 aa10.74□□□□□ -0.69
SPG11-207ENST00000558138 ABCB5Q2M3G0 1257 aa10.74□□□□□ -0.69
SPG11-207ENST00000558138 ZMYM1Q5SVZ6 1142 aa10.74□□□□□ -0.69
SPG11-207ENST00000558138 CCDC129Q6ZRS4 1044 aa10.74□□□□□ -0.69
SPG11-207ENST00000558138 STRBPQ96SI9 672 aaKnown RBP10.74□□□□□ -0.69
SPG11-207ENST00000558138 SEC62Q99442 399 aaKnown RBP10.74□□□□□ -0.69
SPG11-207ENST00000558138 TBC1D2Q9BYX2 928 aa10.74□□□□□ -0.69
SPG11-207ENST00000558138 NAPBQ9H115 298 aa10.74□□□□□ -0.69
SPG11-207ENST00000558138 TMOD4Q9NZQ9 345 aa10.74□□□□□ -0.69
SPG11-207ENST00000558138 SWAP70Q9UH65 585 aa10.74□□□□□ -0.69
SPG11-207ENST00000558138 BAZ2AQ9UIF9 1905 aaKnown RBP10.74□□□□□ -0.69
SPG11-207ENST00000558138 CYP2D7A0A087X1C5 515 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 IGF2BP3O00425 579 aaKnown RBP eCLIP10.73□□□□□ -0.69
SPG11-207ENST00000558138 GH2P01242 217 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 SLC3A2P08195 630 aaKnown RBP10.73□□□□□ -0.69
SPG11-207ENST00000558138 PDE4AP27815 886 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 MFAP1P55081 439 aaKnown RBP10.73□□□□□ -0.69
SPG11-207ENST00000558138 MAP3K10Q02779 954 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms