RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 TXNRD2Q9NNW7 524 aa12.67□□□□□ -0.38
ABCD4-227ENST00000557554 LRRFIP2Q9Y608 721 aaKnown RBP12.67□□□□□ -0.38
ABCD4-227ENST00000557554 DOCK2Q92608 1830 aa12.67□□□□□ -0.38
ABCD4-227ENST00000557554 PIEZO1Q92508 2521 aa12.66□□□□□ -0.38
ABCD4-227ENST00000557554 GRM8O00222 908 aa12.66□□□□□ -0.38
ABCD4-227ENST00000557554 RGS3P49796 1198 aa12.66□□□□□ -0.38
ABCD4-227ENST00000557554 RTP1P59025 263 aa12.66□□□□□ -0.38
ABCD4-227ENST00000557554 SPP2Q13103 211 aa12.66□□□□□ -0.38
ABCD4-227ENST00000557554 FKBP5Q13451 457 aaPredicted RBP12.66□□□□□ -0.38
ABCD4-227ENST00000557554 TWISTNBQ3B726 338 aaPredicted RBP12.66□□□□□ -0.38
ABCD4-227ENST00000557554 Q3C1V9 767 aa12.66□□□□□ -0.38
ABCD4-227ENST00000557554 LRRC24Q50LG9 513 aa12.66□□□□□ -0.38
ABCD4-227ENST00000557554 SH3D19Q5HYK7 790 aa12.66□□□□□ -0.38
ABCD4-227ENST00000557554 POTEEQ6S8J3 1075 aa12.66□□□□□ -0.38
ABCD4-227ENST00000557554 WDR66Q8TBY9 1149 aa12.66□□□□□ -0.38
ABCD4-227ENST00000557554 SOCS4Q8WXH5 440 aa12.66□□□□□ -0.38
ABCD4-227ENST00000557554 PRKAG2Q9UGJ0 569 aa12.66□□□□□ -0.38
ABCD4-227ENST00000557554 CACNA1FO60840 1977 aa12.66□□□□□ -0.38
ABCD4-227ENST00000557554 KIF16BQ96L93 1317 aa12.65□□□□□ -0.38
ABCD4-227ENST00000557554 TRIM43BA6NCK2 446 aa12.65□□□□□ -0.38
ABCD4-227ENST00000557554 TBC1D12O60347 775 aa12.65□□□□□ -0.38
ABCD4-227ENST00000557554 ZKSCAN1P17029 563 aaPredicted RBP12.65□□□□□ -0.38
ABCD4-227ENST00000557554 FGFR2P21802 821 aa12.65□□□□□ -0.38
ABCD4-227ENST00000557554 SLC39A5Q6ZMH5 540 aa12.65□□□□□ -0.38
ABCD4-227ENST00000557554 ZNF280CQ8ND82 737 aa12.65□□□□□ -0.38
ABCD4-227ENST00000557554 TSR2Q969E8 191 aaKnown RBP12.65□□□□□ -0.38
ABCD4-227ENST00000557554 TRIM43Q96BQ3 446 aaPredicted RBP12.65□□□□□ -0.38
ABCD4-227ENST00000557554 P2RX7Q99572 595 aaKnown RBP12.65□□□□□ -0.38
ABCD4-227ENST00000557554 C1QTNF1Q9BXJ1 281 aa12.65□□□□□ -0.38
ABCD4-227ENST00000557554 RBPJLQ9UBG7 517 aa12.65□□□□□ -0.38
ABCD4-227ENST00000557554 RFX7Q2KHR2 1363 aa12.65□□□□□ -0.38
ABCD4-227ENST00000557554 MYO9BQ13459 2157 aa12.64□□□□□ -0.39
ABCD4-227ENST00000557554 F6X3S4 739 aa12.64□□□□□ -0.39
ABCD4-227ENST00000557554 DNM1LO00429 736 aa12.64□□□□□ -0.39
ABCD4-227ENST00000557554 IGHA2P01877 340 aa12.64□□□□□ -0.39
ABCD4-227ENST00000557554 ITGB8P26012 769 aa12.64□□□□□ -0.39
ABCD4-227ENST00000557554 PRDX5P30044 214 aa12.64□□□□□ -0.39
ABCD4-227ENST00000557554 HOXA7P31268 230 aaPredicted RBP12.64□□□□□ -0.39
ABCD4-227ENST00000557554 EPHB4P54760 987 aa12.64□□□□□ -0.39
ABCD4-227ENST00000557554 HMGCS2P54868 508 aa12.64□□□□□ -0.39
ABCD4-227ENST00000557554 PABPC4Q13310 644 aaKnown RBP eCLIP12.64□□□□□ -0.39
ABCD4-227ENST00000557554 SNX17Q15036 470 aa12.64□□□□□ -0.39
ABCD4-227ENST00000557554 WDR43Q15061 677 aaKnown RBP eCLIP12.64□□□□□ -0.39
ABCD4-227ENST00000557554 SH3RF1Q7Z6J0 888 aa12.64□□□□□ -0.39
ABCD4-227ENST00000557554 GPRC5AQ8NFJ5 357 aa12.64□□□□□ -0.39
ABCD4-227ENST00000557554 LPAR1Q92633 364 aa12.64□□□□□ -0.39
ABCD4-227ENST00000557554 UHRF1Q96T88 793 aaPredicted RBP12.64□□□□□ -0.39
ABCD4-227ENST00000557554 MRPS5P82675 430 aaKnown RBP12.63□□□□□ -0.39
ABCD4-227ENST00000557554 PDE3AQ14432 1141 aa12.63□□□□□ -0.39
ABCD4-227ENST00000557554 RRP1BQ14684 758 aaKnown RBP12.63□□□□□ -0.39
ABCD4-227ENST00000557554 PORCNQ9H237 461 aa12.63□□□□□ -0.39
ABCD4-227ENST00000557554 ZNF576Q9H609 170 aa12.63□□□□□ -0.39
ABCD4-227ENST00000557554 DDX4Q9NQI0 724 aaKnown RBP12.63□□□□□ -0.39
ABCD4-227ENST00000557554 FLRT1Q9NZU1 646 aa12.63□□□□□ -0.39
ABCD4-227ENST00000557554 DDX20Q9UHI6 824 aaKnown RBP12.63□□□□□ -0.39
ABCD4-227ENST00000557554 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
ABCD4-227ENST00000557554 MAPK4P31152 587 aa12.62□□□□□ -0.39
ABCD4-227ENST00000557554 RGS2P41220 211 aa12.62□□□□□ -0.39
ABCD4-227ENST00000557554 METTL24Q5JXM2 366 aa12.62□□□□□ -0.39
ABCD4-227ENST00000557554 AKNAD1Q5T1N1 836 aa12.62□□□□□ -0.39
ABCD4-227ENST00000557554 C1orf53Q5VUE5 145 aa12.62□□□□□ -0.39
ABCD4-227ENST00000557554 GPR142Q7Z601 462 aa12.62□□□□□ -0.39
ABCD4-227ENST00000557554 PDLIM7Q9NR12 457 aa12.62□□□□□ -0.39
ABCD4-227ENST00000557554 THEGQ9P2T0 379 aa12.62□□□□□ -0.39
ABCD4-227ENST00000557554 ATP11BQ9Y2G3 1177 aa12.62□□□□□ -0.39
ABCD4-227ENST00000557554 TCF20Q9UGU0 1960 aaKnown RBP12.61□□□□□ -0.39
ABCD4-227ENST00000557554 CHD9Q3L8U1 2897 aa12.61□□□□□ -0.39
ABCD4-227ENST00000557554 REV3LO60673 3130 aa12.61□□□□□ -0.39
ABCD4-227ENST00000557554 XIRP2A4UGR9 3374 aa12.61□□□□□ -0.39
ABCD4-227ENST00000557554 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.61□□□□□ -0.39
ABCD4-227ENST00000557554 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.61□□□□□ -0.39
ABCD4-227ENST00000557554 BMP1P13497 986 aa12.61□□□□□ -0.39
ABCD4-227ENST00000557554 DNAJB2P25686 324 aa12.61□□□□□ -0.39
ABCD4-227ENST00000557554 RABL6Q3YEC7 729 aaPredicted RBP12.61□□□□□ -0.39
ABCD4-227ENST00000557554 TRPV1Q8NER1 839 aa12.61□□□□□ -0.39
ABCD4-227ENST00000557554 SUCLG2Q96I99 432 aa12.61□□□□□ -0.39
ABCD4-227ENST00000557554 APBA2Q99767 749 aa12.61□□□□□ -0.39
ABCD4-227ENST00000557554 LRFN3Q9BTN0 628 aa12.61□□□□□ -0.39
ABCD4-227ENST00000557554 TBC1D2Q9BYX2 928 aa12.61□□□□□ -0.39
ABCD4-227ENST00000557554 OSBPL5Q9H0X9 879 aaPredicted RBP12.61□□□□□ -0.39
ABCD4-227ENST00000557554 GAKO14976 1311 aa12.61□□□□□ -0.39
ABCD4-227ENST00000557554 MYH2Q9UKX2 1941 aa12.6□□□□□ -0.39
ABCD4-227ENST00000557554 MYH13Q9UKX3 1938 aa12.6□□□□□ -0.39
ABCD4-227ENST00000557554 MSCO60682 206 aa12.6□□□□□ -0.39
ABCD4-227ENST00000557554 VAMP4O75379 141 aa12.6□□□□□ -0.39
ABCD4-227ENST00000557554 LDHBP07195 334 aaKnown RBP12.6□□□□□ -0.39
ABCD4-227ENST00000557554 CAP2P40123 477 aa12.6□□□□□ -0.39
ABCD4-227ENST00000557554 HERVK_113P62684 666 aa12.6□□□□□ -0.39
ABCD4-227ENST00000557554 TRIM60Q495X7 471 aa12.6□□□□□ -0.39
ABCD4-227ENST00000557554 ZSCAN29Q8IWY8 852 aaPredicted RBP12.6□□□□□ -0.39
ABCD4-227ENST00000557554 PPM1EQ8WY54 764 aa12.6□□□□□ -0.39
ABCD4-227ENST00000557554 FAM163AQ96GL9 167 aaPredicted RBP12.6□□□□□ -0.39
ABCD4-227ENST00000557554 RNPC3Q96LT9 517 aaKnown RBP12.6□□□□□ -0.39
ABCD4-227ENST00000557554 NECAB3Q96P71 396 aaPredicted RBP12.6□□□□□ -0.39
ABCD4-227ENST00000557554 PRDM5Q9NQX1 630 aaPredicted RBP12.6□□□□□ -0.39
ABCD4-227ENST00000557554 C9orf78Q9NZ63 289 aaPredicted RBP12.6□□□□□ -0.39
ABCD4-227ENST00000557554 UTYO14607 1347 aa12.6□□□□□ -0.39
ABCD4-227ENST00000557554 SALL1Q9NSC2 1324 aa12.6□□□□□ -0.39
ABCD4-227ENST00000557554 FAM196BA6NMK8 535 aa12.59□□□□□ -0.39
ABCD4-227ENST00000557554 USP17L5A8MUK1 530 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms