RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SEPT6Q14141 434 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 LSRQ86X29 649 aaPredicted RBP2.71□□□□□ -1.98
HIF1A-212ENST00000557538 MFSD2AQ8NA29 543 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 WDR89Q96FK6 387 aaPredicted RBP2.71□□□□□ -1.98
HIF1A-212ENST00000557538 FANCD2OSQ96PS1 177 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 MINDY4BA8MYZ0 360 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 WISP1O95388 367 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 ECEL1O95672 775 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 NME1P15531 152 aaKnown RBP2.7□□□□□ -1.98
HIF1A-212ENST00000557538 AMPD1P23109 780 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 EIF6P56537 245 aaKnown RBP2.7□□□□□ -1.98
HIF1A-212ENST00000557538 MLECQ14165 292 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 ZC3H12BQ5HYM0 836 aaKnown RBP2.7□□□□□ -1.98
HIF1A-212ENST00000557538 FAM214BQ7L5A3 538 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 HID1Q8IV36 788 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 FBXO27Q8NI29 283 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.7□□□□□ -1.98
HIF1A-212ENST00000557538 CARD10Q9BWT7 1032 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 TANGO6Q9C0B7 1094 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 UBP1Q9NZI7 540 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 EFR3BQ9Y2G0 817 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 PCDHB14Q9Y5E9 798 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 IGF2BP3O00425 579 aaKnown RBP eCLIP2.7□□□□□ -1.98
HIF1A-212ENST00000557538 HTR3BO95264 441 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 BPNT1O95861 308 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 SLBPQ14493 270 aaKnown RBP eCLIP2.7□□□□□ -1.98
HIF1A-212ENST00000557538 INPP5AQ14642 412 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 LONRF2Q1L5Z9 754 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 MAP1SQ66K74 1059 aaPredicted RBP2.7□□□□□ -1.98
HIF1A-212ENST00000557538 PPP1R13LQ8WUF5 828 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 PLPPR2Q96GM1 343 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 FBXL18Q96ME1 805 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 MKNK2Q9HBH9 465 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 PCDHA4Q9UN74 947 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 SHROOM4Q9ULL8 1493 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 RGS13O14921 159 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 NEFMP07197 916 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 NOS3P29474 1203 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 RBM10P98175 930 aaKnown RBP2.7□□□□□ -1.98
HIF1A-212ENST00000557538 MBTPS1Q14703 1052 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 NFE2L2Q16236 605 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 ZNF746Q6NUN9 644 aaPredicted RBP2.7□□□□□ -1.98
HIF1A-212ENST00000557538 WFDC12Q8WWY7 111 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 ATG4CQ96DT6 458 aa2.7□□□□□ -1.98
HIF1A-212ENST00000557538 A0A087WZG4 1122 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 STK10O94804 968 aaKnown RBP2.69□□□□□ -1.98
HIF1A-212ENST00000557538 LRIG2O94898 1065 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 LMNB1P20700 586 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 GUCY2CP25092 1073 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 YARSP54577 528 aaKnown RBP2.69□□□□□ -1.98
HIF1A-212ENST00000557538 FAM160A1Q05DH4 1040 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 MAP3K11Q16584 847 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 SEZ6Q53EL9 994 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 TXNRD3Q86VQ6 643 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 ST13P5Q8NFI4 369 aaPredicted RBP2.69□□□□□ -1.98
HIF1A-212ENST00000557538 DNAJB8Q8NHS0 232 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 ACSF2Q96CM8 615 aaPredicted RBP2.69□□□□□ -1.98
HIF1A-212ENST00000557538 TMEM87BQ96K49 555 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 FAM83CQ9BQN1 747 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 ZNF408Q9H9D4 720 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 TJP2Q9UDY2 1190 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 ZNF214Q9UL59 606 aaPredicted RBP2.69□□□□□ -1.98
HIF1A-212ENST00000557538 ENPP3O14638 875 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 DDX3YO15523 660 aaKnown RBP2.69□□□□□ -1.98
HIF1A-212ENST00000557538 APBA3O96018 575 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 H2AFB1P0C5Y9 115 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 H2AFB2P0C5Z0 115 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 LIG1P18858 919 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 RASGRF1Q13972 1273 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 NCAPHQ15003 741 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 NUTM2GQ5VZR2 741 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 CLEC10AQ8IUN9 316 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 CKAP2LQ8IYA6 745 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 MYRFLQ96LU7 910 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 PHAXQ9H814 394 aaKnown RBP2.69□□□□□ -1.98
HIF1A-212ENST00000557538 ACTL7BQ9Y614 415 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 A0A1W2PQH9 124 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 UPK3BL1B0FP48 263 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 UPK3BL2E5RIL1 263 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 GRK4P32298 578 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 TESK1Q15569 626 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 WIPI1Q5MNZ9 446 aaPredicted RBP2.69□□□□□ -1.98
HIF1A-212ENST00000557538 MPRIPQ6WCQ1 1025 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 FAM20CQ8IXL6 584 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 ARMC10Q8N2F6 343 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 KCNB2Q92953 911 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 YIPF2Q9BWQ6 316 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 FOXQ1Q9C009 403 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 OSBPL2Q9H1P3 480 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 CEP131Q9UPN4 1083 aa2.69□□□□□ -1.98
HIF1A-212ENST00000557538 IGHA1P01876 353 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 ACRP10323 421 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 ACAD11Q709F0 780 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 NLRC3Q7RTR2 1065 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 SLC7A3Q8WY07 619 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 ASPNQ9BXN1 380 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 RRAGCQ9HB90 399 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 CBX8Q9HC52 389 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 ETFBP38117 255 aa2.68□□□□□ -1.98
HIF1A-212ENST00000557538 PMS1P54277 932 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms