RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 CALCOCO2Q13137 446 aa9.35□□□□□ -0.91
CHD8-213ENST00000557364 TAOK1Q7L7X3 1001 aa9.35□□□□□ -0.91
CHD8-213ENST00000557364 SLFN12Q8IYM2 578 aa9.35□□□□□ -0.91
CHD8-213ENST00000557364 UBL4BQ8N7F7 174 aa9.35□□□□□ -0.91
CHD8-213ENST00000557364 CCDC17Q96LX7 622 aa9.35□□□□□ -0.91
CHD8-213ENST00000557364 CACYBPQ9HB71 228 aaKnown RBP9.35□□□□□ -0.91
CHD8-213ENST00000557364 INSRP06213 1382 aa9.35□□□□□ -0.91
CHD8-213ENST00000557364 CLASP1Q7Z460 1538 aa9.35□□□□□ -0.91
CHD8-213ENST00000557364 ODR4Q5SWX8 454 aa9.35□□□□□ -0.91
CHD8-213ENST00000557364 CCT6BQ92526 530 aa9.35□□□□□ -0.91
CHD8-213ENST00000557364 SMC6Q96SB8 1091 aa9.35□□□□□ -0.91
CHD8-213ENST00000557364 PLCD4Q9BRC7 762 aa9.35□□□□□ -0.91
CHD8-213ENST00000557364 GPCPD1Q9NPB8 672 aa9.35□□□□□ -0.91
CHD8-213ENST00000557364 LUC7L2Q9Y383 392 aaKnown RBP9.35□□□□□ -0.91
CHD8-213ENST00000557364 UQCRHLA0A096LP55 91 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 UQCRHP07919 91 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 HOXA7P31268 230 aaPredicted RBP9.34□□□□□ -0.91
CHD8-213ENST00000557364 DNA2P51530 1060 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 NONOQ15233 471 aaKnown RBP eCLIP9.34□□□□□ -0.91
CHD8-213ENST00000557364 MFSD14BQ5SR56 506 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 ARHGAP27Q6ZUM4 889 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 DHX58Q96C10 678 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 ADD3Q9UEY8 706 aaKnown RBP9.34□□□□□ -0.91
CHD8-213ENST00000557364 ANAPC4Q9UJX5 808 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 ZBTB21Q9ULJ3 1066 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 MLH3Q9UHC1 1453 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 PFDN6O15212 129 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 CTSWP56202 376 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 ABCA8O94911 1581 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 CTAGE15A4D2H0 777 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 DAPK3O43293 454 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 CTAGE8P0CG41 777 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 MAP7Q14244 749 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 CTAGE6Q86UF2 777 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 CTAGE4Q8IX94 777 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 CCDC26Q8TAB7 109 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 HAUS7Q99871 368 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 F13A1P00488 732 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 CWF19L2Q2TBE0 894 aaKnown RBP9.34□□□□□ -0.91
CHD8-213ENST00000557364 DPH6Q7L8W6 267 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 HELBQ8NG08 1087 aaPredicted RBP9.34□□□□□ -0.91
CHD8-213ENST00000557364 JARID2Q92833 1246 aaPredicted RBP9.34□□□□□ -0.91
CHD8-213ENST00000557364 FAM204AQ9H8W3 233 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 AGTPBP1Q9UPW5 1226 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 CCNT1O60563 726 aaKnown RBP9.34□□□□□ -0.91
CHD8-213ENST00000557364 BBOX1O75936 387 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 FAM160B1Q5W0V3 765 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 REXO1Q8N1G1 1221 aaKnown RBP9.34□□□□□ -0.91
CHD8-213ENST00000557364 MAIP1Q8WWC4 291 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 MKRN1Q9UHC7 482 aaKnown RBP9.34□□□□□ -0.91
CHD8-213ENST00000557364 PNMA3Q9UL41 463 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 FAM184BQ9ULE4 1060 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 SETD1BQ9UPS6 1966 aaKnown RBP9.34□□□□□ -0.91
CHD8-213ENST00000557364 GNG11P61952 73 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 LETM2Q2VYF4 491 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 MUM1L1Q5H9M0 696 aa9.34□□□□□ -0.91
CHD8-213ENST00000557364 TTF2Q9UNY4 1162 aaKnown RBP9.34□□□□□ -0.91
CHD8-213ENST00000557364 N4BP1O75113 896 aaKnown RBP9.34□□□□□ -0.92
CHD8-213ENST00000557364 UBXN1Q04323 297 aa9.34□□□□□ -0.92
CHD8-213ENST00000557364 PLCD3Q8N3E9 789 aa9.34□□□□□ -0.92
CHD8-213ENST00000557364 FEZ2Q9UHY8 353 aaPredicted RBP9.34□□□□□ -0.92
CHD8-213ENST00000557364 E7EVH7 732 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 KBTBD3Q8NAB2 608 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 CDHR1Q96JP9 859 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 FAM193BQ96PV7 902 aaPredicted RBP9.33□□□□□ -0.92
CHD8-213ENST00000557364 XDHP47989 1333 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 SH3BP5O60239 455 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 MYCLP12524 364 aaPredicted RBP9.33□□□□□ -0.92
CHD8-213ENST00000557364 HCLS1P14317 486 aaPredicted RBP9.33□□□□□ -0.92
CHD8-213ENST00000557364 ERCC5P28715 1186 aaPredicted RBP9.33□□□□□ -0.92
CHD8-213ENST00000557364 SAP30BPQ9UHR5 308 aaKnown RBP9.33□□□□□ -0.92
CHD8-213ENST00000557364 TRPC6Q9Y210 931 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 CALCRLQ16602 461 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 ARFGAP2Q8N6H7 521 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 SMC1BQ8NDV3 1235 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 ZKSCAN3Q9BRR0 538 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 PTPRKQ15262 1439 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 GOLGA8CPA6NN73 597 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 IVLP07476 585 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 KRT5P13647 590 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 YARSP54577 528 aaKnown RBP9.33□□□□□ -0.92
CHD8-213ENST00000557364 PDZD4Q76G19 769 aaPredicted RBP9.33□□□□□ -0.92
CHD8-213ENST00000557364 TRAF5O00463 557 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 FCHSD1Q86WN1 690 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 ZRANB1Q9UGI0 708 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 GPAA1O43292 621 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 POLR2BP30876 1174 aaKnown RBP9.33□□□□□ -0.92
CHD8-213ENST00000557364 UTP14CQ5TAP6 766 aaKnown RBP9.33□□□□□ -0.92
CHD8-213ENST00000557364 ARHGEF16Q5VV41 709 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 RAB11FIP4Q86YS3 637 aa9.33□□□□□ -0.92
CHD8-213ENST00000557364 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.33□□□□□ -0.92
CHD8-213ENST00000557364 FOSP01100 380 aaPredicted RBP9.32□□□□□ -0.92
CHD8-213ENST00000557364 CUL4BQ13620 913 aa9.32□□□□□ -0.92
CHD8-213ENST00000557364 ZBTB38Q8NAP3 1195 aaPredicted RBP9.32□□□□□ -0.92
CHD8-213ENST00000557364 ORAI2Q96SN7 254 aa9.32□□□□□ -0.92
CHD8-213ENST00000557364 ATP7BP35670 1465 aa9.32□□□□□ -0.92
CHD8-213ENST00000557364 TYW5A2RUC4 315 aaKnown RBP9.32□□□□□ -0.92
CHD8-213ENST00000557364 RIOK3O14730 519 aaKnown RBP9.32□□□□□ -0.92
CHD8-213ENST00000557364 PRPF6O94906 941 aaKnown RBP9.32□□□□□ -0.92
CHD8-213ENST00000557364 SP4Q02446 784 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms