RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 REV3LO60673 3130 aa16.71■□□□□ 0.27
ABCD4-224ENST00000556119 ATAD5Q96QE3 1844 aa16.7■□□□□ 0.26
ABCD4-224ENST00000556119 DDTLA6NHG4 134 aaPredicted RBP16.7■□□□□ 0.26
ABCD4-224ENST00000556119 PEX10O60683 326 aa16.7■□□□□ 0.26
ABCD4-224ENST00000556119 PDE8BO95263 885 aa16.7■□□□□ 0.26
ABCD4-224ENST00000556119 GRIN2CQ14957 1233 aa16.7■□□□□ 0.26
ABCD4-224ENST00000556119 WDR66Q8TBY9 1149 aa16.7■□□□□ 0.26
ABCD4-224ENST00000556119 USP6NLQ92738 828 aa16.7■□□□□ 0.26
ABCD4-224ENST00000556119 KAZALD1Q96I82 304 aa16.7■□□□□ 0.26
ABCD4-224ENST00000556119 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
ABCD4-224ENST00000556119 ENTPD3O75355 529 aa16.69■□□□□ 0.26
ABCD4-224ENST00000556119 ZKSCAN1P17029 563 aaPredicted RBP16.69■□□□□ 0.26
ABCD4-224ENST00000556119 PRDX5P30044 214 aa16.69■□□□□ 0.26
ABCD4-224ENST00000556119 RTP1P59025 263 aa16.69■□□□□ 0.26
ABCD4-224ENST00000556119 SPP2Q13103 211 aa16.69■□□□□ 0.26
ABCD4-224ENST00000556119 METTL24Q5JXM2 366 aa16.69■□□□□ 0.26
ABCD4-224ENST00000556119 TRMT44Q8IYL2 757 aaKnown RBP16.69■□□□□ 0.26
ABCD4-224ENST00000556119 IDI2Q9BXS1 227 aa16.69■□□□□ 0.26
ABCD4-224ENST00000556119 HMGCS2P54868 508 aa16.68■□□□□ 0.26
ABCD4-224ENST00000556119 PABPC4Q13310 644 aaKnown RBP eCLIP16.68■□□□□ 0.26
ABCD4-224ENST00000556119 SOCS4Q8WXH5 440 aa16.68■□□□□ 0.26
ABCD4-224ENST00000556119 BADQ92934 168 aa16.68■□□□□ 0.26
ABCD4-224ENST00000556119 ZSCAN29Q8IWY8 852 aaPredicted RBP16.67■□□□□ 0.26
ABCD4-224ENST00000556119 ATXN2LQ8WWM7 1075 aaKnown RBP16.67■□□□□ 0.26
ABCD4-224ENST00000556119 SUCLG2Q96I99 432 aa16.67■□□□□ 0.26
ABCD4-224ENST00000556119 TXNRD2Q9NNW7 524 aa16.67■□□□□ 0.26
ABCD4-224ENST00000556119 C9orf78Q9NZ63 289 aaPredicted RBP16.67■□□□□ 0.26
ABCD4-224ENST00000556119 KIF16BQ96L93 1317 aa16.67■□□□□ 0.26
ABCD4-224ENST00000556119 CHD9Q3L8U1 2897 aa16.67■□□□□ 0.26
ABCD4-224ENST00000556119 RFX7Q2KHR2 1363 aa16.66■□□□□ 0.26
ABCD4-224ENST00000556119 TCF20Q9UGU0 1960 aaKnown RBP16.66■□□□□ 0.26
ABCD4-224ENST00000556119 FGFR2P21802 821 aa16.66■□□□□ 0.26
ABCD4-224ENST00000556119 ZNF280CQ8ND82 737 aa16.66■□□□□ 0.26
ABCD4-224ENST00000556119 ADAMTS19Q8TE59 1207 aa16.66■□□□□ 0.26
ABCD4-224ENST00000556119 ASB2Q96Q27 587 aa16.66■□□□□ 0.26
ABCD4-224ENST00000556119 P2RX7Q99572 595 aaKnown RBP16.66■□□□□ 0.26
ABCD4-224ENST00000556119 ATP11BQ9Y2G3 1177 aa16.66■□□□□ 0.26
ABCD4-224ENST00000556119 PIEZO1Q92508 2521 aa16.66■□□□□ 0.26
ABCD4-224ENST00000556119 SYNGAP1Q96PV0 1343 aa16.66■□□□□ 0.26
ABCD4-224ENST00000556119 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
ABCD4-224ENST00000556119 Q3C1V9 767 aa16.65■□□□□ 0.26
ABCD4-224ENST00000556119 SH3D19Q5HYK7 790 aa16.65■□□□□ 0.26
ABCD4-224ENST00000556119 MORN1Q5T089 497 aa16.65■□□□□ 0.26
ABCD4-224ENST00000556119 DDX4Q9NQI0 724 aaKnown RBP16.65■□□□□ 0.26
ABCD4-224ENST00000556119 TBC1D12O60347 775 aa16.64■□□□□ 0.25
ABCD4-224ENST00000556119 LDHBP07195 334 aaKnown RBP16.64■□□□□ 0.25
ABCD4-224ENST00000556119 IFIT1P09914 478 aaKnown RBP16.64■□□□□ 0.25
ABCD4-224ENST00000556119 RGS2P41220 211 aa16.64■□□□□ 0.25
ABCD4-224ENST00000556119 PDE3AQ14432 1141 aa16.64■□□□□ 0.25
ABCD4-224ENST00000556119 GPRC5AQ8NFJ5 357 aa16.64■□□□□ 0.25
ABCD4-224ENST00000556119 LPAR1Q92633 364 aa16.64■□□□□ 0.25
ABCD4-224ENST00000556119 PORCNQ9H237 461 aa16.64■□□□□ 0.25
ABCD4-224ENST00000556119 PRDM5Q9NQX1 630 aaPredicted RBP16.64■□□□□ 0.25
ABCD4-224ENST00000556119 FAM196BA6NMK8 535 aa16.63■□□□□ 0.25
ABCD4-224ENST00000556119 DNM1LO00429 736 aa16.63■□□□□ 0.25
ABCD4-224ENST00000556119 MAPK4P31152 587 aa16.63■□□□□ 0.25
ABCD4-224ENST00000556119 SLC39A5Q6ZMH5 540 aa16.63■□□□□ 0.25
ABCD4-224ENST00000556119 GPR142Q7Z601 462 aa16.63■□□□□ 0.25
ABCD4-224ENST00000556119 SH3RF1Q7Z6J0 888 aa16.63■□□□□ 0.25
ABCD4-224ENST00000556119 UHRF1Q96T88 793 aaPredicted RBP16.63■□□□□ 0.25
ABCD4-224ENST00000556119 RBPJLQ9UBG7 517 aa16.63■□□□□ 0.25
ABCD4-224ENST00000556119 DDX20Q9UHI6 824 aaKnown RBP16.63■□□□□ 0.25
ABCD4-224ENST00000556119 TRIM43BA6NCK2 446 aa16.62■□□□□ 0.25
ABCD4-224ENST00000556119 HOXA7P31268 230 aaPredicted RBP16.62■□□□□ 0.25
ABCD4-224ENST00000556119 HERVK_113P62684 666 aa16.62■□□□□ 0.25
ABCD4-224ENST00000556119 RRP1BQ14684 758 aaKnown RBP16.62■□□□□ 0.25
ABCD4-224ENST00000556119 PUM3Q15397 648 aaKnown RBP16.62■□□□□ 0.25
ABCD4-224ENST00000556119 KLHDC4Q8TBB5 520 aa16.62■□□□□ 0.25
ABCD4-224ENST00000556119 PPM1EQ8WY54 764 aa16.62■□□□□ 0.25
ABCD4-224ENST00000556119 TRIM43Q96BQ3 446 aaPredicted RBP16.62■□□□□ 0.25
ABCD4-224ENST00000556119 APBA2Q99767 749 aa16.62■□□□□ 0.25
ABCD4-224ENST00000556119 OSBPL5Q9H0X9 879 aaPredicted RBP16.62■□□□□ 0.25
ABCD4-224ENST00000556119 FLRT1Q9NZU1 646 aa16.62■□□□□ 0.25
ABCD4-224ENST00000556119 NBPF7P0C2Y1 421 aaPredicted RBP16.61■□□□□ 0.25
ABCD4-224ENST00000556119 EPHB4P54760 987 aa16.61■□□□□ 0.25
ABCD4-224ENST00000556119 IRX3P78415 501 aaPredicted RBP16.61■□□□□ 0.25
ABCD4-224ENST00000556119 PICALMQ13492 652 aa16.61■□□□□ 0.25
ABCD4-224ENST00000556119 RABL6Q3YEC7 729 aaPredicted RBP16.61■□□□□ 0.25
ABCD4-224ENST00000556119 POTEEQ6S8J3 1075 aa16.61■□□□□ 0.25
ABCD4-224ENST00000556119 PLEKHH3Q7Z736 793 aa16.61■□□□□ 0.25
ABCD4-224ENST00000556119 RNPC3Q96LT9 517 aaKnown RBP16.61■□□□□ 0.25
ABCD4-224ENST00000556119 TBC1D2Q9BYX2 928 aa16.61■□□□□ 0.25
ABCD4-224ENST00000556119 ZNF576Q9H609 170 aa16.61■□□□□ 0.25
ABCD4-224ENST00000556119 BICC1Q9H694 974 aaKnown RBP16.61■□□□□ 0.25
ABCD4-224ENST00000556119 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.61■□□□□ 0.25
ABCD4-224ENST00000556119 PDLIM7Q9NR12 457 aa16.61■□□□□ 0.25
ABCD4-224ENST00000556119 THEGQ9P2T0 379 aa16.61■□□□□ 0.25
ABCD4-224ENST00000556119 ARIH1Q9Y4X5 557 aaPredicted RBP16.61■□□□□ 0.25
ABCD4-224ENST00000556119 GAKO14976 1311 aa16.61■□□□□ 0.25
ABCD4-224ENST00000556119 CHD7Q9P2D1 2997 aa16.61■□□□□ 0.25
ABCD4-224ENST00000556119 USP17L5A8MUK1 530 aa16.6■□□□□ 0.25
ABCD4-224ENST00000556119 VAMP4O75379 141 aa16.6■□□□□ 0.25
ABCD4-224ENST00000556119 ALDH1L1O75891 902 aa16.6■□□□□ 0.25
ABCD4-224ENST00000556119 DNAJB2P25686 324 aa16.6■□□□□ 0.25
ABCD4-224ENST00000556119 ITGB8P26012 769 aa16.6■□□□□ 0.25
ABCD4-224ENST00000556119 CNGA1P29973 690 aa16.6■□□□□ 0.25
ABCD4-224ENST00000556119 ERVK-9P63128 1117 aa16.6■□□□□ 0.25
ABCD4-224ENST00000556119 ERVK-24P63145 666 aa16.6■□□□□ 0.25
ABCD4-224ENST00000556119 MRPS5P82675 430 aaKnown RBP16.6■□□□□ 0.25
ABCD4-224ENST00000556119 TRIM60Q495X7 471 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms