RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 AHDC1Q5TGY3 1603 aaPredicted RBP19.06■□□□□ 0.64
PCNX1-209ENST00000554879 BTDP43251 543 aa19.05■□□□□ 0.64
PCNX1-209ENST00000554879 TNKSO95271 1327 aa19.05■□□□□ 0.64
PCNX1-209ENST00000554879 IRX5P78411 483 aaPredicted RBP19.05■□□□□ 0.64
PCNX1-209ENST00000554879 TFAP4Q01664 338 aa19.05■□□□□ 0.64
PCNX1-209ENST00000554879 TPD52L1Q16890 204 aaPredicted RBP19.05■□□□□ 0.64
PCNX1-209ENST00000554879 VGLL2Q8N8G2 317 aa19.05■□□□□ 0.64
PCNX1-209ENST00000554879 NSUN7Q8NE18 718 aaKnown RBP19.05■□□□□ 0.64
PCNX1-209ENST00000554879 GSG1L2A8MUP6 293 aa19.05■□□□□ 0.64
PCNX1-209ENST00000554879 SEMA3EO15041 775 aa19.05■□□□□ 0.64
PCNX1-209ENST00000554879 USP17L8P0C7I0 530 aa19.05■□□□□ 0.64
PCNX1-209ENST00000554879 C5P01031 1676 aa19.05■□□□□ 0.64
PCNX1-209ENST00000554879 CCDC96Q2M329 555 aa19.05■□□□□ 0.64
PCNX1-209ENST00000554879 C16orf45Q96MC5 204 aaPredicted RBP19.05■□□□□ 0.64
PCNX1-209ENST00000554879 GJB4Q9NTQ9 266 aa19.05■□□□□ 0.64
PCNX1-209ENST00000554879 PLCG2P16885 1265 aa19.04■□□□□ 0.64
PCNX1-209ENST00000554879 AMIGO3Q86WK7 504 aa19.04■□□□□ 0.64
PCNX1-209ENST00000554879 XIRP1Q702N8 1843 aaKnown RBP19.04■□□□□ 0.64
PCNX1-209ENST00000554879 SOGA3Q5TF21 947 aa19.04■□□□□ 0.64
PCNX1-209ENST00000554879 CYB5R4Q7L1T6 521 aa19.04■□□□□ 0.64
PCNX1-209ENST00000554879 C10orf67Q8IYJ2 551 aa19.04■□□□□ 0.64
PCNX1-209ENST00000554879 PPP1R9BQ96SB3 815 aa19.04■□□□□ 0.64
PCNX1-209ENST00000554879 TMEM63CQ9P1W3 806 aa19.04■□□□□ 0.64
PCNX1-209ENST00000554879 NEDD4P46934 1319 aa19.04■□□□□ 0.64
PCNX1-209ENST00000554879 APOA5Q6Q788 366 aa19.04■□□□□ 0.64
PCNX1-209ENST00000554879 GPT2Q8TD30 523 aa19.04■□□□□ 0.64
PCNX1-209ENST00000554879 HLA-DOAP06340 250 aa19.03■□□□□ 0.64
PCNX1-209ENST00000554879 CYP2D6P10635 497 aa19.03■□□□□ 0.64
PCNX1-209ENST00000554879 KIF5BP33176 963 aa19.03■□□□□ 0.64
PCNX1-209ENST00000554879 ZNF654Q8IZM8 581 aa19.03■□□□□ 0.64
PCNX1-209ENST00000554879 CD209Q9NNX6 404 aa19.03■□□□□ 0.64
PCNX1-209ENST00000554879 V9GY48 417 aaPredicted RBP19.03■□□□□ 0.64
PCNX1-209ENST00000554879 AFDNP55196 1824 aaKnown RBP19.03■□□□□ 0.64
PCNX1-209ENST00000554879 SLC10A5Q5PT55 438 aa19.03■□□□□ 0.64
PCNX1-209ENST00000554879 COL23A1Q86Y22 540 aaPredicted RBP19.03■□□□□ 0.64
PCNX1-209ENST00000554879 KCNJ14Q9UNX9 436 aa19.03■□□□□ 0.64
PCNX1-209ENST00000554879 TPM4P67936 248 aa19.03■□□□□ 0.64
PCNX1-209ENST00000554879 OLFM4Q6UX06 510 aa19.03■□□□□ 0.64
PCNX1-209ENST00000554879 NHSL1Q5SYE7 1610 aa19.02■□□□□ 0.64
PCNX1-209ENST00000554879 AIFM3Q96NN9 605 aa19.02■□□□□ 0.64
PCNX1-209ENST00000554879 PDILTQ8N807 584 aa19.02■□□□□ 0.64
PCNX1-209ENST00000554879 TBC1D22AQ8WUA7 517 aa19.02■□□□□ 0.64
PCNX1-209ENST00000554879 DYNLL2Q96FJ2 89 aa19.02■□□□□ 0.64
PCNX1-209ENST00000554879 PPIP5K2O43314 1243 aa19.02■□□□□ 0.63
PCNX1-209ENST00000554879 ZNF500O60304 480 aaPredicted RBP19.02■□□□□ 0.63
PCNX1-209ENST00000554879 TSGA10IPQ3SY00 556 aa19.02■□□□□ 0.63
PCNX1-209ENST00000554879 RBM26Q5T8P6 1007 aaKnown RBP19.02■□□□□ 0.63
PCNX1-209ENST00000554879 CHRNA5P30532 468 aa19.01■□□□□ 0.63
PCNX1-209ENST00000554879 GPS2Q13227 327 aa19.01■□□□□ 0.63
PCNX1-209ENST00000554879 ZNF512BQ96KM6 892 aaPredicted RBP19.01■□□□□ 0.63
PCNX1-209ENST00000554879 LTBP4Q8N2S1 1624 aa19.01■□□□□ 0.63
PCNX1-209ENST00000554879 BIN1O00499 593 aa19.01■□□□□ 0.63
PCNX1-209ENST00000554879 NPR1P16066 1061 aa19.01■□□□□ 0.63
PCNX1-209ENST00000554879 EZH2Q15910 746 aaKnown RBP19.01■□□□□ 0.63
PCNX1-209ENST00000554879 ISM2Q6H9L7 571 aa19.01■□□□□ 0.63
PCNX1-209ENST00000554879 DEFB132Q7Z7B7 95 aa19.01■□□□□ 0.63
PCNX1-209ENST00000554879 FTOQ9C0B1 505 aaKnown RBP eCLIP19.01■□□□□ 0.63
PCNX1-209ENST00000554879 VEZTQ9HBM0 779 aa19.01■□□□□ 0.63
PCNX1-209ENST00000554879 RIC1Q4ADV7 1423 aa19.01■□□□□ 0.63
PCNX1-209ENST00000554879 KRT40Q6A162 431 aa19.01■□□□□ 0.63
PCNX1-209ENST00000554879 LEO1Q8WVC0 666 aaPredicted RBP19.01■□□□□ 0.63
PCNX1-209ENST00000554879 SEC63Q9UGP8 760 aaKnown RBP19.01■□□□□ 0.63
PCNX1-209ENST00000554879 RTL9Q8NET4 1388 aa19■□□□□ 0.63
PCNX1-209ENST00000554879 LRSAM1Q6UWE0 723 aa19■□□□□ 0.63
PCNX1-209ENST00000554879 CCAR2Q8N163 923 aaKnown RBP19■□□□□ 0.63
PCNX1-209ENST00000554879 LARGE2Q8N3Y3 721 aa19■□□□□ 0.63
PCNX1-209ENST00000554879 OGFOD1Q8N543 542 aa19■□□□□ 0.63
PCNX1-209ENST00000554879 TRIM5Q9C035 493 aa19■□□□□ 0.63
PCNX1-209ENST00000554879 TSPYL1Q9H0U9 437 aa19■□□□□ 0.63
PCNX1-209ENST00000554879 USP40Q9NVE5 1235 aa19■□□□□ 0.63
PCNX1-209ENST00000554879 TTC6Q86TZ1 520 aa19■□□□□ 0.63
PCNX1-209ENST00000554879 MB21D2Q8IYB1 491 aaPredicted RBP19■□□□□ 0.63
PCNX1-209ENST00000554879 EPB41L4AQ9HCS5 686 aaPredicted RBP19■□□□□ 0.63
PCNX1-209ENST00000554879 ATF5Q9Y2D1 282 aaPredicted RBP19■□□□□ 0.63
PCNX1-209ENST00000554879 HS1BP3Q53T59 392 aa19■□□□□ 0.63
PCNX1-209ENST00000554879 ZSCAN10Q96SZ4 725 aaPredicted RBP19■□□□□ 0.63
PCNX1-209ENST00000554879 ARPP21Q9UBL0 812 aaPredicted RBP19■□□□□ 0.63
PCNX1-209ENST00000554879 RSPH14Q9UHP6 348 aa19■□□□□ 0.63
PCNX1-209ENST00000554879 HEATR3Q7Z4Q2 680 aa18.99■□□□□ 0.63
PCNX1-209ENST00000554879 SH3RF3Q8TEJ3 882 aaPredicted RBP18.99■□□□□ 0.63
PCNX1-209ENST00000554879 SH2B2O14492 632 aaPredicted RBP18.99■□□□□ 0.63
PCNX1-209ENST00000554879 OGFRQ9NZT2 677 aa18.99■□□□□ 0.63
PCNX1-209ENST00000554879 POLD1P28340 1107 aa18.99■□□□□ 0.63
PCNX1-209ENST00000554879 FBXO33Q7Z6M2 555 aa18.99■□□□□ 0.63
PCNX1-209ENST00000554879 NSUN4Q96CB9 384 aaKnown RBP18.99■□□□□ 0.63
PCNX1-209ENST00000554879 BRIP1Q9BX63 1249 aa18.99■□□□□ 0.63
PCNX1-209ENST00000554879 ATP8A2Q9NTI2 1148 aa18.99■□□□□ 0.63
PCNX1-209ENST00000554879 HOOK1Q9UJC3 728 aaKnown RBP18.99■□□□□ 0.63
PCNX1-209ENST00000554879 RIOK3O14730 519 aaKnown RBP18.99■□□□□ 0.63
PCNX1-209ENST00000554879 SPTLC2O15270 562 aa18.99■□□□□ 0.63
PCNX1-209ENST00000554879 RPAP1Q9BWH6 1393 aaPredicted RBP18.98■□□□□ 0.63
PCNX1-209ENST00000554879 FANCBQ8NB91 859 aa18.98■□□□□ 0.63
PCNX1-209ENST00000554879 MASTLQ96GX5 879 aa18.98■□□□□ 0.63
PCNX1-209ENST00000554879 USP28Q96RU2 1077 aa18.98■□□□□ 0.63
PCNX1-209ENST00000554879 DDX19AQ9NUU7 478 aaKnown RBP18.98■□□□□ 0.63
PCNX1-209ENST00000554879 PKD1L3Q7Z443 1732 aa18.98■□□□□ 0.63
PCNX1-209ENST00000554879 C21orf2O43822 256 aa18.98■□□□□ 0.63
PCNX1-209ENST00000554879 EXOSC10Q01780 885 aaKnown RBP18.98■□□□□ 0.63
PCNX1-209ENST00000554879 KRT222Q8N1A0 295 aa18.98■□□□□ 0.63
PCNX1-209ENST00000554879 DEF6Q9H4E7 631 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 236.7 ms