RNA–Protein interactions for RNA: ENST00000554426.5

CKB-208, Transcript of creatine kinase B, human

TSL 5

Gene CKB, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKB-208	ENST00000554426	CDCA7L	Q96GN5	454 aa		32.59	■■■□□ 2.81
CKB-208	ENST00000554426	GJD2	Q9UKL4	321 aa		32.59	■■■□□ 2.81
CKB-208	ENST00000554426	PNMA3	Q9UL41	463 aa		32.59	■■■□□ 2.81
CKB-208	ENST00000554426	DLL1	O00548	723 aa		32.58	■■■□□ 2.81
CKB-208	ENST00000554426	NPM3	O75607	178 aa	Known RBP	32.58	■■■□□ 2.81
CKB-208	ENST00000554426	MNX1	P50219	401 aa	Predicted RBP	32.58	■■■□□ 2.81
CKB-208	ENST00000554426	XAGE2	Q96GT9	111 aa		32.58	■■■□□ 2.81
CKB-208	ENST00000554426	MEIS3	Q99687	375 aa		32.58	■■■□□ 2.81
CKB-208	ENST00000554426	GDF15	Q99988	308 aa		32.58	■■■□□ 2.81
CKB-208	ENST00000554426	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	32.58	■■■□□ 2.81	5e-7	■■■□□ 16
CKB-208	ENST00000554426		A0A1B0GUL7	405 aa		32.57	■■■□□ 2.8
CKB-208	ENST00000554426	ZNF280C	Q8ND82	737 aa		32.57	■■■□□ 2.8
CKB-208	ENST00000554426	OSBPL5	Q9H0X9	879 aa	Predicted RBP	32.57	■■■□□ 2.8
CKB-208	ENST00000554426	NOB1	Q9ULX3	412 aa	Known RBP	32.57	■■■□□ 2.8
CKB-208	ENST00000554426	HMGCR	P04035	888 aa		32.56	■■■□□ 2.8
CKB-208	ENST00000554426	HMGCS2	P54868	508 aa		32.56	■■■□□ 2.8
CKB-208	ENST00000554426	TFCP2	Q12800	502 aa		32.56	■■■□□ 2.8
CKB-208	ENST00000554426	PI16	Q6UXB8	463 aa		32.56	■■■□□ 2.8
CKB-208	ENST00000554426	ERICH6	Q7L0X2	663 aa		32.56	■■■□□ 2.8
CKB-208	ENST00000554426	C7orf61	Q8IZ16	206 aa		32.56	■■■□□ 2.8
CKB-208	ENST00000554426	GCLC	P48506	637 aa	Predicted RBP	32.55	■■■□□ 2.8
CKB-208	ENST00000554426	ASCC2	Q9H1I8	757 aa	Predicted RBP	32.55	■■■□□ 2.8
CKB-208	ENST00000554426	HMG20B	Q9P0W2	317 aa		32.55	■■■□□ 2.8
CKB-208	ENST00000554426	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	32.55	■■■□□ 2.8
CKB-208	ENST00000554426	TBC1D9	Q6ZT07	1266 aa		32.54	■■■□□ 2.8
CKB-208	ENST00000554426	ANKLE1	Q8NAG6	615 aa		32.54	■■■□□ 2.8
CKB-208	ENST00000554426	LOC285556	D6RIA3	1793 aa		32.54	■■■□□ 2.8
CKB-208	ENST00000554426	BMP8B	P34820	402 aa		32.53	■■■□□ 2.8
CKB-208	ENST00000554426	NSUN4	Q96CB9	384 aa	Known RBP	32.53	■■■□□ 2.8
CKB-208	ENST00000554426	CAP2	P40123	477 aa		32.52	■■■□□ 2.8
CKB-208	ENST00000554426	MVP	Q14764	893 aa	Known RBP	32.52	■■■□□ 2.8
CKB-208	ENST00000554426	COL2A1	P02458	1487 aa	Predicted RBP	32.52	■■■□□ 2.8
CKB-208	ENST00000554426	RPTOR	Q8N122	1335 aa		32.51	■■■□□ 2.8
CKB-208	ENST00000554426	SH3D19	Q5HYK7	790 aa		32.51	■■■□□ 2.79
CKB-208	ENST00000554426	PEX10	O60683	326 aa		32.5	■■■□□ 2.79
CKB-208	ENST00000554426	TRMT2A	Q8IZ69	625 aa	Known RBP	32.5	■■■□□ 2.79
CKB-208	ENST00000554426	TRIB2	Q92519	343 aa		32.5	■■■□□ 2.79
CKB-208	ENST00000554426	HMX1	Q9NP08	348 aa	Predicted RBP	32.5	■■■□□ 2.79
CKB-208	ENST00000554426	AKAP2	Q9Y2D5	859 aa		32.5	■■■□□ 2.79
CKB-208	ENST00000554426	USP17L5	A8MUK1	530 aa		32.49	■■■□□ 2.79
CKB-208	ENST00000554426	API5	Q9BZZ5	524 aa	Known RBP	32.49	■■■□□ 2.79
CKB-208	ENST00000554426	NBPF3	Q9H094	633 aa		32.49	■■■□□ 2.79
CKB-208	ENST00000554426	MORF4L1	Q9UBU8	362 aa		32.49	■■■□□ 2.79
CKB-208	ENST00000554426	HDAC5	Q9UQL6	1122 aa		32.49	■■■□□ 2.79
CKB-208	ENST00000554426	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.48	■■■□□ 2.79
CKB-208	ENST00000554426	MAP4K4	O95819	1239 aa	Predicted RBP	32.48	■■■□□ 2.79
CKB-208	ENST00000554426	SYN1	P17600	705 aa		32.48	■■■□□ 2.79
CKB-208	ENST00000554426	JAG1	P78504	1218 aa		32.48	■■■□□ 2.79
CKB-208	ENST00000554426	PABPC4	Q13310	644 aa	Known RBP eCLIP	32.48	■■■□□ 2.79
CKB-208	ENST00000554426	SPATA5	Q8NB90	893 aa		32.48	■■■□□ 2.79
CKB-208	ENST00000554426	TBC1D2	Q9BYX2	928 aa		32.48	■■■□□ 2.79
CKB-208	ENST00000554426	SRGAP3	O43295	1099 aa		32.47	■■■□□ 2.79
CKB-208	ENST00000554426	MAP3K21	Q5TCX8	1036 aa		32.47	■■■□□ 2.79
CKB-208	ENST00000554426	NEUROD6	Q96NK8	337 aa		32.47	■■■□□ 2.79
CKB-208	ENST00000554426	OGDHL	Q9ULD0	1010 aa		32.47	■■■□□ 2.79
CKB-208	ENST00000554426	PLXNB2	O15031	1838 aa		32.47	■■■□□ 2.79
CKB-208	ENST00000554426	LDHC	P07864	332 aa		32.46	■■■□□ 2.79
CKB-208	ENST00000554426	GSTO1	P78417	241 aa		32.46	■■■□□ 2.79
CKB-208	ENST00000554426	C11orf49	Q9H6J7	331 aa		32.46	■■■□□ 2.79
CKB-208	ENST00000554426	TXNRD2	Q9NNW7	524 aa		32.46	■■■□□ 2.79
CKB-208	ENST00000554426	MAGEA10	P43363	369 aa	Predicted RBP	32.45	■■■□□ 2.79
CKB-208	ENST00000554426	MTX1	Q13505	466 aa		32.45	■■■□□ 2.79
CKB-208	ENST00000554426	TEX11	Q8IYF3	940 aa		32.45	■■■□□ 2.79
CKB-208	ENST00000554426	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	32.45	■■■□□ 2.79
CKB-208	ENST00000554426	RAI14	Q9P0K7	980 aa		32.45	■■■□□ 2.79
CKB-208	ENST00000554426	CYP2B6	P20813	491 aa		32.44	■■■□□ 2.78
CKB-208	ENST00000554426	MTMR2	Q13614	643 aa		32.44	■■■□□ 2.78
CKB-208	ENST00000554426	SHROOM1	Q2M3G4	852 aa	Predicted RBP	32.44	■■■□□ 2.78
CKB-208	ENST00000554426		Q7L0L9	218 aa		32.44	■■■□□ 2.78
CKB-208	ENST00000554426	P2RX7	Q99572	595 aa	Known RBP	32.44	■■■□□ 2.78
CKB-208	ENST00000554426	WDR18	Q9BV38	432 aa		32.44	■■■□□ 2.78
CKB-208	ENST00000554426	HERC5	Q9UII4	1024 aa	Known RBP	32.44	■■■□□ 2.78
CKB-208	ENST00000554426	DDX60L	Q5H9U9	1706 aa	Known RBP	32.43	■■■□□ 2.78
CKB-208	ENST00000554426	ATAD5	Q96QE3	1844 aa		32.43	■■■□□ 2.78
CKB-208	ENST00000554426	ARID4A	P29374	1257 aa	Predicted RBP	32.43	■■■□□ 2.78
CKB-208	ENST00000554426	GPR153	Q6NV75	609 aa		32.43	■■■□□ 2.78
CKB-208	ENST00000554426	AS3MT	Q9HBK9	375 aa		32.43	■■■□□ 2.78
CKB-208	ENST00000554426	PFAS	O15067	1338 aa		32.43	■■■□□ 2.78
CKB-208	ENST00000554426	PRKAR2A	P13861	404 aa	Known RBP	32.42	■■■□□ 2.78
CKB-208	ENST00000554426	MCAM	P43121	646 aa		32.42	■■■□□ 2.78
CKB-208	ENST00000554426	DEFB123	Q8N688	67 aa		32.42	■■■□□ 2.78
CKB-208	ENST00000554426	DNAJC18	Q9H819	358 aa		32.42	■■■□□ 2.78
CKB-208	ENST00000554426	HOXA7	P31268	230 aa	Predicted RBP	32.41	■■■□□ 2.78
CKB-208	ENST00000554426	BACE1	P56817	501 aa		32.41	■■■□□ 2.78
CKB-208	ENST00000554426	IRX3	P78415	501 aa	Predicted RBP	32.41	■■■□□ 2.78
CKB-208	ENST00000554426	CUL9	Q8IWT3	2517 aa		32.4	■■■□□ 2.78
CKB-208	ENST00000554426	SIPA1L1	O43166	1804 aa		32.4	■■■□□ 2.78
CKB-208	ENST00000554426	LRIT3	Q3SXY7	679 aa		32.4	■■■□□ 2.78
CKB-208	ENST00000554426	PI4KB	Q9UBF8	816 aa		32.4	■■■□□ 2.78
CKB-208	ENST00000554426	CT47B1	P0C2W7	299 aa	Predicted RBP	32.39	■■■□□ 2.78
CKB-208	ENST00000554426	HERVK_113	P62684	666 aa		32.39	■■■□□ 2.78
CKB-208	ENST00000554426	GORAB	Q5T7V8	394 aa		32.39	■■■□□ 2.78
CKB-208	ENST00000554426	POTEE	Q6S8J3	1075 aa		32.39	■■■□□ 2.78
CKB-208	ENST00000554426	RBPJL	Q9UBG7	517 aa		32.39	■■■□□ 2.78
CKB-208	ENST00000554426	GNAI3	P08754	354 aa		32.38	■■■□□ 2.77
CKB-208	ENST00000554426	XRCC5	P13010	732 aa	Known RBP	32.38	■■■□□ 2.77
CKB-208	ENST00000554426	TDH	Q8IZJ6	230 aa		32.38	■■■□□ 2.77
CKB-208	ENST00000554426	GPRC5A	Q8NFJ5	357 aa		32.38	■■■□□ 2.77
CKB-208	ENST00000554426	NUDT12	Q9BQG2	462 aa		32.38	■■■□□ 2.77
CKB-208	ENST00000554426	LRP2BP	Q9P2M1	347 aa		32.38	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms