RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 SMCHD1A6NHR9 2005 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 USP17L12C9JPN9 530 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 USP17L21D6R901 530 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 POTEIP0CG38 1075 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 POTEJP0CG39 1038 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 RASA1P20936 1047 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 SHROOM1Q2M3G4 852 aaPredicted RBP8.06□□□□□ -1.12
LINC00517-202ENST00000554257 TBC1D10BQ4KMP7 808 aaPredicted RBP8.06□□□□□ -1.12
LINC00517-202ENST00000554257 PELP1Q8IZL8 1130 aaKnown RBP8.06□□□□□ -1.12
LINC00517-202ENST00000554257 IL17RBQ9NRM6 502 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 GJA3Q9Y6H8 435 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 G3V3G9 751 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 DLGAP5Q15398 846 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 DCAF8Q5TAQ9 597 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 RCSD1Q6JBY9 416 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 SIAH1Q8IUQ4 282 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 DYNLL2Q96FJ2 89 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 HDAC9Q9UKV0 1011 aa8.06□□□□□ -1.12
LINC00517-202ENST00000554257 PLXNB2O15031 1838 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 AKNAD1Q5T1N1 836 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 IGDCC4Q8TDY8 1250 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 ANKS1AQ92625 1134 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 TMEM39BQ9GZU3 492 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 PCP11498 1178 aaKnown RBP8.05□□□□□ -1.12
LINC00517-202ENST00000554257 CPA1P15085 419 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 RPS6KB1P23443 525 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 RUFY3Q7L099 469 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 SENP2Q9HC62 589 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 TCP11L1Q9NUJ3 509 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 CLRN2A0PK11 232 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 MGAMO43451 1857 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 EPHX2P34913 555 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 DLK2Q6UY11 383 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 SLC44A5Q8NCS7 719 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 ZC3H15Q8WU90 426 aaKnown RBP8.05□□□□□ -1.12
LINC00517-202ENST00000554257 SNX21Q969T3 373 aa8.05□□□□□ -1.12
LINC00517-202ENST00000554257 HAND2P61296 217 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 ANGEL2Q5VTE6 544 aaKnown RBP8.04□□□□□ -1.12
LINC00517-202ENST00000554257 SAP30BPQ9UHR5 308 aaKnown RBP8.04□□□□□ -1.12
LINC00517-202ENST00000554257 SCAF8Q9UPN6 1271 aaKnown RBP8.04□□□□□ -1.12
LINC00517-202ENST00000554257 PPP2R3BQ9Y5P8 575 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 PASKQ96RG2 1323 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 EIF5BO60841 1220 aaKnown RBP8.04□□□□□ -1.12
LINC00517-202ENST00000554257 DDIT3P35638 169 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 CDK8P49336 464 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 MTA3Q9BTC8 594 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 NAPBQ9H115 298 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 DHX36Q9H2U1 1008 aaKnown RBP8.04□□□□□ -1.12
LINC00517-202ENST00000554257 ZSWIM5Q9P217 1185 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 CTNNA3Q9UI47 895 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 RBM19Q9Y4C8 960 aaKnown RBP8.04□□□□□ -1.12
LINC00517-202ENST00000554257 NT5C2P49902 561 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 MAP3K11Q16584 847 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 LY9Q9HBG7 655 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 MCM9Q9NXL9 1143 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 GGA3Q9NZ52 723 aa8.04□□□□□ -1.12
LINC00517-202ENST00000554257 ZNF213O14771 459 aa8.03□□□□□ -1.12
LINC00517-202ENST00000554257 KIF3CO14782 793 aa8.03□□□□□ -1.12
LINC00517-202ENST00000554257 LARGE1O95461 756 aa8.03□□□□□ -1.12
LINC00517-202ENST00000554257 IMMTQ16891 758 aaKnown RBP8.03□□□□□ -1.12
LINC00517-202ENST00000554257 OGFOD1Q8N543 542 aa8.03□□□□□ -1.12
LINC00517-202ENST00000554257 GPHNQ9NQX3 736 aaPredicted RBP8.03□□□□□ -1.12
LINC00517-202ENST00000554257 HPS5Q9UPZ3 1129 aa8.03□□□□□ -1.12
LINC00517-202ENST00000554257 TCP10L2B9ZVM9 353 aa8.03□□□□□ -1.12
LINC00517-202ENST00000554257 SH2B2O14492 632 aaPredicted RBP8.03□□□□□ -1.12
LINC00517-202ENST00000554257 APOBEC3FQ8IUX4 373 aaKnown RBP8.03□□□□□ -1.12
LINC00517-202ENST00000554257 H7C1D1 291 aa8.02□□□□□ -1.12
LINC00517-202ENST00000554257 ITGBL1O95965 494 aaPredicted RBP8.02□□□□□ -1.12
LINC00517-202ENST00000554257 USP5P45974 858 aa8.02□□□□□ -1.12
LINC00517-202ENST00000554257 PICALMQ13492 652 aa8.02□□□□□ -1.12
LINC00517-202ENST00000554257 RASA3Q14644 834 aa8.02□□□□□ -1.12
LINC00517-202ENST00000554257 IL27Q8NEV9 243 aa8.02□□□□□ -1.12
LINC00517-202ENST00000554257 DEFB129Q9H1M3 183 aa8.02□□□□□ -1.12
LINC00517-202ENST00000554257 NMRK2Q9NPI5 230 aa8.02□□□□□ -1.12
LINC00517-202ENST00000554257 FAM217BQ9NTX9 383 aaPredicted RBP8.02□□□□□ -1.12
LINC00517-202ENST00000554257 ADM5C9JUS6 153 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 TDO2P48775 406 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 TCP10Q12799 353 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 RABEP1Q15276 862 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 NOL9Q5SY16 702 aaKnown RBP8.02□□□□□ -1.13
LINC00517-202ENST00000554257 KIAA1211Q6ZU35 1233 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 SGMS1Q86VZ5 419 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 NEK1Q96PY6 1258 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 NACAP1Q9BZK3 213 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 BRPF3Q9ULD4 1205 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 B4E1Z4 1266 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 AKR1B1P15121 316 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 SLC35G1Q2M3R5 365 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 NBPF12Q5TAG4 269 aaPredicted RBP8.02□□□□□ -1.13
LINC00517-202ENST00000554257 JAKMIP1Q96N16 626 aaKnown RBP8.02□□□□□ -1.13
LINC00517-202ENST00000554257 PI4KBQ9UBF8 816 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 SWAP70Q9UH65 585 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 HERC5Q9UII4 1024 aaKnown RBP8.02□□□□□ -1.13
LINC00517-202ENST00000554257 SERPINB13Q9UIV8 391 aa8.02□□□□□ -1.13
LINC00517-202ENST00000554257 TCHHQ07283 1943 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 NMT2O60551 498 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 CASTP20810 708 aaKnown RBP8.01□□□□□ -1.13
LINC00517-202ENST00000554257 AK2P54819 239 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 KRT32Q14532 448 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 DHX32Q7L7V1 743 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms