RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 HDLBPQ00341 1268 aaKnown RBP10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 C6orf183Q5T699 404 aa10.03□□□□□ -0.8
GTF2A1-203ENST00000553612 A6NJR5 290 aa10.02□□□□□ -0.8
GTF2A1-203ENST00000553612 SPDYE16A6NNV3 312 aaPredicted RBP10.02□□□□□ -0.8
GTF2A1-203ENST00000553612 DKC1O60832 514 aaKnown RBP eCLIP10.02□□□□□ -0.87e-71■■■■■ 267.5
GTF2A1-203ENST00000553612 NEK2P51955 445 aa10.02□□□□□ -0.8
GTF2A1-203ENST00000553612 STMN2Q93045 179 aa10.02□□□□□ -0.8
GTF2A1-203ENST00000553612 TANGO6Q9C0B7 1094 aa10.02□□□□□ -0.8
GTF2A1-203ENST00000553612 DDX19AQ9NUU7 478 aaKnown RBP10.02□□□□□ -0.8
GTF2A1-203ENST00000553612 INAQ16352 499 aa10.02□□□□□ -0.8
GTF2A1-203ENST00000553612 CCDC129Q6ZRS4 1044 aa10.02□□□□□ -0.8
GTF2A1-203ENST00000553612 KAT2BQ92831 832 aa10.02□□□□□ -0.8
GTF2A1-203ENST00000553612 OPTNQ96CV9 577 aa10.02□□□□□ -0.8
GTF2A1-203ENST00000553612 IFT74Q96LB3 600 aa10.02□□□□□ -0.8
GTF2A1-203ENST00000553612 FSD1Q9BTV5 496 aa10.02□□□□□ -0.8
GTF2A1-203ENST00000553612 ARHGEF10LQ9HCE6 1279 aa10.02□□□□□ -0.8
GTF2A1-203ENST00000553612 DDX21Q9NR30 783 aaKnown RBP eCLIP10.02□□□□□ -0.85e-8■□□□□ 8.1
GTF2A1-203ENST00000553612 TTLL13PA6NNM8 815 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 MEFVO15553 781 aaPredicted RBP10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 RTN3O95197 1032 aaPredicted RBP10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 CWF19L1Q69YN2 538 aaKnown RBP10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 CDK5RAP3Q96JB5 506 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 EPAS1Q99814 870 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 HOMER3Q9NSC5 361 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 EIF4BP23588 611 aaKnown RBP10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 FLT3P36888 993 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 C2CD2Q9Y426 696 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 TRIM43BA6NCK2 446 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 PDCP20941 246 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 CYB5D1Q6P9G0 228 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 RABGGTAQ92696 567 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 LRRC2Q9BYS8 371 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 PSD3Q9NYI0 1048 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 ZFATQ9P243 1243 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 INTUQ9ULD6 942 aa10.02□□□□□ -0.81
GTF2A1-203ENST00000553612 ELOA2Q8IYF1 753 aaPredicted RBP10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 C8orf76Q96K31 380 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 C6orf203Q9P0P8 240 aaPredicted RBP10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 DKK3Q9UBP4 350 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 ANP32DO95626 131 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 TUBB4AP04350 444 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 TRIM27P14373 513 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 NCAPG2Q86XI2 1143 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 MSANTD4Q8NCY6 345 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 SSH1Q8WYL5 1049 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 RPGRIP1Q96KN7 1286 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 CHPF2Q9P2E5 772 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 GSPT2Q8IYD1 628 aaKnown RBP10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 CNTROBQ8N137 903 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 HPS3Q969F9 1004 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 LRRIQ3A6PVS8 624 aaPredicted RBP10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 RAPGEF3O95398 923 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 TBC1D8O95759 1140 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 THOC7Q6I9Y2 204 aaKnown RBP10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 CUL5Q93034 780 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 NSRP1Q9H0G5 558 aaKnown RBP10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 ACTR5Q9H9F9 607 aaPredicted RBP10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 U3KPZ7 1027 aaPredicted RBP10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 DHX58Q96C10 678 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 VMP1Q96GC9 406 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 STIM2Q9P246 746 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 RBMX2Q9Y388 322 aaKnown RBP10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 IKBKGQ9Y6K9 419 aa10.01□□□□□ -0.81
GTF2A1-203ENST00000553612 GGCXP38435 758 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 MTHFSP49914 203 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 ABHD8Q96I13 439 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 LUC7LQ9NQ29 371 aaKnown RBP10□□□□□ -0.81
GTF2A1-203ENST00000553612 HNRNPRO43390 633 aaKnown RBP10□□□□□ -0.81
GTF2A1-203ENST00000553612 AHCYL1O43865 530 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 APOEP02649 317 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 ZNF24P17028 368 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 ATP4AP20648 1035 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 CCDC174Q6PII3 467 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 KIAA2013Q8IYS2 634 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 RBM41Q96IZ5 413 aaKnown RBP10□□□□□ -0.81
GTF2A1-203ENST00000553612 ATP6V0A4Q9HBG4 840 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 GPBP1L1Q9HC44 474 aaPredicted RBP10□□□□□ -0.81
GTF2A1-203ENST00000553612 LINC00854A0A1B0GVQ3 168 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 STAMBPO95630 424 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 F13A1P00488 732 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 SERPINB3P29508 390 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 DHRS1Q96LJ7 313 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 MOV10L1Q9BXT6 1211 aaKnown RBP10□□□□□ -0.81
GTF2A1-203ENST00000553612 SEPT11Q9NVA2 429 aaKnown RBP10□□□□□ -0.81
GTF2A1-203ENST00000553612 PPP1R9AQ9ULJ8 1098 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 ROR2Q01974 943 aaKnown RBP10□□□□□ -0.81
GTF2A1-203ENST00000553612 CLUL1Q15846 466 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 MAGEC2Q9UBF1 373 aaPredicted RBP10□□□□□ -0.81
GTF2A1-203ENST00000553612 ANKRD30AQ9BXX3 1397 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 CCDC151A5D8V7 595 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 CWC25Q9NXE8 425 aaPredicted RBP10□□□□□ -0.81
GTF2A1-203ENST00000553612 RTEL1Q9NZ71 1219 aa10□□□□□ -0.81
GTF2A1-203ENST00000553612 SUCLA2Q9P2R7 463 aaPredicted RBP10□□□□□ -0.81
GTF2A1-203ENST00000553612 NUTM2FA1L443 756 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 FLOT1O75955 427 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 MBD4O95243 580 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 DDX5P17844 614 aaKnown RBP9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 PTF1AQ7RTS3 328 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 WAPLQ7Z5K2 1190 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 NOD2Q9HC29 1040 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 368.1 ms