RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 GSG1L2A8MUP6 293 aa19.45■□□□□ 0.7
CHMP1A-209ENST00000550872 TBC1D12O60347 775 aa19.45■□□□□ 0.7
CHMP1A-209ENST00000550872 ECE1P42892 770 aa19.45■□□□□ 0.7
CHMP1A-209ENST00000550872 MAP3K10Q02779 954 aa19.45■□□□□ 0.7
CHMP1A-209ENST00000550872 CWC27Q6UX04 472 aaKnown RBP19.45■□□□□ 0.7
CHMP1A-209ENST00000550872 CRACR2BQ8N4Y2 399 aaPredicted RBP19.45■□□□□ 0.7
CHMP1A-209ENST00000550872 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.45■□□□□ 0.7
CHMP1A-209ENST00000550872 CLMNQ96JQ2 1002 aa19.45■□□□□ 0.7
CHMP1A-209ENST00000550872 CAPNS2Q96L46 248 aa19.45■□□□□ 0.7
CHMP1A-209ENST00000550872 ZNF112Q9UJU3 913 aa19.45■□□□□ 0.7
CHMP1A-209ENST00000550872 FAM196BA6NMK8 535 aa19.44■□□□□ 0.7
CHMP1A-209ENST00000550872 PATL2C9JE40 543 aaKnown RBP19.44■□□□□ 0.7
CHMP1A-209ENST00000550872 VEGFBP49765 207 aa19.44■□□□□ 0.7
CHMP1A-209ENST00000550872 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.44■□□□□ 0.7
CHMP1A-209ENST00000550872 AMOTL1Q8IY63 956 aa19.44■□□□□ 0.7
CHMP1A-209ENST00000550872 CCDC102AQ96A19 550 aa19.44■□□□□ 0.7
CHMP1A-209ENST00000550872 HERC5Q9UII4 1024 aaKnown RBP19.44■□□□□ 0.7
CHMP1A-209ENST00000550872 CSADQ9Y600 493 aa19.44■□□□□ 0.7
CHMP1A-209ENST00000550872 USP17L12C9JPN9 530 aa19.43■□□□□ 0.7
CHMP1A-209ENST00000550872 USP17L21D6R901 530 aa19.43■□□□□ 0.7
CHMP1A-209ENST00000550872 CYP2D6P10635 497 aa19.43■□□□□ 0.7
CHMP1A-209ENST00000550872 INPP5BP32019 993 aa19.43■□□□□ 0.7
CHMP1A-209ENST00000550872 PLCD1P51178 756 aa19.43■□□□□ 0.7
CHMP1A-209ENST00000550872 BMP2KLQ5H9B9 411 aa19.43■□□□□ 0.7
CHMP1A-209ENST00000550872 GIMAP6Q6P9H5 292 aa19.43■□□□□ 0.7
CHMP1A-209ENST00000550872 ZKSCAN4Q969J2 545 aaPredicted RBP19.43■□□□□ 0.7
CHMP1A-209ENST00000550872 NACAP1Q9BZK3 213 aa19.43■□□□□ 0.7
CHMP1A-209ENST00000550872 WDR33Q9C0J8 1336 aaKnown RBP19.43■□□□□ 0.7
CHMP1A-209ENST00000550872 NAV1Q8NEY1 1877 aa19.42■□□□□ 0.7
CHMP1A-209ENST00000550872 PHF20L1A8MW92 1017 aa19.42■□□□□ 0.7
CHMP1A-209ENST00000550872 TDO2P48775 406 aa19.42■□□□□ 0.7
CHMP1A-209ENST00000550872 MFAP1P55081 439 aaKnown RBP19.42■□□□□ 0.7
CHMP1A-209ENST00000550872 VGLL4Q14135 290 aa19.42■□□□□ 0.7
CHMP1A-209ENST00000550872 RASAL3Q86YV0 1011 aa19.42■□□□□ 0.7
CHMP1A-209ENST00000550872 IFNL3Q8IZI9 196 aa19.42■□□□□ 0.7
CHMP1A-209ENST00000550872 ELP3Q9H9T3 547 aa19.42■□□□□ 0.7
CHMP1A-209ENST00000550872 SERPINB13Q9UIV8 391 aa19.42■□□□□ 0.7
CHMP1A-209ENST00000550872 BAZ2AQ9UIF9 1905 aaKnown RBP19.42■□□□□ 0.7
CHMP1A-209ENST00000550872 CYP2D7A0A087X1C5 515 aa19.41■□□□□ 0.7
CHMP1A-209ENST00000550872 SLC10A3P09131 477 aa19.41■□□□□ 0.7
CHMP1A-209ENST00000550872 CHMLP26374 656 aa19.41■□□□□ 0.7
CHMP1A-209ENST00000550872 C12orf60Q5U649 245 aa19.41■□□□□ 0.7
CHMP1A-209ENST00000550872 CTR9Q6PD62 1173 aa19.41■□□□□ 0.7
CHMP1A-209ENST00000550872 ZNF589Q86UQ0 364 aaPredicted RBP19.41■□□□□ 0.7
CHMP1A-209ENST00000550872 METTL16Q86W50 562 aaKnown RBP19.41■□□□□ 0.7
CHMP1A-209ENST00000550872 EHD4Q9H223 541 aa19.41■□□□□ 0.7
CHMP1A-209ENST00000550872 EPB41L4AQ9HCS5 686 aaPredicted RBP19.41■□□□□ 0.7
CHMP1A-209ENST00000550872 ARPP21Q9UBL0 812 aaPredicted RBP19.41■□□□□ 0.7
CHMP1A-209ENST00000550872 CCDC171Q6TFL3 1326 aa19.41■□□□□ 0.7
CHMP1A-209ENST00000550872 CTNND1O60716 968 aaKnown RBP19.4■□□□□ 0.7
CHMP1A-209ENST00000550872 EVX2Q03828 476 aa19.4■□□□□ 0.7
CHMP1A-209ENST00000550872 VPS53Q5VIR6 699 aa19.4■□□□□ 0.7
CHMP1A-209ENST00000550872 RUFY2Q8WXA3 655 aa19.4■□□□□ 0.7
CHMP1A-209ENST00000550872 NAPBQ9H115 298 aa19.4■□□□□ 0.7
CHMP1A-209ENST00000550872 DNAJC18Q9H819 358 aa19.4■□□□□ 0.7
CHMP1A-209ENST00000550872 PRDM10Q9NQV6 1147 aa19.4■□□□□ 0.7
CHMP1A-209ENST00000550872 SNCAIPQ9Y6H5 919 aa19.4■□□□□ 0.7
CHMP1A-209ENST00000550872 MINDY4BA8MYZ0 360 aa19.39■□□□□ 0.69
CHMP1A-209ENST00000550872 FAM155AB1AL88 458 aaPredicted RBP19.39■□□□□ 0.69
CHMP1A-209ENST00000550872 AOC2O75106 756 aa19.39■□□□□ 0.69
CHMP1A-209ENST00000550872 MKRN3Q13064 507 aaKnown RBP19.39■□□□□ 0.69
CHMP1A-209ENST00000550872 SBK1Q52WX2 424 aa19.39■□□□□ 0.69
CHMP1A-209ENST00000550872 NOL9Q5SY16 702 aaKnown RBP19.39■□□□□ 0.69
CHMP1A-209ENST00000550872 SIPA1L1O43166 1804 aa19.39■□□□□ 0.69
CHMP1A-209ENST00000550872 HSPD1P10809 573 aaKnown RBP19.38■□□□□ 0.69
CHMP1A-209ENST00000550872 CAP2P40123 477 aa19.38■□□□□ 0.69
CHMP1A-209ENST00000550872 GABPAQ06546 454 aa19.38■□□□□ 0.69
CHMP1A-209ENST00000550872 NOGQ13253 232 aa19.38■□□□□ 0.69
CHMP1A-209ENST00000550872 RRP1BQ14684 758 aaKnown RBP19.38■□□□□ 0.69
CHMP1A-209ENST00000550872 SPRYD7Q5W111 196 aa19.38■□□□□ 0.69
CHMP1A-209ENST00000550872 ERO1BQ86YB8 467 aa19.38■□□□□ 0.69
CHMP1A-209ENST00000550872 SCYL3Q8IZE3 742 aa19.38■□□□□ 0.69
CHMP1A-209ENST00000550872 OPTNQ96CV9 577 aa19.38■□□□□ 0.69
CHMP1A-209ENST00000550872 DYNLL2Q96FJ2 89 aa19.38■□□□□ 0.69
CHMP1A-209ENST00000550872 WNK4Q96J92 1243 aa19.38■□□□□ 0.69
CHMP1A-209ENST00000550872 OTOFQ9HC10 1997 aa19.38■□□□□ 0.69
CHMP1A-209ENST00000550872 PICK1Q9NRD5 415 aa19.38■□□□□ 0.69
CHMP1A-209ENST00000550872 DDX60LQ5H9U9 1706 aaKnown RBP19.37■□□□□ 0.69
CHMP1A-209ENST00000550872 SMIM22K7EJ46 135 aa19.37■□□□□ 0.69
CHMP1A-209ENST00000550872 FOXN1O15353 648 aa19.37■□□□□ 0.69
CHMP1A-209ENST00000550872 FOXP2O15409 715 aa19.37■□□□□ 0.69
CHMP1A-209ENST00000550872 CTCFP49711 727 aaPredicted RBP19.37■□□□□ 0.69
CHMP1A-209ENST00000550872 CNKSR2Q8WXI2 1034 aa19.37■□□□□ 0.69
CHMP1A-209ENST00000550872 WBP1LQ9NX94 342 aa19.37■□□□□ 0.69
CHMP1A-209ENST00000550872 RAD50Q92878 1312 aa19.36■□□□□ 0.69
CHMP1A-209ENST00000550872 SPDYE5A6NIY4 337 aa19.36■□□□□ 0.69
CHMP1A-209ENST00000550872 MAP2K2P36507 400 aa19.36■□□□□ 0.69
CHMP1A-209ENST00000550872 KIF23Q02241 960 aaPredicted RBP19.36■□□□□ 0.69
CHMP1A-209ENST00000550872 ALX1Q15699 326 aa19.36■□□□□ 0.69
CHMP1A-209ENST00000550872 TATDN1Q6P1N9 297 aa19.36■□□□□ 0.69
CHMP1A-209ENST00000550872 STK11IPQ8N1F8 1099 aa19.36■□□□□ 0.69
CHMP1A-209ENST00000550872 SLC44A5Q8NCS7 719 aa19.36■□□□□ 0.69
CHMP1A-209ENST00000550872 OTUD5Q96G74 571 aa19.36■□□□□ 0.69
CHMP1A-209ENST00000550872 ZIC5Q96T25 663 aa19.36■□□□□ 0.69
CHMP1A-209ENST00000550872 SWAP70Q9UH65 585 aa19.36■□□□□ 0.69
CHMP1A-209ENST00000550872 CAPN15O75808 1086 aa19.35■□□□□ 0.69
CHMP1A-209ENST00000550872 GDF11O95390 407 aa19.35■□□□□ 0.69
CHMP1A-209ENST00000550872 FGAP02671 866 aa19.35■□□□□ 0.69
CHMP1A-209ENST00000550872 ZBTB48P10074 688 aaPredicted RBP19.35■□□□□ 0.69
CHMP1A-209ENST00000550872 SHMT1P34896 483 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms