RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 VIL1P09327 827 aaKnown RBP9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 CPA1P15085 419 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 GNAT2P19087 354 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 BTDP43251 543 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 SCNN1DP51172 638 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 RHBDL3P58872 404 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 PPP4CP60510 307 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 HAND2P61296 217 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 RNF20Q5VTR2 975 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 ARHGAP27Q6ZUM4 889 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 TBC1D10CQ8IV04 446 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 SH3RF3Q8TEJ3 882 aaPredicted RBP9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 SNX21Q969T3 373 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 DDRGK1Q96HY6 314 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 JAKMIP1Q96N16 626 aaKnown RBP9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 TTC14Q96N46 770 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 GMLQ99445 158 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 UPF3BQ9BZI7 483 aaKnown RBP9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 TM6SF1Q9BZW5 370 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 WDR70Q9NW82 654 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 HCSTQ9UBK5 93 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 ZNRF3Q9ULT6 936 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 TTF2Q9UNY4 1162 aaKnown RBP9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 PCDHAC2Q9Y5I4 1007 aa9.64□□□□□ -0.87
DEPDC4-207ENST00000549249 SIPA1L1O43166 1804 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 SMIM22K7EJ46 135 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 APPP05067 770 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 ZKSCAN1P17029 563 aaPredicted RBP9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 HSPA6P17066 643 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 CASTP20810 708 aaKnown RBP9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 MAP3K9P80192 1104 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 RSBN1LQ6PCB5 846 aaPredicted RBP9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 ADGRD1Q6QNK2 874 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 KIAA0825Q8IV33 1275 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 NKX2-3Q8TAU0 364 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 CRNKL1Q9BZJ0 848 aaKnown RBP9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 NAPBQ9H115 298 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 MKRN1Q9UHC7 482 aaKnown RBP9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 CTNNA3Q9UI47 895 aa9.63□□□□□ -0.87
DEPDC4-207ENST00000549249 E7EWF7 191 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 CRKP46108 304 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 SLC4A3P48751 1232 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 TDO2P48775 406 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 NEK4P51957 841 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 CXCL9Q07325 125 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 IMMTQ16891 758 aaKnown RBP9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 HHIPL2Q6UWX4 724 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 SLF2Q8IX21 1173 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 DCP1AQ9NPI6 582 aaPredicted RBP9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 MYH8P13535 1937 aa9.62□□□□□ -0.87
DEPDC4-207ENST00000549249 ZNF541Q9H0D2 1346 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 CYP2D7A0A087X1C5 515 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 FZD9O00144 591 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 ZNF213O14771 459 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 BAG3O95817 575 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 CYP2D6P10635 497 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 HDLBPQ00341 1268 aaKnown RBP9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 CTDSPL2Q05D32 466 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 CAMK2BQ13554 666 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 KRT32Q14532 448 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 CIAPIN1Q6FI81 312 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 APOBEC3HQ6NTF7 200 aaKnown RBP9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 GIMAP6Q6P9H5 292 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 CTR9Q6PD62 1173 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 RUFY3Q7L099 469 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 TEX11Q8IYF3 940 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 TEKT1Q969V4 418 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 TCEANC2Q96MN5 208 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 ZDHHC15Q96MV8 337 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 MRIQ9BWK5 157 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 NACAP1Q9BZK3 213 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 ATP8A2Q9NTI2 1148 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 PLA2G2EQ9NZK7 142 aa9.61□□□□□ -0.87
DEPDC4-207ENST00000549249 FLT1P17948 1338 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 NEDD4P46934 1319 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 MYO3BQ8WXR4 1341 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 SHTN1A0MZ66 631 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 EVI5O60447 810 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 RPS6KB1P23443 525 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 PSMA5P28066 241 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 AK2P54819 239 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 PPARAQ07869 468 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 CFAP100Q494V2 611 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 SBK1Q52WX2 424 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 CDC42EP5Q6NZY7 148 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 BLOC1S2Q6QNY1 142 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 CERS3Q8IU89 383 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 MAPKAPK5Q8IW41 473 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 HSCBQ8IWL3 235 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 MB21D2Q8IYB1 491 aaPredicted RBP9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 TGFBRAP1Q8WUH2 860 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 STAG1Q8WVM7 1258 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 JDP2Q8WYK2 163 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 NEK1Q96PY6 1258 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 NOL10Q9BSC4 688 aaKnown RBP9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 DDX4Q9NQI0 724 aaKnown RBP9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 INCENPQ9NQS7 918 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 ANAPC4Q9UJX5 808 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 SERPINA10Q9UK55 444 aa9.6□□□□□ -0.87
DEPDC4-207ENST00000549249 GOLGB1Q14789 3259 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms