RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CAP2P40123 477 aa11.41□□□□□ -0.58
YBX3-218ENST00000546298 MOGSQ13724 837 aa11.41□□□□□ -0.58
YBX3-218ENST00000546298 TTF1Q15361 905 aaPredicted RBP11.41□□□□□ -0.58
YBX3-218ENST00000546298 SLC9C1Q4G0N8 1177 aa11.41□□□□□ -0.58
YBX3-218ENST00000546298 GPAT2Q6NUI2 795 aa11.41□□□□□ -0.58
YBX3-218ENST00000546298 AS3MTQ9HBK9 375 aa11.41□□□□□ -0.58
YBX3-218ENST00000546298 ZBTB40Q9NUA8 1239 aa11.41□□□□□ -0.58
YBX3-218ENST00000546298 TLR7Q9NYK1 1049 aaKnown RBP11.41□□□□□ -0.58
YBX3-218ENST00000546298 PTCH2Q9Y6C5 1203 aa11.41□□□□□ -0.58
YBX3-218ENST00000546298 TRIM75PA6NK02 468 aa11.4□□□□□ -0.58
YBX3-218ENST00000546298 USP17L5A8MUK1 530 aa11.4□□□□□ -0.58
YBX3-218ENST00000546298 FMNL1O95466 1100 aaPredicted RBP11.4□□□□□ -0.58
YBX3-218ENST00000546298 HLA-DOAP06340 250 aa11.4□□□□□ -0.58
YBX3-218ENST00000546298 IFIT2P09913 472 aaKnown RBP11.4□□□□□ -0.58
YBX3-218ENST00000546298 PSMC4P43686 418 aa11.4□□□□□ -0.58
YBX3-218ENST00000546298 PABPC4Q13310 644 aaKnown RBP eCLIP11.4□□□□□ -0.58
YBX3-218ENST00000546298 PDE3AQ14432 1141 aa11.4□□□□□ -0.58
YBX3-218ENST00000546298 MAPKAPK5Q8IW41 473 aa11.4□□□□□ -0.58
YBX3-218ENST00000546298 CRACR2BQ8N4Y2 399 aaPredicted RBP11.4□□□□□ -0.58
YBX3-218ENST00000546298 ZNF280CQ8ND82 737 aa11.4□□□□□ -0.58
YBX3-218ENST00000546298 TGFBRAP1Q8WUH2 860 aa11.4□□□□□ -0.58
YBX3-218ENST00000546298 IL1RAPL2Q9NP60 686 aa11.4□□□□□ -0.58
YBX3-218ENST00000546298 GINM1Q9NU53 330 aa11.4□□□□□ -0.58
YBX3-218ENST00000546298 PNMA3Q9UL41 463 aa11.4□□□□□ -0.58
YBX3-218ENST00000546298 ADGRA2Q96PE1 1338 aa11.39□□□□□ -0.59
YBX3-218ENST00000546298 FAM196BA6NMK8 535 aa11.39□□□□□ -0.59
YBX3-218ENST00000546298 SLURP2P0DP57 97 aa11.39□□□□□ -0.59
YBX3-218ENST00000546298 CYP2C8P10632 490 aa11.39□□□□□ -0.59
YBX3-218ENST00000546298 FCGRTP55899 365 aa11.39□□□□□ -0.59
YBX3-218ENST00000546298 CAP1Q01518 475 aa11.39□□□□□ -0.59
YBX3-218ENST00000546298 SPP2Q13103 211 aa11.39□□□□□ -0.59
YBX3-218ENST00000546298 ADGRA1Q86SQ6 560 aa11.39□□□□□ -0.59
YBX3-218ENST00000546298 MAGEB6Q8N7X4 407 aa11.39□□□□□ -0.59
YBX3-218ENST00000546298 PROCA1Q8NCQ7 364 aaPredicted RBP11.39□□□□□ -0.59
YBX3-218ENST00000546298 SMCR8Q8TEV9 937 aaPredicted RBP11.39□□□□□ -0.59
YBX3-218ENST00000546298 ZNF333Q96JL9 665 aa11.39□□□□□ -0.59
YBX3-218ENST00000546298 ARHGAP39Q9C0H5 1083 aa11.39□□□□□ -0.59
YBX3-218ENST00000546298 SRRDQ9UH36 339 aa11.39□□□□□ -0.59
YBX3-218ENST00000546298 AGTPBP1Q9UPW5 1226 aa11.39□□□□□ -0.59
YBX3-218ENST00000546298 FLT1P17948 1338 aa11.38□□□□□ -0.59
YBX3-218ENST00000546298 APBB1O00213 710 aa11.38□□□□□ -0.59
YBX3-218ENST00000546298 ASNSP08243 561 aa11.38□□□□□ -0.59
YBX3-218ENST00000546298 BCRP11274 1271 aa11.38□□□□□ -0.59
YBX3-218ENST00000546298 USP5P45974 858 aa11.38□□□□□ -0.59
YBX3-218ENST00000546298 SLC4A8Q2Y0W8 1093 aa11.38□□□□□ -0.59
YBX3-218ENST00000546298 TTC6Q86TZ1 520 aa11.38□□□□□ -0.59
YBX3-218ENST00000546298 RAET1EQ8TD07 263 aa11.38□□□□□ -0.59
YBX3-218ENST00000546298 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.38□□□□□ -0.59
YBX3-218ENST00000546298 PALD1Q9ULE6 856 aa11.38□□□□□ -0.59
YBX3-218ENST00000546298 OSBPP22059 807 aa11.37□□□□□ -0.59
YBX3-218ENST00000546298 DYNLL1P63167 89 aaKnown RBP11.37□□□□□ -0.59
YBX3-218ENST00000546298 CCDC84Q86UT8 332 aaPredicted RBP11.37□□□□□ -0.59
YBX3-218ENST00000546298 METTL16Q86W50 562 aaKnown RBP11.37□□□□□ -0.59
YBX3-218ENST00000546298 SIRT2Q8IXJ6 389 aa11.37□□□□□ -0.59
YBX3-218ENST00000546298 MIGA1Q8NAN2 632 aa11.37□□□□□ -0.59
YBX3-218ENST00000546298 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
YBX3-218ENST00000546298 WDR18Q9BV38 432 aa11.37□□□□□ -0.59
YBX3-218ENST00000546298 ANTXR1Q9H6X2 564 aa11.37□□□□□ -0.59
YBX3-218ENST00000546298 OTOFQ9HC10 1997 aa11.36□□□□□ -0.59
YBX3-218ENST00000546298 POTEFA5A3E0 1075 aa11.36□□□□□ -0.59
YBX3-218ENST00000546298 C19orf81C9J6K1 198 aa11.36□□□□□ -0.59
YBX3-218ENST00000546298 ECM2O94769 699 aaPredicted RBP11.36□□□□□ -0.59
YBX3-218ENST00000546298 GRK4P32298 578 aa11.36□□□□□ -0.59
YBX3-218ENST00000546298 GCLCP48506 637 aaPredicted RBP11.36□□□□□ -0.59
YBX3-218ENST00000546298 HMGCS2P54868 508 aa11.36□□□□□ -0.59
YBX3-218ENST00000546298 SH3D19Q5HYK7 790 aa11.36□□□□□ -0.59
YBX3-218ENST00000546298 SLC9C2Q5TAH2 1124 aa11.36□□□□□ -0.59
YBX3-218ENST00000546298 PRPF38BQ5VTL8 546 aaKnown RBP11.36□□□□□ -0.59
YBX3-218ENST00000546298 TMOD4Q9NZQ9 345 aa11.36□□□□□ -0.59
YBX3-218ENST00000546298 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.36□□□□□ -0.59
YBX3-218ENST00000546298 SAP30BPQ9UHR5 308 aaKnown RBP11.36□□□□□ -0.59
YBX3-218ENST00000546298 NDUFB9Q9Y6M9 179 aa11.36□□□□□ -0.59
YBX3-218ENST00000546298 MYPNQ86TC9 1320 aa11.35□□□□□ -0.59
YBX3-218ENST00000546298 MAGEB6P1A0A0J9YX57 407 aa11.35□□□□□ -0.59
YBX3-218ENST00000546298 USP17L10C9JJH3 530 aa11.35□□□□□ -0.59
YBX3-218ENST00000546298 CTGFP29279 349 aa11.35□□□□□ -0.59
YBX3-218ENST00000546298 BACE1P56817 501 aa11.35□□□□□ -0.59
YBX3-218ENST00000546298 UBXN2AP68543 259 aa11.35□□□□□ -0.59
YBX3-218ENST00000546298 RRP1BQ14684 758 aaKnown RBP11.35□□□□□ -0.59
YBX3-218ENST00000546298 FAM110CQ1W6H9 321 aa11.35□□□□□ -0.59
YBX3-218ENST00000546298 NKX2-3Q8TAU0 364 aa11.35□□□□□ -0.59
YBX3-218ENST00000546298 SH3TC2Q8TF17 1288 aa11.35□□□□□ -0.59
YBX3-218ENST00000546298 COA7Q96BR5 231 aa11.35□□□□□ -0.59
YBX3-218ENST00000546298 DNAJC2Q99543 621 aaKnown RBP11.35□□□□□ -0.59
YBX3-218ENST00000546298 CRNKL1Q9BZJ0 848 aaKnown RBP11.35□□□□□ -0.59
YBX3-218ENST00000546298 BCL11AQ9H165 835 aa11.35□□□□□ -0.59
YBX3-218ENST00000546298 EHD4Q9H223 541 aa11.35□□□□□ -0.59
YBX3-218ENST00000546298 BIN2Q9UBW5 565 aaPredicted RBP11.35□□□□□ -0.59
YBX3-218ENST00000546298 SERPINB13Q9UIV8 391 aa11.35□□□□□ -0.59
YBX3-218ENST00000546298 GOLIM4O00461 696 aa11.34□□□□□ -0.59
YBX3-218ENST00000546298 TNPO2O14787 897 aaKnown RBP11.34□□□□□ -0.59
YBX3-218ENST00000546298 PDE6AP16499 860 aa11.34□□□□□ -0.59
YBX3-218ENST00000546298 ATP5JP18859 108 aa11.34□□□□□ -0.59
YBX3-218ENST00000546298 EN2P19622 333 aaPredicted RBP11.34□□□□□ -0.59
YBX3-218ENST00000546298 IRX3P78415 501 aaPredicted RBP11.34□□□□□ -0.59
YBX3-218ENST00000546298 TREML2Q5T2D2 321 aa11.34□□□□□ -0.59
YBX3-218ENST00000546298 ANKRD13CQ8N6S4 541 aa11.34□□□□□ -0.59
YBX3-218ENST00000546298 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
YBX3-218ENST00000546298 LRRCC1Q9C099 1032 aa11.34□□□□□ -0.59
YBX3-218ENST00000546298 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms