RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 PRRT2Q7Z6L0 340 aaPredicted RBP19.98■□□□□ 0.79
DDX55-212ENST00000544738 SLF2Q8IX21 1173 aa19.98■□□□□ 0.79
DDX55-212ENST00000544738 ANKLE1Q8NAG6 615 aa19.98■□□□□ 0.79
DDX55-212ENST00000544738 NEUROD6Q96NK8 337 aa19.98■□□□□ 0.79
DDX55-212ENST00000544738 PICK1Q9NRD5 415 aa19.98■□□□□ 0.79
DDX55-212ENST00000544738 PNMA6EA0A0J9YXQ4 647 aa19.97■□□□□ 0.79
DDX55-212ENST00000544738 RASGRF1Q13972 1273 aa19.97■□□□□ 0.79
DDX55-212ENST00000544738 ANKRD13CQ8N6S4 541 aa19.97■□□□□ 0.79
DDX55-212ENST00000544738 GORABQ5T7V8 394 aa19.96■□□□□ 0.79
DDX55-212ENST00000544738 ZFPM1Q8IX07 1006 aa19.96■□□□□ 0.79
DDX55-212ENST00000544738 C11orf49Q9H6J7 331 aa19.96■□□□□ 0.79
DDX55-212ENST00000544738 USP40Q9NVE5 1235 aa19.96■□□□□ 0.79
DDX55-212ENST00000544738 ABCF2Q9UG63 623 aa19.96■□□□□ 0.79
DDX55-212ENST00000544738 MGAMO43451 1857 aa19.96■□□□□ 0.79
DDX55-212ENST00000544738 AK9Q5TCS8 1911 aa19.96■□□□□ 0.79
DDX55-212ENST00000544738 PTPRAP18433 802 aa19.95■□□□□ 0.78
DDX55-212ENST00000544738 DZIP1Q86YF9 867 aaKnown RBP19.95■□□□□ 0.78
DDX55-212ENST00000544738 SCYL3Q8IZE3 742 aa19.95■□□□□ 0.78
DDX55-212ENST00000544738 HMX1Q9NP08 348 aaPredicted RBP19.95■□□□□ 0.78
DDX55-212ENST00000544738 FAM198AQ9UFP1 575 aa19.95■□□□□ 0.78
DDX55-212ENST00000544738 AFG3L2Q9Y4W6 797 aa19.95■□□□□ 0.78
DDX55-212ENST00000544738 ALPK3Q96L96 1907 aa19.94■□□□□ 0.78
DDX55-212ENST00000544738 ATP8B2P98198 1209 aa19.94■□□□□ 0.78
DDX55-212ENST00000544738 POLA2Q14181 598 aa19.94■□□□□ 0.78
DDX55-212ENST00000544738 FAM163AQ96GL9 167 aaPredicted RBP19.94■□□□□ 0.78
DDX55-212ENST00000544738 FAM161BQ96MY7 647 aa19.94■□□□□ 0.78
DDX55-212ENST00000544738 SLC45A1Q9Y2W3 748 aa19.94■□□□□ 0.78
DDX55-212ENST00000544738 TRIM75PA6NK02 468 aa19.93■□□□□ 0.78
DDX55-212ENST00000544738 PHF20L1A8MW92 1017 aa19.93■□□□□ 0.78
DDX55-212ENST00000544738 HMGCRP04035 888 aa19.93■□□□□ 0.78
DDX55-212ENST00000544738 TRIM32Q13049 653 aa19.93■□□□□ 0.78
DDX55-212ENST00000544738 ITPRIPQ8IWB1 547 aa19.93■□□□□ 0.78
DDX55-212ENST00000544738 SSH3Q8TE77 659 aa19.93■□□□□ 0.78
DDX55-212ENST00000544738 GPR108Q9NPR9 543 aa19.93■□□□□ 0.78
DDX55-212ENST00000544738 GAKO14976 1311 aa19.93■□□□□ 0.78
DDX55-212ENST00000544738 RPTORQ8N122 1335 aa19.93■□□□□ 0.78
DDX55-212ENST00000544738 DOCK3Q8IZD9 2030 aa19.92■□□□□ 0.78
DDX55-212ENST00000544738 ERICH6Q7L0X2 663 aa19.92■□□□□ 0.78
DDX55-212ENST00000544738 IDI2Q9BXS1 227 aa19.92■□□□□ 0.78
DDX55-212ENST00000544738 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.92■□□□□ 0.78
DDX55-212ENST00000544738 ENTPD3O75355 529 aa19.91■□□□□ 0.78
DDX55-212ENST00000544738 UQCRFS1P1P0C7P4 283 aa19.91■□□□□ 0.78
DDX55-212ENST00000544738 ARID4AP29374 1257 aaPredicted RBP19.91■□□□□ 0.78
DDX55-212ENST00000544738 MDM2Q00987 491 aaPredicted RBP19.91■□□□□ 0.78
DDX55-212ENST00000544738 OS9Q13438 667 aaPredicted RBP19.91■□□□□ 0.78
DDX55-212ENST00000544738 ZSCAN29Q8IWY8 852 aaPredicted RBP19.91■□□□□ 0.78
DDX55-212ENST00000544738 SPATA5Q8NB90 893 aa19.91■□□□□ 0.78
DDX55-212ENST00000544738 GUCD1Q96NT3 240 aa19.91■□□□□ 0.78
DDX55-212ENST00000544738 HMG20BQ9P0W2 317 aa19.91■□□□□ 0.78
DDX55-212ENST00000544738 LDHCP07864 332 aa19.9■□□□□ 0.78
DDX55-212ENST00000544738 RLBP1P12271 317 aa19.9■□□□□ 0.78
DDX55-212ENST00000544738 GSTO1P78417 241 aa19.9■□□□□ 0.78
DDX55-212ENST00000544738 EYSQ5T1H1 3165 aa19.9■□□□□ 0.78
DDX55-212ENST00000544738 PRUNE2Q8WUY3 3088 aa19.89■□□□□ 0.78
DDX55-212ENST00000544738 MROH7-TTC4A0A0A0MT08 1334 aa19.89■□□□□ 0.77
DDX55-212ENST00000544738 POTEB2H3BUK9 544 aa19.89■□□□□ 0.77
DDX55-212ENST00000544738 SURF6O75683 361 aaKnown RBP19.89■□□□□ 0.77
DDX55-212ENST00000544738 SLURP2P0DP57 97 aa19.89■□□□□ 0.77
DDX55-212ENST00000544738 MS4A1P11836 297 aa19.89■□□□□ 0.77
DDX55-212ENST00000544738 MECOMQ03112 1051 aa19.89■□□□□ 0.77
DDX55-212ENST00000544738 FAM110CQ1W6H9 321 aa19.89■□□□□ 0.77
DDX55-212ENST00000544738 TREML2Q5T2D2 321 aa19.89■□□□□ 0.77
DDX55-212ENST00000544738 CCDC84Q86UT8 332 aaPredicted RBP19.89■□□□□ 0.77
DDX55-212ENST00000544738 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.89■□□□□ 0.77
DDX55-212ENST00000544738 MYH2Q9UKX2 1941 aa19.89■□□□□ 0.77
DDX55-212ENST00000544738 OGDHLQ9ULD0 1010 aa19.89■□□□□ 0.77
DDX55-212ENST00000544738 AGTPBP1Q9UPW5 1226 aa19.89■□□□□ 0.77
DDX55-212ENST00000544738 MAP4K4O95819 1239 aaPredicted RBP19.88■□□□□ 0.77
DDX55-212ENST00000544738 BTDP43251 543 aa19.88■□□□□ 0.77
DDX55-212ENST00000544738 RGS3P49796 1198 aa19.88■□□□□ 0.77
DDX55-212ENST00000544738 TNNI3KQ59H18 835 aa19.88■□□□□ 0.77
DDX55-212ENST00000544738 CCDC158Q5M9N0 1113 aa19.88■□□□□ 0.77
DDX55-212ENST00000544738 GJD2Q9UKL4 321 aa19.88■□□□□ 0.77
DDX55-212ENST00000544738 PNMA3Q9UL41 463 aa19.88■□□□□ 0.77
DDX55-212ENST00000544738 NOP58Q9Y2X3 529 aaKnown RBP19.88■□□□□ 0.77
DDX55-212ENST00000544738 FPGT-TNNI3KV9GXZ4 949 aa19.88■□□□□ 0.77
DDX55-212ENST00000544738 GPR75-ASB3A0A0A6YYF3 556 aa19.87■□□□□ 0.77
DDX55-212ENST00000544738 FAM109BQ6ICB4 259 aaPredicted RBP19.87■□□□□ 0.77
DDX55-212ENST00000544738 C1orf115Q9H7X2 142 aa19.87■□□□□ 0.77
DDX55-212ENST00000544738 PRDM6Q9NQX0 595 aa19.87■□□□□ 0.77
DDX55-212ENST00000544738 DNAH12Q6ZR08 3092 aa19.87■□□□□ 0.77
DDX55-212ENST00000544738 PFASO15067 1338 aa19.86■□□□□ 0.77
DDX55-212ENST00000544738 CTNND1O60716 968 aaKnown RBP19.86■□□□□ 0.77
DDX55-212ENST00000544738 CYP2B6P20813 491 aa19.86■□□□□ 0.77
DDX55-212ENST00000544738 MCAMP43121 646 aa19.86■□□□□ 0.77
DDX55-212ENST00000544738 TTC39AQ5SRH9 613 aa19.86■□□□□ 0.77
DDX55-212ENST00000544738 PI16Q6UXB8 463 aa19.86■□□□□ 0.77
DDX55-212ENST00000544738 NSUN4Q96CB9 384 aaKnown RBP19.86■□□□□ 0.77
DDX55-212ENST00000544738 RAI14Q9P0K7 980 aa19.86■□□□□ 0.77
DDX55-212ENST00000544738 LRP2BPQ9P2M1 347 aa19.86■□□□□ 0.77
DDX55-212ENST00000544738 SPTBN5Q9NRC6 3674 aaKnown RBP19.85■□□□□ 0.77
DDX55-212ENST00000544738 NPM3O75607 178 aaKnown RBP19.85■□□□□ 0.77
DDX55-212ENST00000544738 TBC1D9Q6ZT07 1266 aa19.85■□□□□ 0.77
DDX55-212ENST00000544738 SH3BP5LQ7L8J4 393 aa19.85■□□□□ 0.77
DDX55-212ENST00000544738 RFX7Q2KHR2 1363 aa19.84■□□□□ 0.77
DDX55-212ENST00000544738 IGSF3O75054 1194 aa19.84■□□□□ 0.77
DDX55-212ENST00000544738 PRKAR2AP13861 404 aaKnown RBP19.84■□□□□ 0.77
DDX55-212ENST00000544738 GCLCP48506 637 aaPredicted RBP19.84■□□□□ 0.77
DDX55-212ENST00000544738 LRRC26Q2I0M4 334 aa19.84■□□□□ 0.77
DDX55-212ENST00000544738 ZNF384Q8TF68 577 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms