RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 DGKZQ13574 1117 aa11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 TTF1Q15361 905 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 TMED8Q6PL24 325 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 ZNF467Q7Z7K2 595 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 SH3RF3Q8TEJ3 882 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 PTPN18Q99952 460 aa11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 LRRCC1Q9C099 1032 aa11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 R3HDMLQ9H3Y0 253 aa11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 AATFQ9NY61 560 aaKnown RBP eCLIP11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 NDUFB9Q9Y6M9 179 aa11.85□□□□□ -0.51
TNFRSF1A-214ENST00000543048 MYH7P12883 1935 aa11.84□□□□□ -0.51
TNFRSF1A-214ENST00000543048 RFX7Q2KHR2 1363 aa11.84□□□□□ -0.51
TNFRSF1A-214ENST00000543048 CETPP11597 493 aa11.84□□□□□ -0.51
TNFRSF1A-214ENST00000543048 NOL9Q5SY16 702 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1A-214ENST00000543048 ADGRA1Q86SQ6 560 aa11.84□□□□□ -0.51
TNFRSF1A-214ENST00000543048 ZNF296Q8WUU4 475 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-214ENST00000543048 MCOLN1Q9GZU1 580 aa11.84□□□□□ -0.51
TNFRSF1A-214ENST00000543048 OSBPL5Q9H0X9 879 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-214ENST00000543048 ANTXR1Q9H6X2 564 aa11.84□□□□□ -0.51
TNFRSF1A-214ENST00000543048 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-214ENST00000543048 CCL15-CCL14A0A0B4J2E2 113 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 IRF6O14896 467 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 CTNND1O60716 968 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 FKTNO75072 461 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ATP5JP18859 108 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 TIE1P35590 1138 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 SNAPC2Q13487 334 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 CCL15Q16663 113 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 MAGEB6Q8N7X4 407 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 TGFBRAP1Q8WUH2 860 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 BRI3BPQ8WY22 251 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ABHD8Q96I13 439 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 DHX36Q9H2U1 1008 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 PCDHB15Q9Y5E8 787 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 PHIPQ8WWQ0 1821 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ATAD5Q96QE3 1844 aa11.83□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ATRNL1Q5VV63 1379 aa11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 CXCL11O14625 94 aa11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ATMINO43313 823 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 SMARCA5O60264 1052 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 DYNLL1P63167 89 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ASTLQ6HA08 431 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 CTU1Q7Z7A3 348 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 CERS3Q8IU89 383 aa11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 FOXP4Q8IVH2 680 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 MAPKAPK5Q8IW41 473 aa11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 BOLA2Q9H3K6 86 aa11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.82□□□□□ -0.522e-7■■■□□ 17.4
TNFRSF1A-214ENST00000543048 PICK1Q9NRD5 415 aa11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 PI4KBQ9UBF8 816 aa11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 DOCK1Q14185 1865 aa11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 COL2A1P02458 1487 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 PTPRFP10586 1907 aa11.82□□□□□ -0.52
TNFRSF1A-214ENST00000543048 GOLIM4O00461 696 aa11.81□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ECM2O94769 699 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-214ENST00000543048 SLURP2P0DP57 97 aa11.81□□□□□ -0.52
TNFRSF1A-214ENST00000543048 CRHR2Q13324 411 aa11.81□□□□□ -0.52
TNFRSF1A-214ENST00000543048 SLC9C2Q5TAH2 1124 aa11.81□□□□□ -0.52
TNFRSF1A-214ENST00000543048 SCYL3Q8IZE3 742 aa11.81□□□□□ -0.52
TNFRSF1A-214ENST00000543048 CRBNQ96SW2 442 aa11.81□□□□□ -0.52
TNFRSF1A-214ENST00000543048 DNAJC2Q99543 621 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-214ENST00000543048 HAUS7Q99871 368 aa11.81□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ZFYVE28Q9HCC9 887 aa11.81□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ZCCHC17Q9NP64 241 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-214ENST00000543048 KCNH4Q9UQ05 1017 aa11.81□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ZHX2Q9Y6X8 837 aa11.81□□□□□ -0.52
TNFRSF1A-214ENST00000543048 TTLL13PA6NNM8 815 aa11.8□□□□□ -0.52
TNFRSF1A-214ENST00000543048 BTBD19C9JJ37 291 aa11.8□□□□□ -0.52
TNFRSF1A-214ENST00000543048 PTPRAP18433 802 aa11.8□□□□□ -0.52
TNFRSF1A-214ENST00000543048 USP5P45974 858 aa11.8□□□□□ -0.52
TNFRSF1A-214ENST00000543048 TAF1CQ15572 869 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF1A-214ENST00000543048 PKN2Q16513 984 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-214ENST00000543048 FAM43AQ8N2R8 423 aa11.8□□□□□ -0.52
TNFRSF1A-214ENST00000543048 MIGA1Q8NAN2 632 aa11.8□□□□□ -0.52
TNFRSF1A-214ENST00000543048 PAG1Q9NWQ8 432 aa11.8□□□□□ -0.52
TNFRSF1A-214ENST00000543048 HERC5Q9UII4 1024 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-214ENST00000543048 SIPA1L1O43166 1804 aa11.79□□□□□ -0.52
TNFRSF1A-214ENST00000543048 MAGEB6P1A0A0J9YX57 407 aa11.79□□□□□ -0.52
TNFRSF1A-214ENST00000543048 CCDC85CA6NKD9 419 aa11.79□□□□□ -0.52
TNFRSF1A-214ENST00000543048 PDE6AP16499 860 aa11.79□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ATN1P54259 1190 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF1A-214ENST00000543048 SP3Q02447 781 aa11.79□□□□□ -0.52
TNFRSF1A-214ENST00000543048 METTL16Q86W50 562 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ERO1AQ96HE7 468 aa11.79□□□□□ -0.52
TNFRSF1A-214ENST00000543048 TMEM106CQ9BVX2 250 aa11.79□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ECHDC1Q9NTX5 307 aa11.79□□□□□ -0.52
TNFRSF1A-214ENST00000543048 PALD1Q9ULE6 856 aa11.79□□□□□ -0.52
TNFRSF1A-214ENST00000543048 AFG3L2Q9Y4W6 797 aa11.79□□□□□ -0.52
TNFRSF1A-214ENST00000543048 FLT1P17948 1338 aa11.79□□□□□ -0.52
TNFRSF1A-214ENST00000543048 FAM196BA6NMK8 535 aa11.78□□□□□ -0.52
TNFRSF1A-214ENST00000543048 HLA-DOAP06340 250 aa11.78□□□□□ -0.52
TNFRSF1A-214ENST00000543048 CAP2P40123 477 aa11.78□□□□□ -0.52
TNFRSF1A-214ENST00000543048 AAMPQ13685 434 aa11.78□□□□□ -0.52
TNFRSF1A-214ENST00000543048 FASTKD5Q7L8L6 764 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-214ENST00000543048 ANKRD23Q86SG2 305 aa11.78□□□□□ -0.52
TNFRSF1A-214ENST00000543048 CRACR2BQ8N4Y2 399 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-214ENST00000543048 EDC3Q96F86 508 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-214ENST00000543048 RIOK1Q9BRS2 568 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-214ENST00000543048 TRIM34Q9BYJ4 488 aa11.78□□□□□ -0.52
TNFRSF1A-214ENST00000543048 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms