RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 CLEC11AQ9Y240 323 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.99□□□□□ -1.29
ABCF1-207ENST00000542772 RBM8AQ9Y5S9 174 aaKnown RBP6.99□□□□□ -1.29
ABCF1-207ENST00000542772 PASKQ96RG2 1323 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 DDX60LQ5H9U9 1706 aaKnown RBP6.98□□□□□ -1.29
ABCF1-207ENST00000542772 ROBO3Q96MS0 1386 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 CYP2D7A0A087X1C5 515 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 MINDY4BA8MYZ0 360 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 ORC4O43929 436 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 HLA-DOAP06340 250 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 CYP2D6P10635 497 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 NOVP48745 357 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 TDO2P48775 406 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 CDK8P49336 464 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 RBM25P49756 843 aaKnown RBP6.98□□□□□ -1.29
ABCF1-207ENST00000542772 ANAPC15P60006 121 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 EVX2Q03828 476 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 FSTL1Q12841 308 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 IMMTQ16891 758 aaKnown RBP6.98□□□□□ -1.29
ABCF1-207ENST00000542772 AKNAD1Q5T1N1 836 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 PRAMEF18Q5VWM3 479 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 MAP1SQ66K74 1059 aaPredicted RBP6.98□□□□□ -1.29
ABCF1-207ENST00000542772 CREB3L3Q68CJ9 461 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 DLK2Q6UY11 383 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 CDAN1Q8IWY9 1227 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 AMOTL1Q8IY63 956 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 RASEFQ8IZ41 740 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 IL27Q8NEV9 243 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 STAG1Q8WVM7 1258 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 KLRG1Q96E93 195 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 CSRNP1Q96S65 589 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 GLIS2Q9BZE0 524 aaPredicted RBP6.98□□□□□ -1.29
ABCF1-207ENST00000542772 DNAJC18Q9H819 358 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 SWAP70Q9UH65 585 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 SAP30BPQ9UHR5 308 aaKnown RBP6.98□□□□□ -1.29
ABCF1-207ENST00000542772 SCAF8Q9UPN6 1271 aaKnown RBP6.98□□□□□ -1.29
ABCF1-207ENST00000542772 SIPA1L1O43166 1804 aa6.98□□□□□ -1.29
ABCF1-207ENST00000542772 ADM5C9JUS6 153 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 E7EWF7 191 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 CTNND1O60716 968 aaKnown RBP6.97□□□□□ -1.29
ABCF1-207ENST00000542772 SLC3A2P08195 630 aaKnown RBP6.97□□□□□ -1.29
ABCF1-207ENST00000542772 SHMT1P34896 483 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 CAP2P40123 477 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 FKBP1BP68106 108 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 CTDSPL2Q05D32 466 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 RRP1BQ14684 758 aaKnown RBP6.97□□□□□ -1.29
ABCF1-207ENST00000542772 LDLRAD1Q5T700 205 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 RNF20Q5VTR2 975 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 CST9Q5W186 159 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 MFSD6Q6ZSS7 791 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 ZSCAN29Q8IWY8 852 aaPredicted RBP6.97□□□□□ -1.29
ABCF1-207ENST00000542772 FBXL16Q8N461 479 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 SMC1BQ8NDV3 1235 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 CDCA5Q96FF9 252 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 DYNLL2Q96FJ2 89 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 CCDC17Q96LX7 622 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 KIF2CQ99661 725 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 MTA3Q9BTC8 594 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 TM6SF1Q9BZW5 370 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 RNF41Q9H4P4 317 aaPredicted RBP6.97□□□□□ -1.29
ABCF1-207ENST00000542772 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.97□□□□□ -1.29
ABCF1-207ENST00000542772 ZNF287Q9HBT7 754 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 INCENPQ9NQS7 918 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 GINM1Q9NU53 330 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 TCP11L1Q9NUJ3 509 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 ZSWIM5Q9P217 1185 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 SNX14Q9Y5W7 946 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 TAF6LQ9Y6J9 622 aa6.97□□□□□ -1.29
ABCF1-207ENST00000542772 NAV1Q8NEY1 1877 aa6.96□□□□□ -1.29
ABCF1-207ENST00000542772 TRAF5O00463 557 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 PPP1R12BO60237 982 aaPredicted RBP6.96□□□□□ -1.3
ABCF1-207ENST00000542772 SLURP2P0DP57 97 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 ZKSCAN1P17029 563 aaPredicted RBP6.96□□□□□ -1.3
ABCF1-207ENST00000542772 RASA1P20936 1047 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 HAND2P61296 217 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 MAP3K9P80192 1104 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 EXOSC10Q01780 885 aaKnown RBP6.96□□□□□ -1.3
ABCF1-207ENST00000542772 FMR1Q06787 632 aaKnown RBP eCLIP6.96□□□□□ -1.34e-6■■■■□ 21.6
ABCF1-207ENST00000542772 PDE4BQ07343 736 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 KRT32Q14532 448 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 DCAF15Q66K64 600 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 STOX1Q6ZVD7 989 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 MIGA2Q7L4E1 593 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 TBC1D10CQ8IV04 446 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 ZNF444Q8N0Y2 327 aaPredicted RBP6.96□□□□□ -1.3
ABCF1-207ENST00000542772 NEDD1Q8NHV4 660 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 NKX2-3Q8TAU0 364 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 ANKS1AQ92625 1134 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 TTC14Q96N46 770 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.96□□□□□ -1.3
ABCF1-207ENST00000542772 ZNF341Q9BYN7 854 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 C22orf23Q9BZE7 217 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 KRT23Q9C075 422 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 ALDH8A1Q9H2A2 487 aaPredicted RBP6.96□□□□□ -1.3
ABCF1-207ENST00000542772 CNNM2Q9H8M5 875 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 MKNK2Q9HBH9 465 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 ZSWIM6Q9HCJ5 1215 aa6.96□□□□□ -1.3
ABCF1-207ENST00000542772 SSC5DA1L4H1 1573 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 LAMA4Q16363 1823 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 IGKV6D-41A0A0C4DH26 115 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms