RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 CDK5R2Q13319 367 aa6.54□□□□□ -1.36
LEMD3-204ENST00000542032 CCDC27Q2M243 656 aa6.54□□□□□ -1.36
LEMD3-204ENST00000542032 DUSP27Q5VZP5 1158 aa6.54□□□□□ -1.36
LEMD3-204ENST00000542032 TTBK2Q6IQ55 1244 aa6.54□□□□□ -1.36
LEMD3-204ENST00000542032 ACSBG1Q96GR2 724 aa6.54□□□□□ -1.36
LEMD3-204ENST00000542032 LGR6Q9HBX8 967 aa6.54□□□□□ -1.36
LEMD3-204ENST00000542032 ANGEL1Q9UNK9 670 aaKnown RBP6.54□□□□□ -1.36
LEMD3-204ENST00000542032 ST13P50502 369 aaKnown RBP6.53□□□□□ -1.36
LEMD3-204ENST00000542032 TAGLNQ01995 201 aaKnown RBP6.53□□□□□ -1.36
LEMD3-204ENST00000542032 INPP5AQ14642 412 aa6.53□□□□□ -1.36
LEMD3-204ENST00000542032 PPM1JQ5JR12 505 aa6.53□□□□□ -1.36
LEMD3-204ENST00000542032 ZBTB37Q5TC79 503 aa6.53□□□□□ -1.36
LEMD3-204ENST00000542032 MEI1Q5TIA1 1274 aa6.53□□□□□ -1.36
LEMD3-204ENST00000542032 CYFIP1Q7L576 1253 aa6.53□□□□□ -1.36
LEMD3-204ENST00000542032 CCDC39Q9UFE4 941 aa6.53□□□□□ -1.36
LEMD3-204ENST00000542032 ZC3H7BQ9UGR2 993 aaKnown RBP6.53□□□□□ -1.36
LEMD3-204ENST00000542032 PCDHA4Q9UN74 947 aa6.53□□□□□ -1.36
LEMD3-204ENST00000542032 DCDC2CA8MYV0 355 aa6.52□□□□□ -1.37
LEMD3-204ENST00000542032 RNGTTO60942 597 aaKnown RBP6.52□□□□□ -1.37
LEMD3-204ENST00000542032 FAM87AP0C7U9 286 aa6.52□□□□□ -1.37
LEMD3-204ENST00000542032 CCDC85BQ15834 202 aaPredicted RBP6.52□□□□□ -1.37
LEMD3-204ENST00000542032 PKN1Q16512 942 aa6.52□□□□□ -1.37
LEMD3-204ENST00000542032 CYP27C1Q4G0S4 372 aa6.52□□□□□ -1.37
LEMD3-204ENST00000542032 AGMOQ6ZNB7 445 aa6.52□□□□□ -1.37
LEMD3-204ENST00000542032 FAM214BQ7L5A3 538 aa6.52□□□□□ -1.37
LEMD3-204ENST00000542032 UBE3DQ7Z6J8 389 aa6.52□□□□□ -1.37
LEMD3-204ENST00000542032 C12orf40Q86WS4 652 aa6.52□□□□□ -1.37
LEMD3-204ENST00000542032 DUSP23Q9BVJ7 150 aa6.52□□□□□ -1.37
LEMD3-204ENST00000542032 BSDC1Q9NW68 430 aaPredicted RBP6.52□□□□□ -1.37
LEMD3-204ENST00000542032 USP31Q70CQ4 1352 aa6.52□□□□□ -1.37
LEMD3-204ENST00000542032 LEFTY1O75610 366 aa6.51□□□□□ -1.37
LEMD3-204ENST00000542032 PSMD2Q13200 908 aa6.51□□□□□ -1.37
LEMD3-204ENST00000542032 LRFN4Q6PJG9 635 aa6.51□□□□□ -1.37
LEMD3-204ENST00000542032 VSIG10LQ86VR7 867 aa6.51□□□□□ -1.37
LEMD3-204ENST00000542032 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.51□□□□□ -1.37
LEMD3-204ENST00000542032 NOC4LQ9BVI4 516 aaKnown RBP6.51□□□□□ -1.37
LEMD3-204ENST00000542032 CSADQ9Y600 493 aa6.51□□□□□ -1.37
LEMD3-204ENST00000542032 SNCAIPQ9Y6H5 919 aa6.51□□□□□ -1.37
LEMD3-204ENST00000542032 LIG3P49916 1009 aa6.5□□□□□ -1.37
LEMD3-204ENST00000542032 TAF1CQ15572 869 aaPredicted RBP6.5□□□□□ -1.37
LEMD3-204ENST00000542032 KRTAP19-4Q3LI73 84 aa6.5□□□□□ -1.37
LEMD3-204ENST00000542032 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.5□□□□□ -1.37
LEMD3-204ENST00000542032 WFDC3Q8IUB2 231 aa6.5□□□□□ -1.37
LEMD3-204ENST00000542032 PLPPR2Q96GM1 343 aa6.5□□□□□ -1.37
LEMD3-204ENST00000542032 CRELD1Q96HD1 420 aa6.5□□□□□ -1.37
LEMD3-204ENST00000542032 FAM161BQ96MY7 647 aa6.5□□□□□ -1.37
LEMD3-204ENST00000542032 MKNK2Q9HBH9 465 aa6.5□□□□□ -1.37
LEMD3-204ENST00000542032 PCDHB5Q9Y5E4 795 aa6.5□□□□□ -1.37
LEMD3-204ENST00000542032 U3KQE9 123 aa6.5□□□□□ -1.37
LEMD3-204ENST00000542032 GFRA2O00451 464 aa6.49□□□□□ -1.37
LEMD3-204ENST00000542032 CAP2P40123 477 aa6.49□□□□□ -1.37
LEMD3-204ENST00000542032 CDK8P49336 464 aa6.49□□□□□ -1.37
LEMD3-204ENST00000542032 XPCQ01831 940 aaPredicted RBP6.49□□□□□ -1.37
LEMD3-204ENST00000542032 SORBS3O60504 671 aa6.48□□□□□ -1.37
LEMD3-204ENST00000542032 RLBP1P12271 317 aa6.48□□□□□ -1.37
LEMD3-204ENST00000542032 TFE3P19532 575 aaPredicted RBP6.48□□□□□ -1.37
LEMD3-204ENST00000542032 OXCT1P55809 520 aa6.48□□□□□ -1.37
LEMD3-204ENST00000542032 HDXQ7Z353 690 aa6.48□□□□□ -1.37
LEMD3-204ENST00000542032 KCT2Q8NC54 265 aa6.48□□□□□ -1.37
LEMD3-204ENST00000542032 ELMO3Q96BJ8 720 aa6.48□□□□□ -1.37
LEMD3-204ENST00000542032 HEXIM2Q96MH2 286 aaKnown RBP6.48□□□□□ -1.37
LEMD3-204ENST00000542032 WNT10AQ9GZT5 417 aa6.48□□□□□ -1.37
LEMD3-204ENST00000542032 LRRC4CQ9HCJ2 640 aa6.48□□□□□ -1.37
LEMD3-204ENST00000542032 SSU72Q9NP77 194 aaKnown RBP6.48□□□□□ -1.37
LEMD3-204ENST00000542032 TACC3Q9Y6A5 838 aa6.48□□□□□ -1.37
LEMD3-204ENST00000542032 SEPT6Q14141 434 aa6.47□□□□□ -1.37
LEMD3-204ENST00000542032 SLBPQ14493 270 aaKnown RBP eCLIP6.47□□□□□ -1.37
LEMD3-204ENST00000542032 WIPI1Q5MNZ9 446 aaPredicted RBP6.47□□□□□ -1.37
LEMD3-204ENST00000542032 TP53INP2Q8IXH6 220 aa6.47□□□□□ -1.37
LEMD3-204ENST00000542032 TOP6BLQ8N6T0 577 aa6.47□□□□□ -1.37
LEMD3-204ENST00000542032 ZNF507Q8TCN5 953 aa6.47□□□□□ -1.37
LEMD3-204ENST00000542032 BCL7CQ8WUZ0 217 aaPredicted RBP6.47□□□□□ -1.37
LEMD3-204ENST00000542032 FBXL18Q96ME1 805 aa6.47□□□□□ -1.37
LEMD3-204ENST00000542032 FBRSQ9HAH7 460 aa6.47□□□□□ -1.37
LEMD3-204ENST00000542032 PRDM10Q9NQV6 1147 aa6.47□□□□□ -1.37
LEMD3-204ENST00000542032 IGF2BP3O00425 579 aaKnown RBP eCLIP6.46□□□□□ -1.38
LEMD3-204ENST00000542032 FARP2O94887 1054 aaPredicted RBP6.46□□□□□ -1.38
LEMD3-204ENST00000542032 LRIG2O94898 1065 aa6.46□□□□□ -1.38
LEMD3-204ENST00000542032 EOMESO95936 686 aa6.46□□□□□ -1.38
LEMD3-204ENST00000542032 FAM181AQ8N9Y4 354 aa6.46□□□□□ -1.38
LEMD3-204ENST00000542032 PHC3Q8NDX5 983 aa6.46□□□□□ -1.38
LEMD3-204ENST00000542032 NETO1Q8TDF5 533 aa6.46□□□□□ -1.38
LEMD3-204ENST00000542032 MISP3Q96FF7 219 aa6.46□□□□□ -1.38
LEMD3-204ENST00000542032 PAK6Q9NQU5 681 aaPredicted RBP6.46□□□□□ -1.38
LEMD3-204ENST00000542032 PLAGL2Q9UPG8 496 aa6.46□□□□□ -1.38
LEMD3-204ENST00000542032 PRAMEF27A3QJZ7 478 aa6.45□□□□□ -1.38
LEMD3-204ENST00000542032 PAPLNO95428 1278 aa6.45□□□□□ -1.38
LEMD3-204ENST00000542032 CEACAM5P06731 702 aa6.45□□□□□ -1.38
LEMD3-204ENST00000542032 MAP3K11Q16584 847 aa6.45□□□□□ -1.38
LEMD3-204ENST00000542032 NKG7Q16617 165 aa6.45□□□□□ -1.38
LEMD3-204ENST00000542032 ARMCX6Q7L4S7 300 aa6.45□□□□□ -1.38
LEMD3-204ENST00000542032 CCDC84Q86UT8 332 aaPredicted RBP6.45□□□□□ -1.38
LEMD3-204ENST00000542032 PLD6Q8N2A8 252 aaKnown RBP6.45□□□□□ -1.38
LEMD3-204ENST00000542032 RHOVQ96L33 236 aa6.45□□□□□ -1.38
LEMD3-204ENST00000542032 RSRP1Q9BUV0 290 aa6.45□□□□□ -1.38
LEMD3-204ENST00000542032 TNKS2Q9H2K2 1166 aa6.45□□□□□ -1.38
LEMD3-204ENST00000542032 TLR6Q9Y2C9 796 aa6.45□□□□□ -1.38
LEMD3-204ENST00000542032 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.45□□□□□ -1.38
LEMD3-204ENST00000542032 SLITRK5O94991 958 aa6.44□□□□□ -1.38
LEMD3-204ENST00000542032 TSNAXIP1Q2TAA8 658 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms