RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 CCDC183Q5T5S1 534 aa17.82■□□□□ 0.44
CLPTM1-202ENST00000541297 NSUN7Q8NE18 718 aaKnown RBP17.82■□□□□ 0.44
CLPTM1-202ENST00000541297 IGDCC4Q8TDY8 1250 aa17.82■□□□□ 0.44
CLPTM1-202ENST00000541297 ATP8A2Q9NTI2 1148 aa17.82■□□□□ 0.44
CLPTM1-202ENST00000541297 MCM9Q9NXL9 1143 aa17.82■□□□□ 0.44
CLPTM1-202ENST00000541297 MTMR6Q9Y217 621 aa17.82■□□□□ 0.44
CLPTM1-202ENST00000541297 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
CLPTM1-202ENST00000541297 IFIT3O14879 490 aaKnown RBP17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 BAG3O95817 575 aa17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 LDHCP07864 332 aa17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 USP17L8P0C7I0 530 aa17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 CERS5Q8N5B7 392 aa17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 RNF41Q9H4P4 317 aaPredicted RBP17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 ANAPC4Q9UJX5 808 aa17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 HPS5Q9UPZ3 1129 aa17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 FOSBP53539 338 aa17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 GIMAP6Q6P9H5 292 aa17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 NFXL1Q6ZNB6 911 aa17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 CDC37L1Q7L3B6 337 aa17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 SLC16A10Q8TF71 515 aa17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 TGFBRAP1Q8WUH2 860 aa17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 DLEC1Q9Y238 1755 aa17.81■□□□□ 0.44
CLPTM1-202ENST00000541297 PTPDC1A2A3K4 754 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 F13A1P00488 732 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 TMED8Q6PL24 325 aaPredicted RBP17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 CCDC125Q86Z20 511 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 CCDC144CPQ8IYA2 1237 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 TMEM87AQ8NBN3 555 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 C7orf43Q8WVR3 580 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 TMEM87BQ96K49 555 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 MYL10Q9BUA6 226 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 LY9Q9HBG7 655 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 SCN9AQ15858 1988 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 NAV1Q8NEY1 1877 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 FERMT3Q86UX7 667 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 SMAP1Q8IYB5 467 aaPredicted RBP17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 CCDC94Q9BW85 323 aaPredicted RBP17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 PRDM10Q9NQV6 1147 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 ADAMTSL1Q8N6G6 1762 aa17.8■□□□□ 0.44
CLPTM1-202ENST00000541297 DPEP1P16444 411 aa17.79■□□□□ 0.44
CLPTM1-202ENST00000541297 AOC3Q16853 763 aa17.79■□□□□ 0.44
CLPTM1-202ENST00000541297 MICU3Q86XE3 530 aa17.79■□□□□ 0.44
CLPTM1-202ENST00000541297 SMARCC2Q8TAQ2 1214 aa17.79■□□□□ 0.44
CLPTM1-202ENST00000541297 PRIMPOLQ96LW4 560 aa17.79■□□□□ 0.44
CLPTM1-202ENST00000541297 RANBP6O60518 1105 aaKnown RBP17.79■□□□□ 0.44
CLPTM1-202ENST00000541297 MAPKAPK5Q8IW41 473 aa17.79■□□□□ 0.44
CLPTM1-202ENST00000541297 ZNF710Q8N1W2 664 aa17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 LLPHQ9BRT6 129 aaKnown RBP17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 ARPP21Q9UBL0 812 aaPredicted RBP17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 TTF2Q9UNY4 1162 aaKnown RBP17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 PDCP20941 246 aa17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 SCNN1DP51172 638 aa17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 PPP4CP60510 307 aa17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 APOA5Q6Q788 366 aa17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 TTLL6Q8N841 843 aa17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 ESR2Q92731 530 aa17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 SAP30BPQ9UHR5 308 aaKnown RBP17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 GPR75-ASB3A0A0A6YYF3 556 aa17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 ECE2O60344 883 aa17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 MKRN1Q9UHC7 482 aaKnown RBP17.78■□□□□ 0.44
CLPTM1-202ENST00000541297 KCNA3P22001 575 aa17.77■□□□□ 0.44
CLPTM1-202ENST00000541297 R3HDM1Q15032 1099 aaKnown RBP17.77■□□□□ 0.44
CLPTM1-202ENST00000541297 TEX11Q8IYF3 940 aa17.77■□□□□ 0.44
CLPTM1-202ENST00000541297 UBAC1Q9BSL1 405 aa17.77■□□□□ 0.44
CLPTM1-202ENST00000541297 ERICH2A1L162 156 aa17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 CCDC69A6NI79 296 aa17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 IGSF3O75054 1194 aa17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 LETM1O95202 739 aaPredicted RBP17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 METAP2P50579 478 aaKnown RBP eCLIP17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 UBE2HP62256 183 aa17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 HMGN5P82970 282 aaKnown RBP17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 PLCB2Q00722 1185 aa17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 WTAPQ15007 396 aa17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 SART3Q15020 963 aaKnown RBP17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 PODNQ7Z5L7 613 aa17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 PPP1R1BQ9UD71 204 aaPredicted RBP17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 DAGLAQ9Y4D2 1042 aa17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 SRCAPQ6ZRS2 3230 aa17.77■□□□□ 0.43
CLPTM1-202ENST00000541297 CPLX1O14810 134 aa17.76■□□□□ 0.43
CLPTM1-202ENST00000541297 ADD1P35611 737 aaKnown RBP17.76■□□□□ 0.43
CLPTM1-202ENST00000541297 SLF2Q8IX21 1173 aa17.76■□□□□ 0.43
CLPTM1-202ENST00000541297 MYH1P12882 1939 aa17.76■□□□□ 0.43
CLPTM1-202ENST00000541297 ZBTB43O43298 467 aa17.76■□□□□ 0.43
CLPTM1-202ENST00000541297 FIBPO43427 364 aa17.76■□□□□ 0.43
CLPTM1-202ENST00000541297 LIFRP42702 1097 aa17.76■□□□□ 0.43
CLPTM1-202ENST00000541297 FAM47AQ5JRC9 791 aa17.76■□□□□ 0.43
CLPTM1-202ENST00000541297 ILDR1Q86SU0 546 aaPredicted RBP17.76■□□□□ 0.43
CLPTM1-202ENST00000541297 SGMS1Q86VZ5 419 aa17.76■□□□□ 0.43
CLPTM1-202ENST00000541297 DYNLL2Q96FJ2 89 aa17.76■□□□□ 0.43
CLPTM1-202ENST00000541297 TAOK2Q9UL54 1235 aa17.76■□□□□ 0.43
CLPTM1-202ENST00000541297 SLC12A7Q9Y666 1083 aa17.76■□□□□ 0.43
CLPTM1-202ENST00000541297 SNED1Q8TER0 1413 aa17.75■□□□□ 0.43
CLPTM1-202ENST00000541297 KIF13BQ9NQT8 1826 aa17.75■□□□□ 0.43
CLPTM1-202ENST00000541297 GAKO14976 1311 aa17.75■□□□□ 0.43
CLPTM1-202ENST00000541297 TNKSO95271 1327 aa17.75■□□□□ 0.43
CLPTM1-202ENST00000541297 H3BQV1 296 aa17.75■□□□□ 0.43
CLPTM1-202ENST00000541297 CDC27P30260 824 aa17.75■□□□□ 0.43
CLPTM1-202ENST00000541297 GTF2F1P35269 517 aaKnown RBP eCLIP17.75■□□□□ 0.43
CLPTM1-202ENST00000541297 RHBDL3P58872 404 aa17.75■□□□□ 0.43
CLPTM1-202ENST00000541297 SBK1Q52WX2 424 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms