RNA–Protein interactions for RNA: ENST00000540667.5

PTMS-204, Transcript of parathymosin, humanhuman

TSL 2

Gene PTMS, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-204ENST00000540667 SOCS4Q8WXH5 440 aa17.04■□□□□ 0.32
PTMS-204ENST00000540667 BADQ92934 168 aa17.04■□□□□ 0.32
PTMS-204ENST00000540667 NUDT12Q9BQG2 462 aa17.04■□□□□ 0.32
PTMS-204ENST00000540667 ZBED9Q6R2W3 1325 aa17.03■□□□□ 0.32
PTMS-204ENST00000540667 TCF20Q9UGU0 1960 aaKnown RBP17.03■□□□□ 0.32
PTMS-204ENST00000540667 TRIM75PA6NK02 468 aa17.03■□□□□ 0.32
PTMS-204ENST00000540667 ZKSCAN1P17029 563 aaPredicted RBP17.03■□□□□ 0.32
PTMS-204ENST00000540667 ATN1P54259 1190 aaPredicted RBP17.03■□□□□ 0.32
PTMS-204ENST00000540667 NFIAQ12857 509 aa17.03■□□□□ 0.32
PTMS-204ENST00000540667 ALYREFQ86V81 257 aaKnown RBP17.03■□□□□ 0.32
PTMS-204ENST00000540667 ZNF594Q96JF6 807 aaPredicted RBP17.03■□□□□ 0.32
PTMS-204ENST00000540667 CNNM1Q9NRU3 951 aa17.03■□□□□ 0.32
PTMS-204ENST00000540667 MORF4L1Q9UBU8 362 aa17.03■□□□□ 0.32
PTMS-204ENST00000540667 MAP3K10Q02779 954 aa17.02■□□□□ 0.32
PTMS-204ENST00000540667 PDE3AQ14432 1141 aa17.02■□□□□ 0.32
PTMS-204ENST00000540667 MRPL50Q8N5N7 158 aaKnown RBP17.02■□□□□ 0.32
PTMS-204ENST00000540667 IL27Q8NEV9 243 aa17.02■□□□□ 0.32
PTMS-204ENST00000540667 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.32
PTMS-204ENST00000540667 SSH1Q8WYL5 1049 aa17.02■□□□□ 0.32
PTMS-204ENST00000540667 ZNF576Q9H609 170 aa17.02■□□□□ 0.32
PTMS-204ENST00000540667 FAM198AQ9UFP1 575 aa17.02■□□□□ 0.32
PTMS-204ENST00000540667 IQSEC3Q9UPP2 1182 aaPredicted RBP17.02■□□□□ 0.32
PTMS-204ENST00000540667 DNAJB2P25686 324 aa17.01■□□□□ 0.31
PTMS-204ENST00000540667 ALDH1L2Q3SY69 923 aa17.01■□□□□ 0.31
PTMS-204ENST00000540667 CDC42EP5Q6NZY7 148 aa17.01■□□□□ 0.31
PTMS-204ENST00000540667 VPS37DQ86XT2 251 aa17.01■□□□□ 0.31
PTMS-204ENST00000540667 USP6NLQ92738 828 aa17.01■□□□□ 0.31
PTMS-204ENST00000540667 CHMP3Q9Y3E7 222 aa17.01■□□□□ 0.31
PTMS-204ENST00000540667 MYH13Q9UKX3 1938 aa17■□□□□ 0.31
PTMS-204ENST00000540667 REV3LO60673 3130 aa17■□□□□ 0.31
PTMS-204ENST00000540667 DNM1LO00429 736 aa17■□□□□ 0.31
PTMS-204ENST00000540667 CTNND1O60716 968 aaKnown RBP17■□□□□ 0.31
PTMS-204ENST00000540667 PABPC4Q13310 644 aaKnown RBP eCLIP17■□□□□ 0.311e-17■■■■□ 20.9
PTMS-204ENST00000540667 POTEEQ6S8J3 1075 aa17■□□□□ 0.31
PTMS-204ENST00000540667 PPM1EQ8WY54 764 aa17■□□□□ 0.31
PTMS-204ENST00000540667 RNPC3Q96LT9 517 aaKnown RBP17■□□□□ 0.31
PTMS-204ENST00000540667 GAS2L1Q99501 681 aaPredicted RBP17■□□□□ 0.31
PTMS-204ENST00000540667 ATP11BQ9Y2G3 1177 aa17■□□□□ 0.31
PTMS-204ENST00000540667 F6X3S4 739 aa16.99■□□□□ 0.31
PTMS-204ENST00000540667 FRAT2O75474 233 aaPredicted RBP16.99■□□□□ 0.31
PTMS-204ENST00000540667 CCDC57Q2TAC2 916 aa16.99■□□□□ 0.31
PTMS-204ENST00000540667 TAF7LQ5H9L4 462 aa16.99■□□□□ 0.31
PTMS-204ENST00000540667 ZFPM1Q8IX07 1006 aa16.99■□□□□ 0.31
PTMS-204ENST00000540667 LPAR1Q92633 364 aa16.99■□□□□ 0.31
PTMS-204ENST00000540667 ASCC2Q9H1I8 757 aaPredicted RBP16.99■□□□□ 0.31
PTMS-204ENST00000540667 PRDM5Q9NQX1 630 aaPredicted RBP16.99■□□□□ 0.31
PTMS-204ENST00000540667 SMC4Q9NTJ3 1288 aa16.99■□□□□ 0.31
PTMS-204ENST00000540667 LRRFIP2Q9Y608 721 aaKnown RBP16.99■□□□□ 0.31
PTMS-204ENST00000540667 CACNA1FO60840 1977 aa16.98■□□□□ 0.31
PTMS-204ENST00000540667 MUC6Q6W4X9 2439 aa16.98■□□□□ 0.31
PTMS-204ENST00000540667 CCL14Q16627 93 aa16.98■□□□□ 0.31
PTMS-204ENST00000540667 LMBR1LQ6UX01 489 aa16.98■□□□□ 0.31
PTMS-204ENST00000540667 LINS1Q8NG48 757 aa16.98■□□□□ 0.31
PTMS-204ENST00000540667 NECAB3Q96P71 396 aaPredicted RBP16.98■□□□□ 0.31
PTMS-204ENST00000540667 PDLIM7Q9NR12 457 aa16.98■□□□□ 0.31
PTMS-204ENST00000540667 DAGLAQ9Y4D2 1042 aa16.98■□□□□ 0.31
PTMS-204ENST00000540667 CHD9Q3L8U1 2897 aa16.98■□□□□ 0.31
PTMS-204ENST00000540667 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.97■□□□□ 0.31
PTMS-204ENST00000540667 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.97■□□□□ 0.31
PTMS-204ENST00000540667 MSCO60682 206 aa16.97■□□□□ 0.31
PTMS-204ENST00000540667 BMP1P13497 986 aa16.97■□□□□ 0.31
PTMS-204ENST00000540667 RGS2P41220 211 aa16.97■□□□□ 0.31
PTMS-204ENST00000540667 SNX17Q15036 470 aa16.97■□□□□ 0.31
PTMS-204ENST00000540667 CAVIN4Q5BKX8 364 aa16.97■□□□□ 0.31
PTMS-204ENST00000540667 TMEM31Q5JXX7 168 aa16.97■□□□□ 0.31
PTMS-204ENST00000540667 SLC39A5Q6ZMH5 540 aa16.97■□□□□ 0.31
PTMS-204ENST00000540667 EPHX3Q9H6B9 360 aa16.97■□□□□ 0.31
PTMS-204ENST00000540667 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.97■□□□□ 0.31
PTMS-204ENST00000540667 DDX20Q9UHI6 824 aaKnown RBP16.97■□□□□ 0.31
PTMS-204ENST00000540667 ATAD5Q96QE3 1844 aa16.97■□□□□ 0.31
PTMS-204ENST00000540667 PTPRCP08575 1304 aa16.96■□□□□ 0.31
PTMS-204ENST00000540667 RARSP54136 660 aaKnown RBP16.96■□□□□ 0.31
PTMS-204ENST00000540667 MORN1Q5T089 497 aa16.96■□□□□ 0.31
PTMS-204ENST00000540667 SLC4A10Q6U841 1118 aa16.96■□□□□ 0.31
PTMS-204ENST00000540667 CCDC84Q86UT8 332 aaPredicted RBP16.96■□□□□ 0.31
PTMS-204ENST00000540667 TIFAQ96CG3 184 aa16.96■□□□□ 0.31
PTMS-204ENST00000540667 APBA2Q99767 749 aa16.96■□□□□ 0.31
PTMS-204ENST00000540667 TRIM43BA6NCK2 446 aa16.95■□□□□ 0.3
PTMS-204ENST00000540667 MAPK4P31152 587 aa16.95■□□□□ 0.3
PTMS-204ENST00000540667 BEND3Q5T5X7 828 aa16.95■□□□□ 0.3
PTMS-204ENST00000540667 SH3RF1Q7Z6J0 888 aa16.95■□□□□ 0.3
PTMS-204ENST00000540667 TRIM43Q96BQ3 446 aaPredicted RBP16.95■□□□□ 0.3
PTMS-204ENST00000540667 CXXC1Q9P0U4 656 aaPredicted RBP16.95■□□□□ 0.3
PTMS-204ENST00000540667 PLXNA1Q9UIW2 1896 aa16.95■□□□□ 0.3
PTMS-204ENST00000540667 MROH5Q6ZUA9 1318 aa16.95■□□□□ 0.3
PTMS-204ENST00000540667 ENTPD3O75355 529 aa16.94■□□□□ 0.3
PTMS-204ENST00000540667 EPHB4P54760 987 aa16.94■□□□□ 0.3
PTMS-204ENST00000540667 EPHA10Q5JZY3 1008 aa16.94■□□□□ 0.3
PTMS-204ENST00000540667 GPRC5AQ8NFJ5 357 aa16.94■□□□□ 0.3
PTMS-204ENST00000540667 IDI2Q9BXS1 227 aa16.94■□□□□ 0.3
PTMS-204ENST00000540667 USP40Q9NVE5 1235 aa16.94■□□□□ 0.3
PTMS-204ENST00000540667 GPR37L1O60883 481 aa16.93■□□□□ 0.3
PTMS-204ENST00000540667 HMGCS2P54868 508 aa16.93■□□□□ 0.3
PTMS-204ENST00000540667 SPP2Q13103 211 aa16.93■□□□□ 0.3
PTMS-204ENST00000540667 TRIM60Q495X7 471 aa16.93■□□□□ 0.3
PTMS-204ENST00000540667 SH3D19Q5HYK7 790 aa16.93■□□□□ 0.3
PTMS-204ENST00000540667 C1orf53Q5VUE5 145 aa16.93■□□□□ 0.3
PTMS-204ENST00000540667 SH3BP5LQ7L8J4 393 aa16.93■□□□□ 0.3
PTMS-204ENST00000540667 ZNF280CQ8ND82 737 aa16.93■□□□□ 0.3
PTMS-204ENST00000540667 P2RX7Q99572 595 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms