RNA–Protein interactions for RNA: ENST00000535286.5

TDRD3-208, Transcript of tudor domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDRD3, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-208ENST00000535286 ZBTB7AO95365 584 aa12.15□□□□□ -0.46
TDRD3-208ENST00000535286 CTDNEP1O95476 244 aa12.15□□□□□ -0.46
TDRD3-208ENST00000535286 CALM1P0DP23 149 aa12.15□□□□□ -0.46
TDRD3-208ENST00000535286 CALM2P0DP24 149 aa12.15□□□□□ -0.46
TDRD3-208ENST00000535286 CALM3P0DP25 149 aa12.15□□□□□ -0.46
TDRD3-208ENST00000535286 KCNA3P22001 575 aa12.15□□□□□ -0.46
TDRD3-208ENST00000535286 RHBDL3P58872 404 aa12.15□□□□□ -0.46
TDRD3-208ENST00000535286 CERS5Q8N5B7 392 aa12.15□□□□□ -0.46
TDRD3-208ENST00000535286 NCOA5Q9HCD5 579 aaKnown RBP12.15□□□□□ -0.46
TDRD3-208ENST00000535286 MYO3BQ8WXR4 1341 aa12.15□□□□□ -0.46
TDRD3-208ENST00000535286 CYP2D7A0A087X1C5 515 aa12.15□□□□□ -0.47
TDRD3-208ENST00000535286 GOLGA8AA7E2F4 631 aa12.15□□□□□ -0.47
TDRD3-208ENST00000535286 USP17L8P0C7I0 530 aa12.15□□□□□ -0.47
TDRD3-208ENST00000535286 AOC3Q16853 763 aa12.15□□□□□ -0.47
TDRD3-208ENST00000535286 DACT2Q5SW24 774 aa12.15□□□□□ -0.47
TDRD3-208ENST00000535286 DDX11Q96FC9 970 aa12.15□□□□□ -0.47
TDRD3-208ENST00000535286 TAOK2Q9UL54 1235 aa12.15□□□□□ -0.47
TDRD3-208ENST00000535286 TNKSO95271 1327 aa12.15□□□□□ -0.47
TDRD3-208ENST00000535286 NCLP19338 710 aaKnown RBP12.14□□□□□ -0.47
TDRD3-208ENST00000535286 SEC23AQ15436 765 aa12.14□□□□□ -0.47
TDRD3-208ENST00000535286 MKNK2Q9HBH9 465 aa12.14□□□□□ -0.47
TDRD3-208ENST00000535286 FLT1P17948 1338 aa12.14□□□□□ -0.47
TDRD3-208ENST00000535286 IFIT1BQ5T764 474 aaKnown RBP12.14□□□□□ -0.47
TDRD3-208ENST00000535286 CATIPQ7Z7H3 387 aa12.14□□□□□ -0.47
TDRD3-208ENST00000535286 TTC6Q86TZ1 520 aa12.14□□□□□ -0.47
TDRD3-208ENST00000535286 MICU3Q86XE3 530 aa12.14□□□□□ -0.47
TDRD3-208ENST00000535286 MAPKAPK5Q8IW41 473 aa12.14□□□□□ -0.47
TDRD3-208ENST00000535286 STK11IPQ8N1F8 1099 aa12.14□□□□□ -0.47
TDRD3-208ENST00000535286 WASF1Q92558 559 aa12.14□□□□□ -0.47
TDRD3-208ENST00000535286 ZDHHC15Q96MV8 337 aa12.14□□□□□ -0.47
TDRD3-208ENST00000535286 CD2APQ9Y5K6 639 aa12.14□□□□□ -0.47
TDRD3-208ENST00000535286 MYH1P12882 1939 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 DDX60LQ5H9U9 1706 aaKnown RBP12.13□□□□□ -0.47
TDRD3-208ENST00000535286 PSME4Q14997 1843 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 TSPY2A6NKD2 308 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 MBD3O95983 291 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 KLHL40Q2TBA0 621 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 DALRD3Q5D0E6 543 aaKnown RBP12.13□□□□□ -0.47
TDRD3-208ENST00000535286 ZNF654Q8IZM8 581 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 ZNF444Q8N0Y2 327 aaPredicted RBP12.13□□□□□ -0.47
TDRD3-208ENST00000535286 TMEM87AQ8NBN3 555 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 LMBRD1Q9NUN5 540 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 ORC3Q9UBD5 711 aaPredicted RBP12.13□□□□□ -0.47
TDRD3-208ENST00000535286 SERPINA10Q9UK55 444 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
TDRD3-208ENST00000535286 DDX49Q9Y6V7 483 aaKnown RBP12.13□□□□□ -0.47
TDRD3-208ENST00000535286 F8W031 263 aaPredicted RBP12.13□□□□□ -0.47
TDRD3-208ENST00000535286 CYP2D6P10635 497 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 CRKP46108 304 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 RTN1Q16799 776 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 UPF1Q92900 1129 aaKnown RBP eCLIP12.13□□□□□ -0.47
TDRD3-208ENST00000535286 ZKSCAN3Q9BRR0 538 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 TCP11L1Q9NUJ3 509 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 USP40Q9NVE5 1235 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 STK36Q9NRP7 1315 aa12.13□□□□□ -0.47
TDRD3-208ENST00000535286 PRPF40AO75400 957 aaKnown RBP12.12□□□□□ -0.47
TDRD3-208ENST00000535286 PRDM1O75626 825 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 DDAH1O94760 285 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 IARSP41252 1262 aaKnown RBP12.12□□□□□ -0.47
TDRD3-208ENST00000535286 KRT85P78386 507 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 GSE1Q14687 1217 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
TDRD3-208ENST00000535286 ATL3Q6DD88 541 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 CDC37L1Q7L3B6 337 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 DGKHQ86XP1 1220 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 TRIM22Q8IYM9 498 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 ENAHQ8N8S7 591 aaPredicted RBP12.12□□□□□ -0.47
TDRD3-208ENST00000535286 NKX2-3Q8TAU0 364 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 RBM28Q9NW13 759 aaKnown RBP12.12□□□□□ -0.47
TDRD3-208ENST00000535286 ZNF646O15015 1829 aaPredicted RBP12.12□□□□□ -0.47
TDRD3-208ENST00000535286 NPM3O75607 178 aaKnown RBP12.12□□□□□ -0.47
TDRD3-208ENST00000535286 IFNAR1P17181 557 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 C16orf86Q6ZW13 317 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 ILDR1Q86SU0 546 aaPredicted RBP12.12□□□□□ -0.47
TDRD3-208ENST00000535286 LARGE2Q8N3Y3 721 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 FANCBQ8NB91 859 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 C8orf76Q96K31 380 aa12.12□□□□□ -0.47
TDRD3-208ENST00000535286 SCN9AQ15858 1988 aa12.11□□□□□ -0.47
TDRD3-208ENST00000535286 ECM29Q5VYK3 1845 aa12.11□□□□□ -0.47
TDRD3-208ENST00000535286 SSRP1Q08945 709 aaKnown RBP12.11□□□□□ -0.47
TDRD3-208ENST00000535286 ANKS1AQ92625 1134 aa12.11□□□□□ -0.47
TDRD3-208ENST00000535286 TSPY3P0CV98 308 aa12.11□□□□□ -0.47
TDRD3-208ENST00000535286 TSPY8P0CW00 308 aa12.11□□□□□ -0.47
TDRD3-208ENST00000535286 FDPSP14324 419 aaKnown RBP12.11□□□□□ -0.47
TDRD3-208ENST00000535286 ADD1P35611 737 aaKnown RBP12.11□□□□□ -0.47
TDRD3-208ENST00000535286 SCNN1DP51172 638 aa12.11□□□□□ -0.47
TDRD3-208ENST00000535286 TFAP4Q01664 338 aa12.11□□□□□ -0.47
TDRD3-208ENST00000535286 KIAA0825Q8IV33 1275 aa12.11□□□□□ -0.47
TDRD3-208ENST00000535286 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
TDRD3-208ENST00000535286 SCAND2PQ9GZW5 306 aaPredicted RBP12.11□□□□□ -0.47
TDRD3-208ENST00000535286 SENP2Q9HC62 589 aa12.11□□□□□ -0.47
TDRD3-208ENST00000535286 SWAP70Q9UH65 585 aa12.11□□□□□ -0.47
TDRD3-208ENST00000535286 SAP30BPQ9UHR5 308 aaKnown RBP12.11□□□□□ -0.47
TDRD3-208ENST00000535286 HLA-DOAP06340 250 aa12.1□□□□□ -0.47
TDRD3-208ENST00000535286 MMP14P50281 582 aa12.1□□□□□ -0.47
TDRD3-208ENST00000535286 NTRK3Q16288 839 aa12.1□□□□□ -0.47
TDRD3-208ENST00000535286 APOBEC3HQ6NTF7 200 aaKnown RBP12.1□□□□□ -0.47
TDRD3-208ENST00000535286 CDC42EP5Q6NZY7 148 aa12.1□□□□□ -0.47
TDRD3-208ENST00000535286 NIM1KQ8IY84 436 aa12.1□□□□□ -0.47
TDRD3-208ENST00000535286 MXD3Q9BW11 206 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms