RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SKOR2Q2VWA4 1001 aaPredicted RBP14.55□□□□□ -0.08
SCARB1-204ENST00000535005 EHD4Q9H223 541 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 PALD1Q9ULE6 856 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 PPP2R3BQ9Y5P8 575 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 ROBO3Q96MS0 1386 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 CYP2D7A0A087X1C5 515 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 DDTLA6NHG4 134 aaPredicted RBP14.55□□□□□ -0.08
SCARB1-204ENST00000535005 MINDY4BA8MYZ0 360 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 FGRP09769 529 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 CYP2D6P10635 497 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 PLCD1P51178 756 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 METTL16Q86W50 562 aaKnown RBP14.55□□□□□ -0.08
SCARB1-204ENST00000535005 RASEFQ8IZ41 740 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 SNX21Q969T3 373 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 NBPF3Q9H094 633 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 DEFB129Q9H1M3 183 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 PI4KBQ9UBF8 816 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 SNX14Q9Y5W7 946 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 BAZ2AQ9UIF9 1905 aaKnown RBP14.54□□□□□ -0.08
SCARB1-204ENST00000535005 HLA-DOAP06340 250 aa14.54□□□□□ -0.08
SCARB1-204ENST00000535005 PCP11498 1178 aaKnown RBP14.54□□□□□ -0.08
SCARB1-204ENST00000535005 HAND2P61296 217 aa14.54□□□□□ -0.08
SCARB1-204ENST00000535005 KRT32Q14532 448 aa14.54□□□□□ -0.08
SCARB1-204ENST00000535005 FOXP4Q8IVH2 680 aaPredicted RBP14.54□□□□□ -0.08
SCARB1-204ENST00000535005 HSCBQ8IWL3 235 aa14.54□□□□□ -0.08
SCARB1-204ENST00000535005 DCPSQ96C86 337 aaKnown RBP14.54□□□□□ -0.08
SCARB1-204ENST00000535005 TEPSINQ96N21 525 aa14.54□□□□□ -0.08
SCARB1-204ENST00000535005 NMRK2Q9NPI5 230 aa14.54□□□□□ -0.08
SCARB1-204ENST00000535005 MYH1P12882 1939 aa14.53□□□□□ -0.08
SCARB1-204ENST00000535005 SLC3A2P08195 630 aaKnown RBP14.53□□□□□ -0.08
SCARB1-204ENST00000535005 NT5C2P49902 561 aa14.53□□□□□ -0.08
SCARB1-204ENST00000535005 GABPAQ06546 454 aa14.53□□□□□ -0.08
SCARB1-204ENST00000535005 EAPPQ56P03 285 aaPredicted RBP14.53□□□□□ -0.08
SCARB1-204ENST00000535005 AKNAD1Q5T1N1 836 aa14.53□□□□□ -0.08
SCARB1-204ENST00000535005 STAG1Q8WVM7 1258 aa14.53□□□□□ -0.08
SCARB1-204ENST00000535005 TMEM39BQ9GZU3 492 aa14.53□□□□□ -0.08
SCARB1-204ENST00000535005 RNF41Q9H4P4 317 aaPredicted RBP14.53□□□□□ -0.08
SCARB1-204ENST00000535005 TAF6LQ9Y6J9 622 aa14.53□□□□□ -0.08
SCARB1-204ENST00000535005 LAMA4Q16363 1823 aa14.53□□□□□ -0.08
SCARB1-204ENST00000535005 SMIM22K7EJ46 135 aa14.52□□□□□ -0.08
SCARB1-204ENST00000535005 MAP3K10Q02779 954 aa14.52□□□□□ -0.08
SCARB1-204ENST00000535005 EVX2Q03828 476 aa14.52□□□□□ -0.08
SCARB1-204ENST00000535005 CTDSPL2Q05D32 466 aa14.52□□□□□ -0.08
SCARB1-204ENST00000535005 C16orf86Q6ZW13 317 aa14.52□□□□□ -0.08
SCARB1-204ENST00000535005 TBC1D10CQ8IV04 446 aa14.52□□□□□ -0.08
SCARB1-204ENST00000535005 ZSCAN29Q8IWY8 852 aaPredicted RBP14.52□□□□□ -0.08
SCARB1-204ENST00000535005 NAP1L5Q96NT1 182 aaPredicted RBP14.52□□□□□ -0.08
SCARB1-204ENST00000535005 SERPINB13Q9UIV8 391 aa14.52□□□□□ -0.08
SCARB1-204ENST00000535005 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.52□□□□□ -0.081e-7■■■■□ 24.4
SCARB1-204ENST00000535005 E7EWF7 191 aa14.52□□□□□ -0.09
SCARB1-204ENST00000535005 TBC1D12O60347 775 aa14.52□□□□□ -0.09
SCARB1-204ENST00000535005 TPM2P07951 284 aa14.52□□□□□ -0.09
SCARB1-204ENST00000535005 LDHDQ86WU2 507 aa14.52□□□□□ -0.09
SCARB1-204ENST00000535005 SULF1Q8IWU6 871 aa14.52□□□□□ -0.09
SCARB1-204ENST00000535005 CSRNP1Q96S65 589 aa14.52□□□□□ -0.09
SCARB1-204ENST00000535005 TM6SF1Q9BZW5 370 aa14.52□□□□□ -0.09
SCARB1-204ENST00000535005 GRPEL1Q9HAV7 217 aa14.52□□□□□ -0.09
SCARB1-204ENST00000535005 SWAP70Q9UH65 585 aa14.52□□□□□ -0.09
SCARB1-204ENST00000535005 HERC5Q9UII4 1024 aaKnown RBP14.52□□□□□ -0.09
SCARB1-204ENST00000535005 TACC3Q9Y6A5 838 aa14.52□□□□□ -0.09
SCARB1-204ENST00000535005 LAMB1P07942 1786 aa14.51□□□□□ -0.09
SCARB1-204ENST00000535005 ORC4O43929 436 aa14.51□□□□□ -0.09
SCARB1-204ENST00000535005 DDIT3P35638 169 aa14.51□□□□□ -0.09
SCARB1-204ENST00000535005 PDE4BQ07343 736 aa14.51□□□□□ -0.09
SCARB1-204ENST00000535005 MFSD6Q6ZSS7 791 aa14.51□□□□□ -0.09
SCARB1-204ENST00000535005 STOX1Q6ZVD7 989 aa14.51□□□□□ -0.09
SCARB1-204ENST00000535005 ZNF526Q8TF50 670 aaPredicted RBP14.51□□□□□ -0.09
SCARB1-204ENST00000535005 HOOK2Q96ED9 719 aa14.51□□□□□ -0.09
SCARB1-204ENST00000535005 KIF2CQ99661 725 aa14.51□□□□□ -0.09
SCARB1-204ENST00000535005 ZNF287Q9HBT7 754 aa14.51□□□□□ -0.09
SCARB1-204ENST00000535005 CDC37L1Q7L3B6 337 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 KRT26Q7Z3Y9 468 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 DYNLL2Q96FJ2 89 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 GBP4Q96PP9 640 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 CNNM2Q9H8M5 875 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 ESPNB1AK53 854 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 POTEIP0CG38 1075 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 POTEJP0CG39 1038 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 CDK8P49336 464 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 HSP90AA2PQ14568 343 aaPredicted RBP14.5□□□□□ -0.09
SCARB1-204ENST00000535005 SLC4A8Q2Y0W8 1093 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 ADCK5Q3MIX3 580 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 CDAN1Q8IWY9 1227 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 NEK1Q96PY6 1258 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 KRT23Q9C075 422 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 SCAF8Q9UPN6 1271 aaKnown RBP14.5□□□□□ -0.09
SCARB1-204ENST00000535005 CLEC11AQ9Y240 323 aa14.5□□□□□ -0.09
SCARB1-204ENST00000535005 HMGB1P09429 215 aaKnown RBP14.49□□□□□ -0.09
SCARB1-204ENST00000535005 PSMA5P28066 241 aa14.49□□□□□ -0.09
SCARB1-204ENST00000535005 TRDNQ13061 729 aa14.49□□□□□ -0.09
SCARB1-204ENST00000535005 SUPT20HL1Q3ZLR7 823 aa14.49□□□□□ -0.09
SCARB1-204ENST00000535005 NBPF12Q5TAG4 269 aaPredicted RBP14.49□□□□□ -0.09
SCARB1-204ENST00000535005 TATDN1Q6P1N9 297 aa14.49□□□□□ -0.09
SCARB1-204ENST00000535005 USP48Q86UV5 1035 aa14.49□□□□□ -0.09
SCARB1-204ENST00000535005 CRACR2BQ8N4Y2 399 aaPredicted RBP14.49□□□□□ -0.09
SCARB1-204ENST00000535005 NCOA7Q8NI08 942 aa14.49□□□□□ -0.09
SCARB1-204ENST00000535005 DNAJC18Q9H819 358 aa14.49□□□□□ -0.09
SCARB1-204ENST00000535005 GPBP1L1Q9HC44 474 aaPredicted RBP14.49□□□□□ -0.09
SCARB1-204ENST00000535005 ZSWIM6Q9HCJ5 1215 aa14.49□□□□□ -0.09
SCARB1-204ENST00000535005 POLR2AP24928 1970 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms