RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 TMED8Q6PL24 325 aaPredicted RBP16.89■□□□□ 0.29
VPS11-205ENST00000534551 DCP1AQ9NPI6 582 aaPredicted RBP16.89■□□□□ 0.29
VPS11-205ENST00000534551 SNCAIPQ9Y6H5 919 aa16.89■□□□□ 0.29
VPS11-205ENST00000534551 ZFYP08048 801 aaPredicted RBP16.88■□□□□ 0.29
VPS11-205ENST00000534551 ECE1P42892 770 aa16.88■□□□□ 0.29
VPS11-205ENST00000534551 NMIQ13287 307 aaPredicted RBP16.88■□□□□ 0.29
VPS11-205ENST00000534551 CCDC84Q86UT8 332 aaPredicted RBP16.88■□□□□ 0.29
VPS11-205ENST00000534551 ANKRD13AQ8IZ07 590 aa16.88■□□□□ 0.29
VPS11-205ENST00000534551 EPB41L4AQ9HCS5 686 aaPredicted RBP16.88■□□□□ 0.29
VPS11-205ENST00000534551 SLC4A4Q9Y6R1 1079 aa16.88■□□□□ 0.29
VPS11-205ENST00000534551 PHF20L1A8MW92 1017 aa16.87■□□□□ 0.29
VPS11-205ENST00000534551 FOXP2O15409 715 aa16.87■□□□□ 0.29
VPS11-205ENST00000534551 CERS3Q8IU89 383 aa16.87■□□□□ 0.29
VPS11-205ENST00000534551 WNK4Q96J92 1243 aa16.87■□□□□ 0.29
VPS11-205ENST00000534551 STRBPQ96SI9 672 aaKnown RBP16.87■□□□□ 0.29
VPS11-205ENST00000534551 SDSP20132 328 aa16.86■□□□□ 0.29
VPS11-205ENST00000534551 PLCD1P51178 756 aa16.86■□□□□ 0.29
VPS11-205ENST00000534551 MAP3K9P80192 1104 aa16.86■□□□□ 0.29
VPS11-205ENST00000534551 ZNF589Q86UQ0 364 aaPredicted RBP16.86■□□□□ 0.29
VPS11-205ENST00000534551 JMYQ8N9B5 988 aa16.86■□□□□ 0.29
VPS11-205ENST00000534551 SLC44A5Q8NCS7 719 aa16.86■□□□□ 0.29
VPS11-205ENST00000534551 OPTNQ96CV9 577 aa16.86■□□□□ 0.29
VPS11-205ENST00000534551 IL25Q9H293 177 aa16.86■□□□□ 0.29
VPS11-205ENST00000534551 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.86■□□□□ 0.29
VPS11-205ENST00000534551 MCM9Q9NXL9 1143 aa16.86■□□□□ 0.29
VPS11-205ENST00000534551 CSADQ9Y600 493 aa16.86■□□□□ 0.29
VPS11-205ENST00000534551 JAG1P78504 1218 aa16.85■□□□□ 0.29
VPS11-205ENST00000534551 KIF23Q02241 960 aaPredicted RBP16.85■□□□□ 0.29
VPS11-205ENST00000534551 VPS53Q5VIR6 699 aa16.85■□□□□ 0.29
VPS11-205ENST00000534551 HOOK2Q96ED9 719 aa16.85■□□□□ 0.29
VPS11-205ENST00000534551 OTUD5Q96G74 571 aa16.85■□□□□ 0.29
VPS11-205ENST00000534551 PPP4R2Q9NY27 417 aa16.85■□□□□ 0.29
VPS11-205ENST00000534551 PI4KBQ9UBF8 816 aa16.85■□□□□ 0.29
VPS11-205ENST00000534551 ZNF112Q9UJU3 913 aa16.85■□□□□ 0.29
VPS11-205ENST00000534551 LOC285556D6RIA3 1793 aa16.84■□□□□ 0.29
VPS11-205ENST00000534551 GREB1LQ9C091 1923 aaPredicted RBP16.84■□□□□ 0.29
VPS11-205ENST00000534551 GSG1L2A8MUP6 293 aa16.84■□□□□ 0.29
VPS11-205ENST00000534551 GDF11O95390 407 aa16.84■□□□□ 0.29
VPS11-205ENST00000534551 POLR3DP05423 398 aaPredicted RBP16.84■□□□□ 0.29
VPS11-205ENST00000534551 HLA-DOAP06340 250 aa16.84■□□□□ 0.29
VPS11-205ENST00000534551 MAP3K10Q02779 954 aa16.84■□□□□ 0.29
VPS11-205ENST00000534551 NOGQ13253 232 aa16.84■□□□□ 0.29
VPS11-205ENST00000534551 SPRYD7Q5W111 196 aa16.84■□□□□ 0.29
VPS11-205ENST00000534551 CRACR2BQ8N4Y2 399 aaPredicted RBP16.84■□□□□ 0.29
VPS11-205ENST00000534551 CCDC102AQ96A19 550 aa16.84■□□□□ 0.29
VPS11-205ENST00000534551 SLC10A4Q96EP9 437 aa16.84■□□□□ 0.29
VPS11-205ENST00000534551 DYNLL2Q96FJ2 89 aa16.84■□□□□ 0.29
VPS11-205ENST00000534551 DHX36Q9H2U1 1008 aaKnown RBP16.84■□□□□ 0.29
VPS11-205ENST00000534551 SPDYE5A6NIY4 337 aa16.83■□□□□ 0.28
VPS11-205ENST00000534551 LRRFIP1Q32MZ4 808 aaKnown RBP16.83■□□□□ 0.28
VPS11-205ENST00000534551 STK11IPQ8N1F8 1099 aa16.83■□□□□ 0.28
VPS11-205ENST00000534551 USP17L12C9JPN9 530 aa16.82■□□□□ 0.28
VPS11-205ENST00000534551 USP17L21D6R901 530 aa16.82■□□□□ 0.28
VPS11-205ENST00000534551 TBC1D12O60347 775 aa16.82■□□□□ 0.28
VPS11-205ENST00000534551 HSPA1AP0DMV8 641 aaKnown RBP16.82■□□□□ 0.28
VPS11-205ENST00000534551 HSPA1BP0DMV9 641 aaKnown RBP16.82■□□□□ 0.28
VPS11-205ENST00000534551 NOL9Q5SY16 702 aaKnown RBP16.82■□□□□ 0.28
VPS11-205ENST00000534551 CWC27Q6UX04 472 aaKnown RBP16.82■□□□□ 0.28
VPS11-205ENST00000534551 METTL16Q86W50 562 aaKnown RBP16.82■□□□□ 0.28
VPS11-205ENST00000534551 SCYL3Q8IZE3 742 aa16.82■□□□□ 0.28
VPS11-205ENST00000534551 ATP8A2Q9NTI2 1148 aa16.82■□□□□ 0.28
VPS11-205ENST00000534551 HERC5Q9UII4 1024 aaKnown RBP16.82■□□□□ 0.28
VPS11-205ENST00000534551 TSKSQ9UJT2 592 aa16.82■□□□□ 0.28
VPS11-205ENST00000534551 SHMT1P34896 483 aa16.81■□□□□ 0.28
VPS11-205ENST00000534551 TDO2P48775 406 aa16.81■□□□□ 0.28
VPS11-205ENST00000534551 GABPAQ06546 454 aa16.81■□□□□ 0.28
VPS11-205ENST00000534551 CTR9Q6PD62 1173 aa16.81■□□□□ 0.28
VPS11-205ENST00000534551 TRIM34Q9BYJ4 488 aa16.81■□□□□ 0.28
VPS11-205ENST00000534551 EHD4Q9H223 541 aa16.81■□□□□ 0.28
VPS11-205ENST00000534551 DIAPH3Q9NSV4 1193 aa16.81■□□□□ 0.28
VPS11-205ENST00000534551 SERPINB13Q9UIV8 391 aa16.81■□□□□ 0.28
VPS11-205ENST00000534551 CCDC171Q6TFL3 1326 aa16.8■□□□□ 0.28
VPS11-205ENST00000534551 IRF6O14896 467 aa16.8■□□□□ 0.28
VPS11-205ENST00000534551 APPP05067 770 aa16.8■□□□□ 0.28
VPS11-205ENST00000534551 C12orf60Q5U649 245 aa16.8■□□□□ 0.28
VPS11-205ENST00000534551 TTC6Q86TZ1 520 aa16.8■□□□□ 0.28
VPS11-205ENST00000534551 HELLSQ9NRZ9 838 aa16.8■□□□□ 0.28
VPS11-205ENST00000534551 MYH4Q9Y623 1939 aa16.8■□□□□ 0.28
VPS11-205ENST00000534551 ZBTB48P10074 688 aaPredicted RBP16.79■□□□□ 0.28
VPS11-205ENST00000534551 PTPRAP18433 802 aa16.79■□□□□ 0.28
VPS11-205ENST00000534551 MAP2K2P36507 400 aa16.79■□□□□ 0.28
VPS11-205ENST00000534551 CAP2P40123 477 aa16.79■□□□□ 0.28
VPS11-205ENST00000534551 DGKZQ13574 1117 aa16.79■□□□□ 0.28
VPS11-205ENST00000534551 MCMDC2Q4G0Z9 681 aa16.79■□□□□ 0.28
VPS11-205ENST00000534551 ERICH6BQ5W0A0 696 aa16.79■□□□□ 0.28
VPS11-205ENST00000534551 ERO1BQ86YB8 467 aa16.79■□□□□ 0.28
VPS11-205ENST00000534551 CLEC10AQ8IUN9 316 aa16.79■□□□□ 0.28
VPS11-205ENST00000534551 IFNL3Q8IZI9 196 aa16.79■□□□□ 0.28
VPS11-205ENST00000534551 ARPP21Q9UBL0 812 aaPredicted RBP16.79■□□□□ 0.28
VPS11-205ENST00000534551 ZSWIM8A7E2V4 1837 aa16.79■□□□□ 0.28
VPS11-205ENST00000534551 ROBO3Q96MS0 1386 aa16.78■□□□□ 0.28
VPS11-205ENST00000534551 UNCXA6NJT0 531 aa16.78■□□□□ 0.28
VPS11-205ENST00000534551 MINDY4BA8MYZ0 360 aa16.78■□□□□ 0.28
VPS11-205ENST00000534551 PATL2C9JE40 543 aaKnown RBP16.78■□□□□ 0.28
VPS11-205ENST00000534551 CTNND1O60716 968 aaKnown RBP16.78■□□□□ 0.28
VPS11-205ENST00000534551 GNAT2P19087 354 aa16.78■□□□□ 0.28
VPS11-205ENST00000534551 PPIL2Q13356 520 aa16.78■□□□□ 0.28
VPS11-205ENST00000534551 FOXP4Q8IVH2 680 aaPredicted RBP16.78■□□□□ 0.28
VPS11-205ENST00000534551 DDRGK1Q96HY6 314 aa16.78■□□□□ 0.28
VPS11-205ENST00000534551 MS4A4AQ96JQ5 239 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms