RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 ERICH6Q7L0X2 663 aa26.1■■□□□ 1.77
CHKA-206ENST00000531341 FAM110CQ1W6H9 321 aa26.09■■□□□ 1.77
CHKA-206ENST00000531341 SPTY2D1Q68D10 685 aaPredicted RBP26.09■■□□□ 1.77
CHKA-206ENST00000531341 TRMT2AQ8IZ69 625 aaKnown RBP26.09■■□□□ 1.77
CHKA-206ENST00000531341 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.09■■□□□ 1.772e-6■■■□□ 16.1
CHKA-206ENST00000531341 HMG20BQ9P0W2 317 aa26.09■■□□□ 1.77
CHKA-206ENST00000531341 PROCA1Q8NCQ7 364 aaPredicted RBP26.08■■□□□ 1.77
CHKA-206ENST00000531341 GJD2Q9UKL4 321 aa26.08■■□□□ 1.77
CHKA-206ENST00000531341 DOCK3Q8IZD9 2030 aa26.08■■□□□ 1.77
CHKA-206ENST00000531341 HMGCS2P54868 508 aa26.07■■□□□ 1.76
CHKA-206ENST00000531341 ZNF280CQ8ND82 737 aa26.07■■□□□ 1.76
CHKA-206ENST00000531341 NSUN4Q96CB9 384 aaKnown RBP26.07■■□□□ 1.76
CHKA-206ENST00000531341 OSBPL5Q9H0X9 879 aaPredicted RBP26.07■■□□□ 1.76
CHKA-206ENST00000531341 PNMA3Q9UL41 463 aa26.07■■□□□ 1.76
CHKA-206ENST00000531341 A0A1W2PPC1 479 aa26.06■■□□□ 1.76
CHKA-206ENST00000531341 PEX10O60683 326 aa26.06■■□□□ 1.76
CHKA-206ENST00000531341 NPM3O75607 178 aaKnown RBP26.06■■□□□ 1.76
CHKA-206ENST00000531341 MNX1P50219 401 aaPredicted RBP26.06■■□□□ 1.76
CHKA-206ENST00000531341 NECAB2Q7Z6G3 386 aa26.06■■□□□ 1.76
CHKA-206ENST00000531341 ALPK3Q96L96 1907 aa26.06■■□□□ 1.76
CHKA-206ENST00000531341 MVPQ14764 893 aaKnown RBP26.05■■□□□ 1.76
CHKA-206ENST00000531341 SLC17A8Q8NDX2 589 aa26.05■■□□□ 1.76
CHKA-206ENST00000531341 NEUROD6Q96NK8 337 aa26.05■■□□□ 1.76
CHKA-206ENST00000531341 ASCC2Q9H1I8 757 aaPredicted RBP26.05■■□□□ 1.76
CHKA-206ENST00000531341 SRGAP3O43295 1099 aa26.04■■□□□ 1.76
CHKA-206ENST00000531341 CAPN2P17655 700 aa26.04■■□□□ 1.76
CHKA-206ENST00000531341 CAP2P40123 477 aa26.04■■□□□ 1.76
CHKA-206ENST00000531341 API5Q9BZZ5 524 aaKnown RBP26.04■■□□□ 1.76
CHKA-206ENST00000531341 AKAP2Q9Y2D5 859 aa26.04■■□□□ 1.76
CHKA-206ENST00000531341 GCLCP48506 637 aaPredicted RBP26.03■■□□□ 1.76
CHKA-206ENST00000531341 JAG1P78504 1218 aa26.03■■□□□ 1.76
CHKA-206ENST00000531341 C7orf61Q8IZ16 206 aa26.03■■□□□ 1.76
CHKA-206ENST00000531341 SPATA5Q8NB90 893 aa26.03■■□□□ 1.76
CHKA-206ENST00000531341 GDF15Q99988 308 aa26.03■■□□□ 1.76
CHKA-206ENST00000531341 ZMYND8Q9ULU4 1186 aaPredicted RBP26.03■■□□□ 1.76
CHKA-206ENST00000531341 HMGCRP04035 888 aa26.02■■□□□ 1.76
CHKA-206ENST00000531341 SH3D19Q5HYK7 790 aa26.02■■□□□ 1.76
CHKA-206ENST00000531341 SH3RF3Q8TEJ3 882 aaPredicted RBP26.02■■□□□ 1.76
CHKA-206ENST00000531341 RAI14Q9P0K7 980 aa26.02■■□□□ 1.76
CHKA-206ENST00000531341 LOC285556D6RIA3 1793 aa26.02■■□□□ 1.76
CHKA-206ENST00000531341 DNAH12Q6ZR08 3092 aa26.01■■□□□ 1.75
CHKA-206ENST00000531341 LAMA2P24043 3122 aaKnown RBP26.01■■□□□ 1.75
CHKA-206ENST00000531341 USP17L5A8MUK1 530 aa26.01■■□□□ 1.75
CHKA-206ENST00000531341 DLL1O00548 723 aa26.01■■□□□ 1.75
CHKA-206ENST00000531341 SHROOM1Q2M3G4 852 aaPredicted RBP26.01■■□□□ 1.75
CHKA-206ENST00000531341 RPTORQ8N122 1335 aa26.01■■□□□ 1.75
CHKA-206ENST00000531341 TRIB2Q92519 343 aa26.01■■□□□ 1.75
CHKA-206ENST00000531341 HMX1Q9NP08 348 aaPredicted RBP26.01■■□□□ 1.75
CHKA-206ENST00000531341 HDAC5Q9UQL6 1122 aa26.01■■□□□ 1.75
CHKA-206ENST00000531341 TEX11Q8IYF3 940 aa26■■□□□ 1.75
CHKA-206ENST00000531341 ANKLE1Q8NAG6 615 aa26■■□□□ 1.75
CHKA-206ENST00000531341 COL2A1P02458 1487 aaPredicted RBP25.99■■□□□ 1.75
CHKA-206ENST00000531341 LDHCP07864 332 aa25.99■■□□□ 1.75
CHKA-206ENST00000531341 SYN1P17600 705 aa25.99■■□□□ 1.75
CHKA-206ENST00000531341 ARID4AP29374 1257 aaPredicted RBP25.99■■□□□ 1.75
CHKA-206ENST00000531341 MCAMP43121 646 aa25.99■■□□□ 1.75
CHKA-206ENST00000531341 GSTO1P78417 241 aa25.99■■□□□ 1.75
CHKA-206ENST00000531341 MTX1Q13505 466 aa25.99■■□□□ 1.75
CHKA-206ENST00000531341 P2RX7Q99572 595 aaKnown RBP25.99■■□□□ 1.75
CHKA-206ENST00000531341 PLXNB2O15031 1838 aa25.98■■□□□ 1.75
CHKA-206ENST00000531341 MAP4K4O95819 1239 aaPredicted RBP25.98■■□□□ 1.75
CHKA-206ENST00000531341 CYP2B6P20813 491 aa25.98■■□□□ 1.75
CHKA-206ENST00000531341 BMP8BP34820 402 aa25.98■■□□□ 1.75
CHKA-206ENST00000531341 PABPC4Q13310 644 aaKnown RBP eCLIP25.98■■□□□ 1.75
CHKA-206ENST00000531341 MTMR2Q13614 643 aa25.98■■□□□ 1.75
CHKA-206ENST00000531341 TBC1D2Q9BYX2 928 aa25.98■■□□□ 1.75
CHKA-206ENST00000531341 TXNRD2Q9NNW7 524 aa25.98■■□□□ 1.75
CHKA-206ENST00000531341 MORF4L1Q9UBU8 362 aa25.98■■□□□ 1.75
CHKA-206ENST00000531341 ATAD5Q96QE3 1844 aa25.98■■□□□ 1.75
CHKA-206ENST00000531341 UNC80Q8N2C7 3258 aa25.97■■□□□ 1.75
CHKA-206ENST00000531341 RARSP54136 660 aaKnown RBP25.97■■□□□ 1.75
CHKA-206ENST00000531341 GORABQ5T7V8 394 aa25.97■■□□□ 1.75
CHKA-206ENST00000531341 WDR18Q9BV38 432 aa25.97■■□□□ 1.75
CHKA-206ENST00000531341 NBPF3Q9H094 633 aa25.97■■□□□ 1.75
CHKA-206ENST00000531341 DNAJC18Q9H819 358 aa25.97■■□□□ 1.75
CHKA-206ENST00000531341 TNNQ9UQP3 1299 aa25.97■■□□□ 1.75
CHKA-206ENST00000531341 GNAI3P08754 354 aa25.96■■□□□ 1.75
CHKA-206ENST00000531341 C11orf49Q9H6J7 331 aa25.96■■□□□ 1.75
CHKA-206ENST00000531341 AS3MTQ9HBK9 375 aa25.96■■□□□ 1.75
CHKA-206ENST00000531341 HERC5Q9UII4 1024 aaKnown RBP25.96■■□□□ 1.75
CHKA-206ENST00000531341 OGDHLQ9ULD0 1010 aa25.96■■□□□ 1.75
CHKA-206ENST00000531341 PNMA6EA0A0J9YXQ4 647 aa25.95■■□□□ 1.74
CHKA-206ENST00000531341 CT47B1P0C2W7 299 aaPredicted RBP25.95■■□□□ 1.74
CHKA-206ENST00000531341 BACE1P56817 501 aa25.95■■□□□ 1.74
CHKA-206ENST00000531341 Q3C1V9 767 aa25.95■■□□□ 1.74
CHKA-206ENST00000531341 MAP3K21Q5TCX8 1036 aa25.95■■□□□ 1.74
CHKA-206ENST00000531341 POTEEQ6S8J3 1075 aa25.95■■□□□ 1.74
CHKA-206ENST00000531341 SNRKQ9NRH2 765 aa25.95■■□□□ 1.74
CHKA-206ENST00000531341 AATFQ9NY61 560 aaKnown RBP eCLIP25.95■■□□□ 1.74
CHKA-206ENST00000531341 LRP2BPQ9P2M1 347 aa25.95■■□□□ 1.74
CHKA-206ENST00000531341 PI4KBQ9UBF8 816 aa25.95■■□□□ 1.74
CHKA-206ENST00000531341 SIPA1L1O43166 1804 aa25.95■■□□□ 1.74
CHKA-206ENST00000531341 PFASO15067 1338 aa25.94■■□□□ 1.74
CHKA-206ENST00000531341 Q7L0L9 218 aa25.94■■□□□ 1.74
CHKA-206ENST00000531341 ADGRA1Q86SQ6 560 aa25.94■■□□□ 1.74
CHKA-206ENST00000531341 RBPJLQ9UBG7 517 aa25.94■■□□□ 1.74
CHKA-206ENST00000531341 GDF11O95390 407 aa25.93■■□□□ 1.74
CHKA-206ENST00000531341 PRKAR2AP13861 404 aaKnown RBP25.93■■□□□ 1.74
CHKA-206ENST00000531341 HOXA7P31268 230 aaPredicted RBP25.93■■□□□ 1.74
CHKA-206ENST00000531341 MAGEA10P43363 369 aaPredicted RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms