RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 SLC44A5Q8NCS7 719 aa17.05■□□□□ 0.32
COLCA2-202ENST00000526216 LARP6Q9BRS8 491 aaKnown RBP17.05■□□□□ 0.32
COLCA2-202ENST00000526216 GPHNQ9NQX3 736 aaPredicted RBP17.05■□□□□ 0.32
COLCA2-202ENST00000526216 UTRNP46939 3433 aa17.04■□□□□ 0.32
COLCA2-202ENST00000526216 COL2A1P02458 1487 aaPredicted RBP17.04■□□□□ 0.32
COLCA2-202ENST00000526216 DDTLA6NHG4 134 aaPredicted RBP17.04■□□□□ 0.32
COLCA2-202ENST00000526216 PRDM1O75626 825 aa17.04■□□□□ 0.32
COLCA2-202ENST00000526216 POLR3DP05423 398 aaPredicted RBP17.04■□□□□ 0.32
COLCA2-202ENST00000526216 MMP14P50281 582 aa17.04■□□□□ 0.32
COLCA2-202ENST00000526216 TCP10Q12799 353 aa17.04■□□□□ 0.32
COLCA2-202ENST00000526216 MFSD6Q6ZSS7 791 aa17.04■□□□□ 0.32
COLCA2-202ENST00000526216 NOL8Q76FK4 1167 aaKnown RBP17.04■□□□□ 0.32
COLCA2-202ENST00000526216 HSCBQ8IWL3 235 aa17.04■□□□□ 0.32
COLCA2-202ENST00000526216 TRPM4Q8TD43 1214 aa17.04■□□□□ 0.32
COLCA2-202ENST00000526216 K7ELQ4 463 aaPredicted RBP17.03■□□□□ 0.32
COLCA2-202ENST00000526216 PRC1O43663 620 aa17.03■□□□□ 0.32
COLCA2-202ENST00000526216 ORC4O43929 436 aa17.03■□□□□ 0.32
COLCA2-202ENST00000526216 ENTPD3O75355 529 aa17.03■□□□□ 0.32
COLCA2-202ENST00000526216 LARGE1O95461 756 aa17.03■□□□□ 0.32
COLCA2-202ENST00000526216 HMGB1P09429 215 aaKnown RBP17.03■□□□□ 0.32
COLCA2-202ENST00000526216 EPS15P42566 896 aa17.03■□□□□ 0.32
COLCA2-202ENST00000526216 GABPAQ06546 454 aa17.03■□□□□ 0.32
COLCA2-202ENST00000526216 RRP12Q5JTH9 1297 aaKnown RBP17.03■□□□□ 0.32
COLCA2-202ENST00000526216 RBM26Q5T8P6 1007 aaKnown RBP17.03■□□□□ 0.32
COLCA2-202ENST00000526216 Q6ZUG5 572 aa17.03■□□□□ 0.32
COLCA2-202ENST00000526216 RALYLQ86SE5 291 aaKnown RBP17.03■□□□□ 0.32
COLCA2-202ENST00000526216 AGXT2Q9BYV1 514 aa17.03■□□□□ 0.32
COLCA2-202ENST00000526216 ATRNL1Q5VV63 1379 aa17.02■□□□□ 0.32
COLCA2-202ENST00000526216 TCP10L2B9ZVM9 353 aa17.02■□□□□ 0.32
COLCA2-202ENST00000526216 KDM4AO75164 1064 aa17.02■□□□□ 0.32
COLCA2-202ENST00000526216 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.32
COLCA2-202ENST00000526216 C16orf86Q6ZW13 317 aa17.02■□□□□ 0.32
COLCA2-202ENST00000526216 CDAN1Q8IWY9 1227 aa17.02■□□□□ 0.32
COLCA2-202ENST00000526216 RNF41Q9H4P4 317 aaPredicted RBP17.02■□□□□ 0.32
COLCA2-202ENST00000526216 ZSWIM5Q9P217 1185 aa17.02■□□□□ 0.32
COLCA2-202ENST00000526216 PGAP2Q9UHJ9 254 aa17.02■□□□□ 0.32
COLCA2-202ENST00000526216 WDR19Q8NEZ3 1342 aa17.02■□□□□ 0.32
COLCA2-202ENST00000526216 MCM5P33992 734 aa17.01■□□□□ 0.31
COLCA2-202ENST00000526216 HIRAP54198 1017 aaPredicted RBP17.01■□□□□ 0.31
COLCA2-202ENST00000526216 ST3GAL1Q11201 340 aa17.01■□□□□ 0.31
COLCA2-202ENST00000526216 TRDNQ13061 729 aa17.01■□□□□ 0.31
COLCA2-202ENST00000526216 BECN1Q14457 450 aa17.01■□□□□ 0.31
COLCA2-202ENST00000526216 KRT23Q9C075 422 aa17.01■□□□□ 0.31
COLCA2-202ENST00000526216 DNAJC18Q9H819 358 aa17.01■□□□□ 0.31
COLCA2-202ENST00000526216 CNNM2Q9H8M5 875 aa17.01■□□□□ 0.31
COLCA2-202ENST00000526216 VEZTQ9HBM0 779 aa17.01■□□□□ 0.31
COLCA2-202ENST00000526216 SENP2Q9HC62 589 aa17.01■□□□□ 0.31
COLCA2-202ENST00000526216 TPCN1Q9ULQ1 816 aa17.01■□□□□ 0.31
COLCA2-202ENST00000526216 SCAF8Q9UPN6 1271 aaKnown RBP17.01■□□□□ 0.31
COLCA2-202ENST00000526216 ZC3H4Q9UPT8 1303 aaKnown RBP17.01■□□□□ 0.31
COLCA2-202ENST00000526216 SH2B2O14492 632 aaPredicted RBP17■□□□□ 0.31
COLCA2-202ENST00000526216 PCP11498 1178 aaKnown RBP17■□□□□ 0.31
COLCA2-202ENST00000526216 RASA1P20936 1047 aa17■□□□□ 0.31
COLCA2-202ENST00000526216 CDK8P49336 464 aa17■□□□□ 0.31
COLCA2-202ENST00000526216 FKBP1CQ5VVH2 108 aa17■□□□□ 0.31
COLCA2-202ENST00000526216 AMOTL1Q8IY63 956 aa17■□□□□ 0.31
COLCA2-202ENST00000526216 FBXL16Q8N461 479 aa17■□□□□ 0.31
COLCA2-202ENST00000526216 IL27Q8NEV9 243 aa17■□□□□ 0.31
COLCA2-202ENST00000526216 FAM151AQ8WW52 585 aa17■□□□□ 0.31
COLCA2-202ENST00000526216 BRF1Q92994 677 aa17■□□□□ 0.31
COLCA2-202ENST00000526216 TMX3Q96JJ7 454 aa17■□□□□ 0.31
COLCA2-202ENST00000526216 TOMM22Q9NS69 142 aa17■□□□□ 0.31
COLCA2-202ENST00000526216 TMOD2Q9NZR1 351 aa17■□□□□ 0.31
COLCA2-202ENST00000526216 H7C1D1 291 aa16.99■□□□□ 0.31
COLCA2-202ENST00000526216 MCM2P49736 904 aa16.99■□□□□ 0.31
COLCA2-202ENST00000526216 FAM47AQ5JRC9 791 aa16.99■□□□□ 0.31
COLCA2-202ENST00000526216 TTC6Q86TZ1 520 aa16.99■□□□□ 0.31
COLCA2-202ENST00000526216 IGDCC4Q8TDY8 1250 aa16.99■□□□□ 0.31
COLCA2-202ENST00000526216 L3MBTL3Q96JM7 780 aaPredicted RBP16.99■□□□□ 0.31
COLCA2-202ENST00000526216 ZKSCAN3Q9BRR0 538 aa16.99■□□□□ 0.31
COLCA2-202ENST00000526216 EHD4Q9H223 541 aa16.99■□□□□ 0.31
COLCA2-202ENST00000526216 HACL1Q9UJ83 578 aa16.99■□□□□ 0.31
COLCA2-202ENST00000526216 FAM196BA6NMK8 535 aa16.98■□□□□ 0.31
COLCA2-202ENST00000526216 SLC3A2P08195 630 aaKnown RBP16.98■□□□□ 0.31
COLCA2-202ENST00000526216 SHMT1P34896 483 aa16.98■□□□□ 0.31
COLCA2-202ENST00000526216 PDE4BQ07343 736 aa16.98■□□□□ 0.31
COLCA2-202ENST00000526216 APOBRQ0VD83 1088 aa16.98■□□□□ 0.31
COLCA2-202ENST00000526216 ME3Q16798 604 aa16.98■□□□□ 0.31
COLCA2-202ENST00000526216 FAM83AQ86UY5 434 aa16.98■□□□□ 0.31
COLCA2-202ENST00000526216 METTL16Q86W50 562 aaKnown RBP16.98■□□□□ 0.31
COLCA2-202ENST00000526216 ESR2Q92731 530 aa16.98■□□□□ 0.31
COLCA2-202ENST00000526216 TMEM39BQ9GZU3 492 aa16.98■□□□□ 0.31
COLCA2-202ENST00000526216 DHX36Q9H2U1 1008 aaKnown RBP16.98■□□□□ 0.31
COLCA2-202ENST00000526216 LY9Q9HBG7 655 aa16.98■□□□□ 0.31
COLCA2-202ENST00000526216 LIMCH1Q9UPQ0 1083 aa16.98■□□□□ 0.31
COLCA2-202ENST00000526216 WDR90Q96KV7 1748 aa16.98■□□□□ 0.31
COLCA2-202ENST00000526216 GLTPD2A6NH11 291 aa16.97■□□□□ 0.31
COLCA2-202ENST00000526216 MYO1BO43795 1136 aa16.97■□□□□ 0.31
COLCA2-202ENST00000526216 RANBP6O60518 1105 aaKnown RBP16.97■□□□□ 0.31
COLCA2-202ENST00000526216 HLA-DOAP06340 250 aa16.97■□□□□ 0.31
COLCA2-202ENST00000526216 CUL4AQ13619 759 aa16.97■□□□□ 0.31
COLCA2-202ENST00000526216 SEC23AQ15436 765 aa16.97■□□□□ 0.31
COLCA2-202ENST00000526216 TEPSINQ96N21 525 aa16.97■□□□□ 0.31
COLCA2-202ENST00000526216 SERPINB13Q9UIV8 391 aa16.97■□□□□ 0.31
COLCA2-202ENST00000526216 BRPF3Q9ULD4 1205 aa16.97■□□□□ 0.31
COLCA2-202ENST00000526216 GREB1LQ9C091 1923 aaPredicted RBP16.97■□□□□ 0.31
COLCA2-202ENST00000526216 POTECB2RU33 542 aa16.96■□□□□ 0.31
COLCA2-202ENST00000526216 NMT2O60551 498 aa16.96■□□□□ 0.31
COLCA2-202ENST00000526216 EVCP57679 992 aa16.96■□□□□ 0.31
COLCA2-202ENST00000526216 ANKRD1Q15327 319 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms