RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PHIPQ8WWQ0 1821 aa22.58■■□□□ 1.21
CAPN1-203ENST00000525013 ATAD5Q96QE3 1844 aa22.58■■□□□ 1.21
CAPN1-203ENST00000525013 FLT1P17948 1338 aa22.57■■□□□ 1.2
CAPN1-203ENST00000525013 PTPRFP10586 1907 aa22.57■■□□□ 1.2
CAPN1-203ENST00000525013 MOGSQ13724 837 aa22.57■■□□□ 1.2
CAPN1-203ENST00000525013 TTF1Q15361 905 aaPredicted RBP22.57■■□□□ 1.2
CAPN1-203ENST00000525013 GADL1Q6ZQY3 521 aa22.57■■□□□ 1.2
CAPN1-203ENST00000525013 FASTKD5Q7L8L6 764 aaKnown RBP22.57■■□□□ 1.2
CAPN1-203ENST00000525013 CCDC84Q86UT8 332 aaPredicted RBP22.57■■□□□ 1.2
CAPN1-203ENST00000525013 DNAJC2Q99543 621 aaKnown RBP22.57■■□□□ 1.2
CAPN1-203ENST00000525013 HERC5Q9UII4 1024 aaKnown RBP22.57■■□□□ 1.2
CAPN1-203ENST00000525013 AFG3L2Q9Y4W6 797 aa22.57■■□□□ 1.2
CAPN1-203ENST00000525013 MYH1P12882 1939 aa22.57■■□□□ 1.2
CAPN1-203ENST00000525013 TRIM75PA6NK02 468 aa22.56■■□□□ 1.2
CAPN1-203ENST00000525013 CAP1Q01518 475 aa22.56■■□□□ 1.2
CAPN1-203ENST00000525013 KIF22Q14807 665 aa22.56■■□□□ 1.2
CAPN1-203ENST00000525013 CRACR2BQ8N4Y2 399 aaPredicted RBP22.56■■□□□ 1.2
CAPN1-203ENST00000525013 TRIM34Q9BYJ4 488 aa22.56■■□□□ 1.2
CAPN1-203ENST00000525013 SAP30BPQ9UHR5 308 aaKnown RBP22.56■■□□□ 1.2
CAPN1-203ENST00000525013 PALD1Q9ULE6 856 aa22.56■■□□□ 1.2
CAPN1-203ENST00000525013 PTPN22Q9Y2R2 807 aa22.56■■□□□ 1.2
CAPN1-203ENST00000525013 A0A0G2JLL6 359 aaPredicted RBP22.55■■□□□ 1.2
CAPN1-203ENST00000525013 GOLIM4O00461 696 aa22.55■■□□□ 1.2
CAPN1-203ENST00000525013 USP5P45974 858 aa22.55■■□□□ 1.2
CAPN1-203ENST00000525013 GPAT2Q6NUI2 795 aa22.55■■□□□ 1.2
CAPN1-203ENST00000525013 PRRT2Q7Z6L0 340 aaPredicted RBP22.55■■□□□ 1.2
CAPN1-203ENST00000525013 CERS3Q8IU89 383 aa22.55■■□□□ 1.2
CAPN1-203ENST00000525013 YTHDC1Q96MU7 727 aaKnown RBP22.55■■□□□ 1.2
CAPN1-203ENST00000525013 CPA4Q9UI42 421 aa22.55■■□□□ 1.2
CAPN1-203ENST00000525013 SIPA1L1O43166 1804 aa22.54■■□□□ 1.2
CAPN1-203ENST00000525013 ECM2O94769 699 aaPredicted RBP22.54■■□□□ 1.2
CAPN1-203ENST00000525013 CAP2P40123 477 aa22.54■■□□□ 1.2
CAPN1-203ENST00000525013 SLC4A8Q2Y0W8 1093 aa22.54■■□□□ 1.2
CAPN1-203ENST00000525013 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.54■■□□□ 1.2
CAPN1-203ENST00000525013 PARK7Q99497 189 aaKnown RBP22.54■■□□□ 1.2
CAPN1-203ENST00000525013 LRRCC1Q9C099 1032 aa22.54■■□□□ 1.2
CAPN1-203ENST00000525013 HLA-DOAP06340 250 aa22.53■■□□□ 1.2
CAPN1-203ENST00000525013 LACTBP83111 547 aaPredicted RBP22.53■■□□□ 1.2
CAPN1-203ENST00000525013 RRP1BQ14684 758 aaKnown RBP22.53■■□□□ 1.2
CAPN1-203ENST00000525013 SLC9C2Q5TAH2 1124 aa22.53■■□□□ 1.2
CAPN1-203ENST00000525013 TMED8Q6PL24 325 aaPredicted RBP22.53■■□□□ 1.2
CAPN1-203ENST00000525013 C17orf99Q6UX52 265 aa22.53■■□□□ 1.2
CAPN1-203ENST00000525013 FOXP4Q8IVH2 680 aaPredicted RBP22.53■■□□□ 1.2
CAPN1-203ENST00000525013 KIAA0100Q14667 2235 aaKnown RBP22.53■■□□□ 1.2
CAPN1-203ENST00000525013 ZSWIM8A7E2V4 1837 aa22.52■■□□□ 1.2
CAPN1-203ENST00000525013 SMARCA5O60264 1052 aaPredicted RBP22.52■■□□□ 1.2
CAPN1-203ENST00000525013 CYP2C8P10632 490 aa22.52■■□□□ 1.2
CAPN1-203ENST00000525013 PDE6AP16499 860 aa22.52■■□□□ 1.2
CAPN1-203ENST00000525013 ARHGAP39Q9C0H5 1083 aa22.52■■□□□ 1.2
CAPN1-203ENST00000525013 BOLA2Q9H3K6 86 aa22.52■■□□□ 1.2
CAPN1-203ENST00000525013 HTTP42858 3142 aa22.52■■□□□ 1.2
CAPN1-203ENST00000525013 MAGEB6P1A0A0J9YX57 407 aa22.51■■□□□ 1.19
CAPN1-203ENST00000525013 SPP2Q13103 211 aa22.51■■□□□ 1.19
CAPN1-203ENST00000525013 ZNF280CQ8ND82 737 aa22.51■■□□□ 1.19
CAPN1-203ENST00000525013 EDC3Q96F86 508 aaKnown RBP22.51■■□□□ 1.19
CAPN1-203ENST00000525013 PDE4DIPQ5VU43 2346 aa22.5■■□□□ 1.19
CAPN1-203ENST00000525013 USP17L5A8MUK1 530 aa22.5■■□□□ 1.19
CAPN1-203ENST00000525013 ATP5JP18859 108 aa22.5■■□□□ 1.19
CAPN1-203ENST00000525013 PAG1Q9NWQ8 432 aa22.5■■□□□ 1.19
CAPN1-203ENST00000525013 TBC1D2Q9BYX2 928 aa22.49■■□□□ 1.19
CAPN1-203ENST00000525013 DNAJC18Q9H819 358 aa22.49■■□□□ 1.19
CAPN1-203ENST00000525013 ADGRA2Q96PE1 1338 aa22.49■■□□□ 1.19
CAPN1-203ENST00000525013 ZNF532Q9HCE3 1301 aa22.49■■□□□ 1.19
CAPN1-203ENST00000525013 GDF11O95390 407 aa22.48■■□□□ 1.19
CAPN1-203ENST00000525013 ASNSP08243 561 aa22.48■■□□□ 1.19
CAPN1-203ENST00000525013 PSMC4P43686 418 aa22.48■■□□□ 1.19
CAPN1-203ENST00000525013 RRP1P56182 461 aaKnown RBP22.48■■□□□ 1.19
CAPN1-203ENST00000525013 METTL16Q86W50 562 aaKnown RBP22.48■■□□□ 1.19
CAPN1-203ENST00000525013 SMCR8Q8TEV9 937 aaPredicted RBP22.48■■□□□ 1.19
CAPN1-203ENST00000525013 RIOK1Q9BRS2 568 aaKnown RBP22.48■■□□□ 1.19
CAPN1-203ENST00000525013 AS3MTQ9HBK9 375 aa22.48■■□□□ 1.19
CAPN1-203ENST00000525013 SLC45A1Q9Y2W3 748 aa22.48■■□□□ 1.19
CAPN1-203ENST00000525013 PTCH2Q9Y6C5 1203 aa22.48■■□□□ 1.19
CAPN1-203ENST00000525013 FMNL1O95466 1100 aaPredicted RBP22.47■■□□□ 1.19
CAPN1-203ENST00000525013 GNRH1P01148 92 aa22.47■■□□□ 1.19
CAPN1-203ENST00000525013 HMGCS2P54868 508 aa22.47■■□□□ 1.19
CAPN1-203ENST00000525013 HAUS7Q99871 368 aa22.47■■□□□ 1.19
CAPN1-203ENST00000525013 CRNKL1Q9BZJ0 848 aaKnown RBP22.47■■□□□ 1.19
CAPN1-203ENST00000525013 DCTPP1Q9H773 170 aa22.47■■□□□ 1.19
CAPN1-203ENST00000525013 AGTPBP1Q9UPW5 1226 aa22.47■■□□□ 1.19
CAPN1-203ENST00000525013 CENPFP49454 3210 aa22.47■■□□□ 1.19
CAPN1-203ENST00000525013 MYH7P12883 1935 aa22.47■■□□□ 1.19
CAPN1-203ENST00000525013 TNRC18O15417 2968 aaPredicted RBP22.46■■□□□ 1.19
CAPN1-203ENST00000525013 BCRP11274 1271 aa22.46■■□□□ 1.19
CAPN1-203ENST00000525013 JAG1P78504 1218 aa22.46■■□□□ 1.19
CAPN1-203ENST00000525013 SLC9C1Q4G0N8 1177 aa22.46■■□□□ 1.19
CAPN1-203ENST00000525013 TREML2Q5T2D2 321 aa22.46■■□□□ 1.19
CAPN1-203ENST00000525013 TTC6Q86TZ1 520 aa22.46■■□□□ 1.19
CAPN1-203ENST00000525013 PROCA1Q8NCQ7 364 aaPredicted RBP22.46■■□□□ 1.19
CAPN1-203ENST00000525013 TRIM47Q96LD4 638 aa22.46■■□□□ 1.19
CAPN1-203ENST00000525013 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.46■■□□□ 1.192e-7■■■■□ 20.4
CAPN1-203ENST00000525013 MGAMO43451 1857 aa22.45■■□□□ 1.19
CAPN1-203ENST00000525013 NAV1Q8NEY1 1877 aa22.45■■□□□ 1.19
CAPN1-203ENST00000525013 TCRBV5S4A2TA0A5A2 114 aa22.45■■□□□ 1.18
CAPN1-203ENST00000525013 POLR3DP05423 398 aaPredicted RBP22.45■■□□□ 1.18
CAPN1-203ENST00000525013 SHROOM1Q2M3G4 852 aaPredicted RBP22.45■■□□□ 1.18
CAPN1-203ENST00000525013 NBPF11Q86T75 865 aa22.45■■□□□ 1.18
CAPN1-203ENST00000525013 ARMC5Q96C12 935 aa22.45■■□□□ 1.18
CAPN1-203ENST00000525013 SERPINB13Q9UIV8 391 aa22.45■■□□□ 1.18
CAPN1-203ENST00000525013 LOC285556D6RIA3 1793 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms