RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 RING1Q06587 406 aa7.55□□□□□ -1.2
HMGB1P1-201ENST00000522557 RNF34Q969K3 372 aa7.55□□□□□ -1.2
HMGB1P1-201ENST00000522557 PCDHB5Q9Y5E4 795 aa7.55□□□□□ -1.2
HMGB1P1-201ENST00000522557 NTF4P34130 210 aa7.54□□□□□ -1.2
HMGB1P1-201ENST00000522557 CDK8P49336 464 aa7.54□□□□□ -1.2
HMGB1P1-201ENST00000522557 CYP27A1Q02318 531 aa7.54□□□□□ -1.2
HMGB1P1-201ENST00000522557 CPSF6Q16630 551 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGB1P1-201ENST00000522557 MSMPQ1L6U9 139 aa7.54□□□□□ -1.2
HMGB1P1-201ENST00000522557 NAALADL2Q58DX5 795 aa7.54□□□□□ -1.2
HMGB1P1-201ENST00000522557 C9orf131Q5VYM1 1079 aa7.54□□□□□ -1.2
HMGB1P1-201ENST00000522557 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P1-201ENST00000522557 ERMP1Q7Z2K6 904 aa7.54□□□□□ -1.2
HMGB1P1-201ENST00000522557 UBE3DQ7Z6J8 389 aa7.54□□□□□ -1.2
HMGB1P1-201ENST00000522557 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGB1P1-201ENST00000522557 SREK1Q8WXA9 508 aaKnown RBP7.54□□□□□ -1.2
HMGB1P1-201ENST00000522557 LRRC4CQ9HCJ2 640 aa7.54□□□□□ -1.2
HMGB1P1-201ENST00000522557 LEFTY1O75610 366 aa7.53□□□□□ -1.2
HMGB1P1-201ENST00000522557 FAM87AP0C7U9 286 aa7.53□□□□□ -1.2
HMGB1P1-201ENST00000522557 TAF1CQ15572 869 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P1-201ENST00000522557 SCARA3Q6AZY7 606 aa7.53□□□□□ -1.2
HMGB1P1-201ENST00000522557 LRFN4Q6PJG9 635 aa7.53□□□□□ -1.2
HMGB1P1-201ENST00000522557 GAL3ST3Q96A11 431 aa7.53□□□□□ -1.2
HMGB1P1-201ENST00000522557 PSMG3-AS1Q96PY0 264 aa7.53□□□□□ -1.2
HMGB1P1-201ENST00000522557 PICK1Q9NRD5 415 aa7.53□□□□□ -1.2
HMGB1P1-201ENST00000522557 DDX41Q9UJV9 622 aaKnown RBP7.53□□□□□ -1.2
HMGB1P1-201ENST00000522557 RACK1P63244 317 aaKnown RBP7.52□□□□□ -1.21
HMGB1P1-201ENST00000522557 SLC43A3Q8NBI5 491 aa7.52□□□□□ -1.21
HMGB1P1-201ENST00000522557 ELMO3Q96BJ8 720 aa7.52□□□□□ -1.21
HMGB1P1-201ENST00000522557 PLPPR2Q96GM1 343 aa7.52□□□□□ -1.21
HMGB1P1-201ENST00000522557 GMLQ99445 158 aa7.52□□□□□ -1.21
HMGB1P1-201ENST00000522557 ZC3H7BQ9UGR2 993 aaKnown RBP7.52□□□□□ -1.21
HMGB1P1-201ENST00000522557 LIG3P49916 1009 aa7.51□□□□□ -1.21
HMGB1P1-201ENST00000522557 RPS26P62854 115 aaKnown RBP7.51□□□□□ -1.21
HMGB1P1-201ENST00000522557 SEPT6Q14141 434 aa7.51□□□□□ -1.21
HMGB1P1-201ENST00000522557 CYP27C1Q4G0S4 372 aa7.51□□□□□ -1.21
HMGB1P1-201ENST00000522557 ZBTB37Q5TC79 503 aa7.51□□□□□ -1.21
HMGB1P1-201ENST00000522557 AGMOQ6ZNB7 445 aa7.51□□□□□ -1.21
HMGB1P1-201ENST00000522557 TLR6Q9Y2C9 796 aa7.51□□□□□ -1.21
HMGB1P1-201ENST00000522557 FANCGO15287 622 aa7.5□□□□□ -1.21
HMGB1P1-201ENST00000522557 WNT11O96014 354 aa7.5□□□□□ -1.21
HMGB1P1-201ENST00000522557 CYFIP1Q7L576 1253 aa7.5□□□□□ -1.21
HMGB1P1-201ENST00000522557 TOP6BLQ8N6T0 577 aa7.5□□□□□ -1.21
HMGB1P1-201ENST00000522557 DUSP23Q9BVJ7 150 aa7.5□□□□□ -1.21
HMGB1P1-201ENST00000522557 OAS3Q9Y6K5 1087 aaKnown RBP7.5□□□□□ -1.21
HMGB1P1-201ENST00000522557 PRAMEF27A3QJZ7 478 aa7.49□□□□□ -1.21
HMGB1P1-201ENST00000522557 F6X3S4 739 aa7.49□□□□□ -1.21
HMGB1P1-201ENST00000522557 TFE3P19532 575 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P1-201ENST00000522557 GP2P55259 537 aaKnown RBP7.49□□□□□ -1.21
HMGB1P1-201ENST00000522557 WIPI1Q5MNZ9 446 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P1-201ENST00000522557 CDC37L1Q7L3B6 337 aa7.49□□□□□ -1.21
HMGB1P1-201ENST00000522557 HDXQ7Z353 690 aa7.49□□□□□ -1.21
HMGB1P1-201ENST00000522557 FAM181AQ8N9Y4 354 aa7.49□□□□□ -1.21
HMGB1P1-201ENST00000522557 CCDC39Q9UFE4 941 aa7.49□□□□□ -1.21
HMGB1P1-201ENST00000522557 U3KQE9 123 aa7.49□□□□□ -1.21
HMGB1P1-201ENST00000522557 LMNB1P20700 586 aa7.48□□□□□ -1.21
HMGB1P1-201ENST00000522557 GJA8P48165 433 aa7.48□□□□□ -1.21
HMGB1P1-201ENST00000522557 NFXL1Q6ZNB6 911 aa7.48□□□□□ -1.21
HMGB1P1-201ENST00000522557 JARID2Q92833 1246 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P1-201ENST00000522557 NOC4LQ9BVI4 516 aaKnown RBP7.48□□□□□ -1.21
HMGB1P1-201ENST00000522557 ACBD3Q9H3P7 528 aa7.48□□□□□ -1.21
HMGB1P1-201ENST00000522557 FBRSQ9HAH7 460 aa7.48□□□□□ -1.21
HMGB1P1-201ENST00000522557 BSDC1Q9NW68 430 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P1-201ENST00000522557 SNCAIPQ9Y6H5 919 aa7.48□□□□□ -1.21
HMGB1P1-201ENST00000522557 GFRA2O00451 464 aa7.47□□□□□ -1.21
HMGB1P1-201ENST00000522557 ZNF394Q53GI3 561 aa7.47□□□□□ -1.21
HMGB1P1-201ENST00000522557 FAM214BQ7L5A3 538 aa7.47□□□□□ -1.21
HMGB1P1-201ENST00000522557 ZNF507Q8TCN5 953 aa7.47□□□□□ -1.21
HMGB1P1-201ENST00000522557 DRC1Q96MC2 740 aa7.47□□□□□ -1.21
HMGB1P1-201ENST00000522557 WNT10AQ9GZT5 417 aa7.47□□□□□ -1.21
HMGB1P1-201ENST00000522557 KCNQ5Q9NR82 932 aa7.47□□□□□ -1.21
HMGB1P1-201ENST00000522557 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P1-201ENST00000522557 PRNPP04156 253 aa7.46□□□□□ -1.22
HMGB1P1-201ENST00000522557 TNNI2P48788 182 aa7.46□□□□□ -1.22
HMGB1P1-201ENST00000522557 HS2ST1Q7LGA3 356 aa7.46□□□□□ -1.22
HMGB1P1-201ENST00000522557 PLD6Q8N2A8 252 aaKnown RBP7.46□□□□□ -1.22
HMGB1P1-201ENST00000522557 PHC3Q8NDX5 983 aa7.46□□□□□ -1.22
HMGB1P1-201ENST00000522557 HEXIM2Q96MH2 286 aaKnown RBP7.46□□□□□ -1.22
HMGB1P1-201ENST00000522557 MIR1-1HGQ9H1L0 117 aa7.46□□□□□ -1.22
HMGB1P1-201ENST00000522557 PRDM10Q9NQV6 1147 aa7.46□□□□□ -1.22
HMGB1P1-201ENST00000522557 ETF1P62495 437 aaKnown RBP7.45□□□□□ -1.22
HMGB1P1-201ENST00000522557 SLBPQ14493 270 aaKnown RBP eCLIP7.45□□□□□ -1.22
HMGB1P1-201ENST00000522557 SF3A1Q15459 793 aaKnown RBP7.45□□□□□ -1.22
HMGB1P1-201ENST00000522557 NKG7Q16617 165 aa7.45□□□□□ -1.22
HMGB1P1-201ENST00000522557 ANGEL1Q9UNK9 670 aaKnown RBP7.45□□□□□ -1.22
HMGB1P1-201ENST00000522557 PCDHGB7Q9Y5F8 929 aa7.45□□□□□ -1.22
HMGB1P1-201ENST00000522557 RBAK-RBAKDNI3L0D1 243 aa7.44□□□□□ -1.22
HMGB1P1-201ENST00000522557 RLBP1P12271 317 aa7.44□□□□□ -1.22
HMGB1P1-201ENST00000522557 GRK4P32298 578 aa7.44□□□□□ -1.22
HMGB1P1-201ENST00000522557 OXCT1P55809 520 aa7.44□□□□□ -1.22
HMGB1P1-201ENST00000522557 BNIP3Q12983 259 aa7.44□□□□□ -1.22
HMGB1P1-201ENST00000522557 ARMCX6Q7L4S7 300 aa7.44□□□□□ -1.22
HMGB1P1-201ENST00000522557 KCT2Q8NC54 265 aa7.44□□□□□ -1.22
HMGB1P1-201ENST00000522557 UBXN4Q92575 508 aa7.44□□□□□ -1.22
HMGB1P1-201ENST00000522557 RSRP1Q9BUV0 290 aa7.44□□□□□ -1.22
HMGB1P1-201ENST00000522557 COPRSQ9NQ92 184 aa7.44□□□□□ -1.22
HMGB1P1-201ENST00000522557 USP35Q9P2H5 1018 aa7.44□□□□□ -1.22
HMGB1P1-201ENST00000522557 PLAGL2Q9UPG8 496 aa7.44□□□□□ -1.22
HMGB1P1-201ENST00000522557 LRIG2O94898 1065 aa7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 EOMESO95936 686 aa7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 PF4P02776 101 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms