RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ENAHQ8N8S7 591 aaPredicted RBP5.04□□□□□ -1.6
SKP1-209ENST00000522552 LEO1Q8WVC0 666 aaPredicted RBP5.04□□□□□ -1.6
SKP1-209ENST00000522552 GATAD2BQ8WXI9 593 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 BRMS1Q9HCU9 246 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 NGRNQ9NPE2 291 aaKnown RBP5.04□□□□□ -1.6
SKP1-209ENST00000522552 PUF60Q9UHX1 559 aaKnown RBP5.04□□□□□ -1.6
SKP1-209ENST00000522552 RTCBQ9Y3I0 505 aaKnown RBP5.04□□□□□ -1.6
SKP1-209ENST00000522552 TMEM238LA0A1B0GVL6 79 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 A0A1W2PQH9 124 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 FAM221AA4D161 298 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 FAM83GA6ND36 823 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 RASSF10A6NK89 507 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 GABRDO14764 452 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 PLD2O14939 933 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 GPR39O43194 453 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 SDSP20132 328 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 SERPINB3P29508 390 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 CCNFP41002 786 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 WDR4P57081 412 aaKnown RBP5.03□□□□□ -1.6
SKP1-209ENST00000522552 INSM1Q01101 510 aaPredicted RBP5.03□□□□□ -1.6
SKP1-209ENST00000522552 MPP2Q14168 576 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 FNDC3BQ53EP0 1204 aaKnown RBP5.03□□□□□ -1.6
SKP1-209ENST00000522552 PEAR1Q5VY43 1037 aaPredicted RBP5.03□□□□□ -1.6
SKP1-209ENST00000522552 FOXB2Q5VYV0 432 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 HGSNATQ68CP4 663 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 NLRP8Q86W28 1048 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 C19orf47Q8N9M1 422 aaKnown RBP5.03□□□□□ -1.6
SKP1-209ENST00000522552 VPS37AQ8NEZ2 397 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 KLRG1Q96E93 195 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 PKNOX2Q96KN3 472 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 EXOC2Q96KP1 924 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 STRBPQ96SI9 672 aaKnown RBP5.03□□□□□ -1.6
SKP1-209ENST00000522552 FHDC1Q9C0D6 1143 aaPredicted RBP5.03□□□□□ -1.6
SKP1-209ENST00000522552 TRHDEQ9UKU6 1024 aa5.03□□□□□ -1.6
SKP1-209ENST00000522552 TPX2Q9ULW0 747 aaKnown RBP5.03□□□□□ -1.6
SKP1-209ENST00000522552 ENC1O14682 589 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 CAPN5O15484 640 aaPredicted RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 PIP5K1CO60331 668 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 ZIC2O95409 532 aaPredicted RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 PGRP06401 933 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 INPP5BP32019 993 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 ARSDP51689 593 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 STAT4Q14765 748 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 IER5Q5VY09 327 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 CXorf57Q6NSI4 855 aaKnown RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 LRRC47Q8N1G4 583 aaKnown RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 ZNF280CQ8ND82 737 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 ENOX1Q8TC92 643 aaKnown RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 USP33Q8TEY7 942 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 C7orf43Q8WVR3 580 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 KISS1RQ969F8 398 aaPredicted RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 ITPKCQ96DU7 683 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 CDC5LQ99459 802 aaKnown RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 CEP44Q9C0F1 390 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 ZFAND3Q9H8U3 227 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 OSGEPQ9NPF4 335 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 PRDM11Q9NQV5 511 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 ATG3Q9NT62 314 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 INTS7Q9NVH2 962 aaKnown RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 DZANK1Q9NVP4 752 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 TNKSO95271 1327 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 TIMP2P16035 220 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 EPB42P16452 691 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 CES1P23141 567 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 HALP42357 657 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 PPM1FP49593 454 aaPredicted RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 RPS26P62854 115 aaKnown RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 CENPCQ03188 943 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 NR5A1Q13285 461 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 HIF1AQ16665 826 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 SLC10A6Q3KNW5 377 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 CCDC184Q52MB2 194 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 NBPF10Q6P3W6 841 aaKnown RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 REC114Q7Z4M0 266 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 TTC6Q86TZ1 520 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 CCDC84Q86UT8 332 aaPredicted RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 TPH2Q8IWU9 490 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 DRC7Q8IY82 874 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 MPNDQ8N594 471 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 RHPN1Q8TCX5 695 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 JARID2Q92833 1246 aaPredicted RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 SUSD3Q96L08 255 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 ELAC2Q9BQ52 826 aaKnown RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 NIFKQ9BYG3 293 aaKnown RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 PUS7LQ9H0K6 701 aaKnown RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 FBRSQ9HAH7 460 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 ABI2Q9NYB9 513 aaPredicted RBP5.02□□□□□ -1.61
SKP1-209ENST00000522552 GTF2A1LQ9UNN4 478 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 PCDHB5Q9Y5E4 795 aa5.02□□□□□ -1.61
SKP1-209ENST00000522552 DYTNA2CJ06 578 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 KLRG2A4D1S0 409 aaPredicted RBP5.01□□□□□ -1.61
SKP1-209ENST00000522552 APAF1O14727 1248 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 PAGE1O75459 146 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 RNASEH2AO75792 299 aaKnown RBP5.01□□□□□ -1.61
SKP1-209ENST00000522552 ARAFP10398 606 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 SARSP49591 514 aaKnown RBP5.01□□□□□ -1.61
SKP1-209ENST00000522552 CLN3Q13286 438 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 SLC4A8Q2Y0W8 1093 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 PPP1R26Q5T8A7 1209 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms