RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ST7Q9NRC1 585 aa7.76□□□□□ -1.17
HMGB1P46-201ENST00000520062 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.76□□□□□ -1.17
HMGB1P46-201ENST00000520062 TNFRSF10CO14798 259 aa7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 AOC2O75106 756 aa7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 DEAF1O75398 565 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 GJB6O95452 261 aa7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 NME1P15531 152 aaKnown RBP7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 AMPD1P23109 780 aa7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 DGKGP49619 791 aa7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 FOXD4L6Q3SYB3 417 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 PLEKHG4Q58EX7 1191 aa7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 FOXD4L3Q6VB84 417 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 NLRC3Q7RTR2 1065 aa7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 ANKRD13AQ8IZ07 590 aa7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 ST13P5Q8NFI4 369 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 ATG4CQ96DT6 458 aa7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 DNAJC7Q99615 494 aa7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 WNT10AQ9GZT5 417 aa7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 TMX1Q9H3N1 280 aa7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 PHAXQ9H814 394 aaKnown RBP7.75□□□□□ -1.17
HMGB1P46-201ENST00000520062 DCDC2CA8MYV0 355 aa7.74□□□□□ -1.17
HMGB1P46-201ENST00000520062 FANCGO15287 622 aa7.74□□□□□ -1.17
HMGB1P46-201ENST00000520062 GRK4P32298 578 aa7.74□□□□□ -1.17
HMGB1P46-201ENST00000520062 ID3Q02535 119 aa7.74□□□□□ -1.17
HMGB1P46-201ENST00000520062 NCAPHQ15003 741 aa7.74□□□□□ -1.17
HMGB1P46-201ENST00000520062 EXOSC6Q5RKV6 272 aaKnown RBP7.74□□□□□ -1.17
HMGB1P46-201ENST00000520062 FAM178BQ8IXR5 827 aa7.74□□□□□ -1.17
HMGB1P46-201ENST00000520062 MICAL1Q8TDZ2 1067 aa7.74□□□□□ -1.17
HMGB1P46-201ENST00000520062 SH3TC2Q8TF17 1288 aa7.74□□□□□ -1.17
HMGB1P46-201ENST00000520062 HIF3AQ9Y2N7 669 aa7.74□□□□□ -1.17
HMGB1P46-201ENST00000520062 PRAMEF27A3QJZ7 478 aa7.73□□□□□ -1.17
HMGB1P46-201ENST00000520062 PPM1GO15355 546 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P46-201ENST00000520062 DDAH1O94760 285 aa7.73□□□□□ -1.17
HMGB1P46-201ENST00000520062 DLGAP3O95886 979 aa7.73□□□□□ -1.17
HMGB1P46-201ENST00000520062 PGRP06401 933 aa7.73□□□□□ -1.17
HMGB1P46-201ENST00000520062 CCNFP41002 786 aa7.73□□□□□ -1.17
HMGB1P46-201ENST00000520062 CHMP4BP1P59074 171 aa7.73□□□□□ -1.17
HMGB1P46-201ENST00000520062 C12orf40Q86WS4 652 aa7.73□□□□□ -1.17
HMGB1P46-201ENST00000520062 FBXO11Q86XK2 927 aa7.73□□□□□ -1.17
HMGB1P46-201ENST00000520062 LILRB2Q8N423 598 aa7.73□□□□□ -1.17
HMGB1P46-201ENST00000520062 JMYQ8N9B5 988 aa7.73□□□□□ -1.17
HMGB1P46-201ENST00000520062 RAD18Q9NS91 495 aa7.73□□□□□ -1.17
HMGB1P46-201ENST00000520062 MEGF11A6BM72 1044 aa7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 DLL1O00548 723 aa7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 DDX3YO15523 660 aaKnown RBP7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 DNAJA2O60884 412 aa7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 CDC45O75419 566 aa7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 CELA2BP08218 269 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 ACRP10323 421 aa7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 ETF1P62495 437 aaKnown RBP7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 MTERF2Q49AM1 385 aa7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 ZBTB37Q5TC79 503 aa7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 ZNF787Q6DD87 383 aa7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 C6orf15Q6UXA7 325 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 UNC5AQ6ZN44 842 aa7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 SLFN12Q8IYM2 578 aa7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 THAP3Q8WTV1 239 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 TMPRSS13Q9BYE2 586 aa7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 KCNK4Q9NYG8 393 aa7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 CRIM1Q9NZV1 1036 aa7.72□□□□□ -1.17
HMGB1P46-201ENST00000520062 UPK3BL1B0FP48 263 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 UPK3BL2E5RIL1 263 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 TMPRSS2O15393 492 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 HOXB4P17483 251 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 YARSP54577 528 aaKnown RBP7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 RAC1P63000 192 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 DUOXA2Q1HG44 320 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 C2orf27AQ580R0 203 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 EEPD1Q7L9B9 569 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 HOMER1Q86YM7 354 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 MCATQ8IVS2 390 aaKnown RBP7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 FMR1NBQ8N0W7 255 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 UBASH3BQ8TF42 649 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 APPBP2Q92624 585 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 ACSF2Q96CM8 615 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 SLC9A7Q96T83 725 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 EPN3Q9H201 632 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 SUGCTQ9HAC7 445 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 TMEM260Q9NX78 707 aa7.71□□□□□ -1.18
HMGB1P46-201ENST00000520062 RAG1P15918 1043 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 ZYXQ15942 572 aaKnown RBP7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 ARSHQ5FYA8 562 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 TRAPPC3LQ5T215 181 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 RNF187Q5TA31 235 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 SLC6A19Q695T7 634 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 VHLLQ6RSH7 139 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 LYPD4Q6UWN0 246 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 MRPL41Q8IXM3 137 aaKnown RBP7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 KCT2Q8NC54 265 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 RNF214Q8ND24 703 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 ZNF507Q8TCN5 953 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 BRINP2Q9C0B6 783 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 ATXN3LQ9H3M9 355 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 PICK1Q9NRD5 415 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 KLHL3Q9UH77 587 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 LTBP3Q9NS15 1303 aa7.7□□□□□ -1.18
HMGB1P46-201ENST00000520062 A0A0A0MRY4 1105 aa7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 B2RBV5 119 aa7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 NTF4P34130 210 aa7.69□□□□□ -1.18
HMGB1P46-201ENST00000520062 BBS9Q3SYG4 887 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms