RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 RUFY1Q96T51 708 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 F8W031 263 aaPredicted RBP12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 CMA1P23946 247 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 MTIF2P46199 727 aaKnown RBP12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 SYT10Q6XYQ8 523 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 IQUBQ8NA54 791 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 ZNF622Q969S3 477 aaKnown RBP eCLIP12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 UTYO14607 1347 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 PALLDQ8WX93 1383 aa12.82□□□□□ -0.36
PCDHGB4-201ENST00000519479 BTBD18B2RXH4 712 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 NAPAP54920 295 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 TSGA10IPQ3SY00 556 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 NOSTRINQ8IVI9 506 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 PDLIM2Q96JY6 352 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 PIH1D3Q9NQM4 214 aaKnown RBP12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 VPS54Q9P1Q0 977 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 MED23Q9ULK4 1368 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 RPS8P62241 208 aaKnown RBP12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 PNOCQ13519 176 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 XPO4Q9C0E2 1151 aaKnown RBP12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 PYCARDQ9ULZ3 195 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 TAF6LQ9Y6J9 622 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 USP17L12C9JPN9 530 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 USP17L21D6R901 530 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 SLU7O95391 586 aaKnown RBP12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 AMPD3Q01432 767 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 FANCBQ8NB91 859 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 TDRD7Q8NHU6 1098 aaKnown RBP12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 TSC1Q92574 1164 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 ISCA1Q9BUE6 129 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 ZSWIM4Q9H7M6 989 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 NRBP1Q9UHY1 535 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 A0A1W2PQ27 194 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 A0A1W2PQ64 194 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 A0A1W2PQD8 194 aa12.81□□□□□ -0.36
PCDHGB4-201ENST00000519479 XRN1Q8IZH2 1706 aaKnown RBP12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 TRIM37O94972 964 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 ZNF76P36508 570 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 PPP2R5BQ15173 497 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 PIK3AP1Q6ZUJ8 805 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 RBM17Q96I25 401 aaKnown RBP12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 CLIC6Q96NY7 704 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 ERVV-1B6SEH8 477 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 SPAG1Q07617 926 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 PICALMQ13492 652 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 NLGN1Q8N2Q7 840 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 LINC00301Q8NCQ3 95 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 LUC7LQ9NQ29 371 aaKnown RBP12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 TMOD2Q9NZR1 351 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 ZNF219Q9P2Y4 722 aaPredicted RBP12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 FMN2Q9NZ56 1722 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 C11orf57Q6ZUT1 292 aaPredicted RBP12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 PGBD1Q96JS3 809 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 POLR3EQ9NVU0 708 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 TNKSO95271 1327 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 RFX7Q2KHR2 1363 aa12.8□□□□□ -0.36
PCDHGB4-201ENST00000519479 SNAP23O00161 211 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 PRKAB2O43741 272 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 POSTNQ15063 836 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 SPA17Q15506 151 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 CCDC181Q5TID7 509 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 STOX1Q6ZVD7 989 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 TICAM2Q86XR7 235 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 CWC15Q9P013 229 aaKnown RBP12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 NFE2L3Q9Y4A8 694 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 NRXN3Q9Y4C0 1643 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 FAM47AQ5JRC9 791 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 AIFM3Q96NN9 605 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 PLIN2Q99541 437 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 GJB4Q9NTQ9 266 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 SAP30BPQ9UHR5 308 aaKnown RBP12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 KIF23Q02241 960 aaPredicted RBP12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 SLC39A14Q15043 492 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 ALDH8A1Q9H2A2 487 aaPredicted RBP12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 EXOC1Q9NV70 894 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 IMPACTQ9P2X3 320 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 RASGRF1Q13972 1273 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 SCARF1Q14162 830 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 TTC38Q5R3I4 469 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 DTHD1Q6ZMT9 781 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 MLKLQ8NB16 471 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 MRFAP1L1Q96HT8 127 aa12.79□□□□□ -0.36
PCDHGB4-201ENST00000519479 ZNF609O15014 1411 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 PSMA7O14818 248 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 SLC27A3Q5K4L6 730 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 SUSD4Q5VX71 490 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 USPL1Q5W0Q7 1092 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 CACNA2D4Q7Z3S7 1137 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 EYA3Q99504 573 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 TSG101Q99816 390 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 ZSWIM5Q9P217 1185 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 ANKRD26Q9UPS8 1709 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 BAG1Q99933 345 aaPredicted RBP12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 SERTAD1Q9UHV2 236 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 SH2B2O14492 632 aaPredicted RBP12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 TUBB4AP04350 444 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms