RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 BTBD19C9JJ37 291 aa29.87■■■□□ 2.37
PVT1-204ENST00000517525 SLURP2P0DP57 97 aa29.87■■■□□ 2.37
PVT1-204ENST00000517525 MOGSQ13724 837 aa29.87■■■□□ 2.37
PVT1-204ENST00000517525 ANKRD23Q86SG2 305 aa29.87■■■□□ 2.37
PVT1-204ENST00000517525 ZFYVE28Q9HCC9 887 aa29.87■■■□□ 2.37
PVT1-204ENST00000517525 AFG3L2Q9Y4W6 797 aa29.87■■■□□ 2.37
PVT1-204ENST00000517525 ZHX2Q9Y6X8 837 aa29.86■■■□□ 2.37
PVT1-204ENST00000517525 CAP2P40123 477 aa29.85■■■□□ 2.37
PVT1-204ENST00000517525 TAF1CQ15572 869 aaPredicted RBP29.85■■■□□ 2.37
PVT1-204ENST00000517525 TBC1D2Q9BYX2 928 aa29.85■■■□□ 2.37
PVT1-204ENST00000517525 FOCADQ5VW36 1801 aa29.85■■■□□ 2.37
PVT1-204ENST00000517525 HDAC1Q13547 482 aaPredicted RBP29.84■■■□□ 2.37
PVT1-204ENST00000517525 EDC3Q96F86 508 aaKnown RBP29.84■■■□□ 2.37
PVT1-204ENST00000517525 GINM1Q9NU53 330 aa29.84■■■□□ 2.37
PVT1-204ENST00000517525 PALD1Q9ULE6 856 aa29.84■■■□□ 2.37
PVT1-204ENST00000517525 ZNF532Q9HCE3 1301 aa29.84■■■□□ 2.37
PVT1-204ENST00000517525 A0A0G2JLL6 359 aaPredicted RBP29.83■■■□□ 2.37
PVT1-204ENST00000517525 MAGEB6P1A0A0J9YX57 407 aa29.83■■■□□ 2.37
PVT1-204ENST00000517525 ADD2P35612 726 aa29.83■■■□□ 2.37
PVT1-204ENST00000517525 PRRT2Q7Z6L0 340 aaPredicted RBP29.83■■■□□ 2.37
PVT1-204ENST00000517525 GPATCH3Q96I76 525 aa29.83■■■□□ 2.37
PVT1-204ENST00000517525 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.83■■■□□ 2.37
PVT1-204ENST00000517525 FAM196BA6NMK8 535 aa29.82■■■□□ 2.36
PVT1-204ENST00000517525 HLA-DOAP06340 250 aa29.82■■■□□ 2.36
PVT1-204ENST00000517525 UBE3CQ15386 1083 aa29.82■■■□□ 2.36
PVT1-204ENST00000517525 FASTKD5Q7L8L6 764 aaKnown RBP29.82■■■□□ 2.36
PVT1-204ENST00000517525 BCL11AQ9H165 835 aa29.82■■■□□ 2.36
PVT1-204ENST00000517525 EHD4Q9H223 541 aa29.82■■■□□ 2.36
PVT1-204ENST00000517525 DNAJC18Q9H819 358 aa29.82■■■□□ 2.36
PVT1-204ENST00000517525 CDK5RAP2Q96SN8 1893 aa29.82■■■□□ 2.36
PVT1-204ENST00000517525 TLR2O60603 784 aa29.81■■■□□ 2.36
PVT1-204ENST00000517525 USP5P45974 858 aa29.81■■■□□ 2.36
PVT1-204ENST00000517525 SP3Q02447 781 aa29.81■■■□□ 2.36
PVT1-204ENST00000517525 RRP1BQ14684 758 aaKnown RBP29.81■■■□□ 2.36
PVT1-204ENST00000517525 ERO1AQ96HE7 468 aa29.81■■■□□ 2.36
PVT1-204ENST00000517525 CRNKL1Q9BZJ0 848 aaKnown RBP29.8■■■□□ 2.36
PVT1-204ENST00000517525 SLC45A1Q9Y2W3 748 aa29.8■■■□□ 2.36
PVT1-204ENST00000517525 DOCK1Q14185 1865 aa29.8■■■□□ 2.36
PVT1-204ENST00000517525 TTC41PQ6P2S7 1318 aa29.79■■■□□ 2.36
PVT1-204ENST00000517525 ZSCAN25Q6NSZ9 544 aa29.79■■■□□ 2.36
PVT1-204ENST00000517525 GPAT2Q6NUI2 795 aa29.79■■■□□ 2.36
PVT1-204ENST00000517525 TTC6Q86TZ1 520 aa29.79■■■□□ 2.36
PVT1-204ENST00000517525 GCC1Q96CN9 775 aa29.79■■■□□ 2.36
PVT1-204ENST00000517525 TAOK2Q9UL54 1235 aa29.79■■■□□ 2.36
PVT1-204ENST00000517525 SIPA1L1O43166 1804 aa29.79■■■□□ 2.36
PVT1-204ENST00000517525 SAP30BPQ9UHR5 308 aaKnown RBP29.78■■■□□ 2.36
PVT1-204ENST00000517525 PDHXO00330 501 aa29.77■■■□□ 2.36
PVT1-204ENST00000517525 ASNSP08243 561 aa29.77■■■□□ 2.36
PVT1-204ENST00000517525 FBXO46Q6PJ61 603 aaPredicted RBP29.77■■■□□ 2.36
PVT1-204ENST00000517525 CRACR2BQ8N4Y2 399 aaPredicted RBP29.77■■■□□ 2.36
PVT1-204ENST00000517525 USP17L5A8MUK1 530 aa29.76■■■□□ 2.35
PVT1-204ENST00000517525 TATDN1Q6P1N9 297 aa29.76■■■□□ 2.35
PVT1-204ENST00000517525 ZNF280CQ8ND82 737 aa29.76■■■□□ 2.35
PVT1-204ENST00000517525 WDR18Q9BV38 432 aa29.76■■■□□ 2.35
PVT1-204ENST00000517525 SERPINB13Q9UIV8 391 aa29.76■■■□□ 2.35
PVT1-204ENST00000517525 ADGRA2Q96PE1 1338 aa29.75■■■□□ 2.35
PVT1-204ENST00000517525 C17orf99Q6UX52 265 aa29.75■■■□□ 2.35
PVT1-204ENST00000517525 OTOP1Q7RTM1 612 aa29.75■■■□□ 2.35
PVT1-204ENST00000517525 LCORLQ8N3X6 602 aa29.75■■■□□ 2.35
PVT1-204ENST00000517525 KBTBD3Q8NAB2 608 aa29.75■■■□□ 2.35
PVT1-204ENST00000517525 TRIM34Q9BYJ4 488 aa29.75■■■□□ 2.35
PVT1-204ENST00000517525 PHIPQ8WWQ0 1821 aa29.75■■■□□ 2.35
PVT1-204ENST00000517525 AS3MTQ9HBK9 375 aa29.74■■■□□ 2.35
PVT1-204ENST00000517525 ERC2O15083 957 aa29.73■■■□□ 2.35
PVT1-204ENST00000517525 ARHGEF6Q15052 776 aa29.73■■■□□ 2.35
PVT1-204ENST00000517525 SH3D19Q5HYK7 790 aa29.73■■■□□ 2.35
PVT1-204ENST00000517525 PROCA1Q8NCQ7 364 aaPredicted RBP29.73■■■□□ 2.35
PVT1-204ENST00000517525 CD99L2Q8TCZ2 262 aa29.73■■■□□ 2.35
PVT1-204ENST00000517525 PARK7Q99497 189 aaKnown RBP29.73■■■□□ 2.35
PVT1-204ENST00000517525 DCP1AQ9NPI6 582 aaPredicted RBP29.73■■■□□ 2.35
PVT1-204ENST00000517525 ATP8A2Q9NTI2 1148 aa29.73■■■□□ 2.35
PVT1-204ENST00000517525 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.73■■■□□ 2.35
PVT1-204ENST00000517525 SALL3Q9BXA9 1300 aa29.72■■■□□ 2.35
PVT1-204ENST00000517525 TRIM75PA6NK02 468 aa29.72■■■□□ 2.35
PVT1-204ENST00000517525 GLRX3O76003 335 aaKnown RBP29.72■■■□□ 2.35
PVT1-204ENST00000517525 GABPAQ06546 454 aa29.72■■■□□ 2.35
PVT1-204ENST00000517525 SPP2Q13103 211 aa29.72■■■□□ 2.35
PVT1-204ENST00000517525 PI4K2BQ8TCG2 481 aa29.72■■■□□ 2.35
PVT1-204ENST00000517525 HPS5Q9UPZ3 1129 aa29.72■■■□□ 2.35
PVT1-204ENST00000517525 CCDC85CA6NKD9 419 aa29.71■■■□□ 2.35
PVT1-204ENST00000517525 JAG1P78504 1218 aa29.71■■■□□ 2.35
PVT1-204ENST00000517525 CCDC84Q86UT8 332 aaPredicted RBP29.71■■■□□ 2.35
PVT1-204ENST00000517525 ARMT1Q9H993 441 aa29.71■■■□□ 2.35
PVT1-204ENST00000517525 EFCC1Q9HA90 598 aa29.71■■■□□ 2.35
PVT1-204ENST00000517525 AGTPBP1Q9UPW5 1226 aa29.71■■■□□ 2.35
PVT1-204ENST00000517525 TRIM17Q9Y577 477 aa29.71■■■□□ 2.35
PVT1-204ENST00000517525 MYH1P12882 1939 aa29.71■■■□□ 2.35
PVT1-204ENST00000517525 MBD4O95243 580 aa29.7■■■□□ 2.35
PVT1-204ENST00000517525 PLCD1P51178 756 aa29.7■■■□□ 2.35
PVT1-204ENST00000517525 SLFNL1Q499Z3 407 aa29.7■■■□□ 2.35
PVT1-204ENST00000517525 MCM9Q9NXL9 1143 aa29.7■■■□□ 2.35
PVT1-204ENST00000517525 ZBTB21Q9ULJ3 1066 aa29.7■■■□□ 2.35
PVT1-204ENST00000517525 DDX60LQ5H9U9 1706 aaKnown RBP29.7■■■□□ 2.34
PVT1-204ENST00000517525 ZFYP08048 801 aaPredicted RBP29.69■■■□□ 2.34
PVT1-204ENST00000517525 MX1P20591 662 aa29.69■■■□□ 2.34
PVT1-204ENST00000517525 CAP1Q01518 475 aa29.69■■■□□ 2.34
PVT1-204ENST00000517525 ANKRD45Q5TZF3 282 aa29.69■■■□□ 2.34
PVT1-204ENST00000517525 TSHZ3Q63HK5 1081 aa29.69■■■□□ 2.34
PVT1-204ENST00000517525 GADL1Q6ZQY3 521 aa29.69■■■□□ 2.34
PVT1-204ENST00000517525 OTUD7AQ8TE49 926 aaPredicted RBP29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms