RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 CTSBP07858 339 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 COL8A1P27658 744 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 ASPAP45381 313 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 CRKP46108 304 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 USP11P51784 963 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 EIF6P56537 245 aaKnown RBP3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 ETF1P62495 437 aaKnown RBP3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PTPN11Q06124 597 aaPredicted RBP3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 KCNMA1Q12791 1236 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 INPP5AQ14642 412 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 MBTPS1Q14703 1052 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 ZBTB37Q5TC79 503 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 SLC6A19Q695T7 634 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 DYMQ7RTS9 669 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 SLC51AQ86UW1 340 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 MCF2L2Q86YR7 1114 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 MCATQ8IVS2 390 aaKnown RBP3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 CKAP2LQ8IYA6 745 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 DZIP1LQ8IYY4 767 aaKnown RBP3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 TAB3Q8N5C8 712 aaPredicted RBP3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 C19orf47Q8N9M1 422 aaKnown RBP3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 FBXO27Q8NI29 283 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 WDR89Q96FK6 387 aaPredicted RBP3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 FAM46AQ96IP4 442 aaKnown RBP3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 FANCD2OSQ96PS1 177 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 TM9SF2Q99805 663 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 SSU72Q9NP77 194 aaKnown RBP3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 DISC1Q9NRI5 854 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 GMIPQ9P107 970 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 USP35Q9P2H5 1018 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PPP1R1BQ9UD71 204 aaPredicted RBP3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PCOLCE2Q9UKZ9 415 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 AP4E1Q9UPM8 1137 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 R3HCC1Q9Y3T6 440 aaKnown RBP3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PCDHB14Q9Y5E9 798 aa3□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PRAMEF27A3QJZ7 478 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 DCDC2CA8MYV0 355 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 HTR3BO95264 441 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PGRP06401 933 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 GLB1P16278 677 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PLCG1P19174 1290 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 NOS3P29474 1203 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 GRK4P32298 578 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 GIPRP48546 466 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 CASP7P55210 303 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 CDCP2Q5VXM1 449 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 SHISA2Q6UWI4 295 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 MPRIPQ6WCQ1 1025 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 GK5Q6ZS86 529 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 C12orf40Q86WS4 652 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 MRPL41Q8IXM3 137 aaKnown RBP2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 SLFN12Q8IYM2 578 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 SMYD4Q8IYR2 804 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 MFSD2AQ8NA29 543 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 C2CD4AQ8NCU7 369 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 TMEM40Q8WWA1 233 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 EZH1Q92800 747 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 DCAF5Q96JK2 942 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 COX4I2Q96KJ9 171 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 DHRS1Q96LJ7 313 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 MYRFLQ96LU7 910 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PRKAG3Q9UGI9 489 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PPP1R9AQ9ULJ8 1098 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 POLR3KQ9Y2Y1 108 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 ACTL7BQ9Y614 415 aa2.99□□□□□ -1.93
RNU6-1041P-201ENST00000516254 SLC22A31A6NKX4 558 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 U2SURPO15042 1029 aaKnown RBP2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 DHX15O43143 795 aaKnown RBP2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 RNGTTO60942 597 aaKnown RBP2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 LRIG2O94898 1065 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 DRD2P14416 443 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 GTF2F1P35269 517 aaKnown RBP eCLIP2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 GATA4P43694 442 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 IREB2P48200 963 aaKnown RBP2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 CHMP4BP1P59074 171 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 CLCQ05315 142 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 TTLL4Q14679 1199 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 BBS9Q3SYG4 887 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PPM1JQ5JR12 505 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 FBXW10Q5XX13 1052 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 ZNF746Q6NUN9 644 aaPredicted RBP2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PAOXQ6QHF9 649 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 LRP10Q7Z4F1 713 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 KRTAP1-3Q8IUG1 177 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 CLEC10AQ8IUN9 316 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 AGGF1Q8N302 714 aaeCLIP2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 UTP4Q969X6 686 aaKnown RBP2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 SHDQ96IW2 340 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 CCDC74BQ96LY2 380 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 FOXQ1Q9C009 403 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 ACSS3Q9H6R3 686 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 FAM105AQ9NUU6 356 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 REV1Q9UBZ9 1251 aa2.98□□□□□ -1.93
RNU6-1041P-201ENST00000516254 FAM95CA0A1B0GW59 222 aa2.97□□□□□ -1.93
RNU6-1041P-201ENST00000516254 KRBA1A5PL33 1030 aa2.97□□□□□ -1.93
RNU6-1041P-201ENST00000516254 TNFRSF10CO14798 259 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms