RNA–Protein interactions for RNA: ENST00000515802.5

SH3BP2-229, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,247 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-229ENST00000515802 RTN1Q16799 776 aa17.52■□□□□ 0.39
SH3BP2-229ENST00000515802 KRT40Q6A162 431 aa17.52■□□□□ 0.39
SH3BP2-229ENST00000515802 TMTC2Q8N394 836 aa17.52■□□□□ 0.39
SH3BP2-229ENST00000515802 ENAHQ8N8S7 591 aaPredicted RBP17.52■□□□□ 0.39
SH3BP2-229ENST00000515802 TRIM44Q96DX7 344 aaPredicted RBP17.52■□□□□ 0.39
SH3BP2-229ENST00000515802 SLC26A6Q9BXS9 759 aa17.52■□□□□ 0.39
SH3BP2-229ENST00000515802 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.52■□□□□ 0.39
SH3BP2-229ENST00000515802 BBOX1O75936 387 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 FMNL1O95466 1100 aaPredicted RBP17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 RBM43Q6ZSC3 357 aaKnown RBP17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 AKT1S1Q96B36 256 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 GOLPH3LQ9H4A5 285 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 GGA1Q9UJY5 639 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 CLIC4Q9Y696 253 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 NAV1Q8NEY1 1877 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 PLSCR1O15162 318 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 CYP2D6P10635 497 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 PCP11498 1178 aaKnown RBP17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 ATP2B4P23634 1241 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 RCAN1P53805 252 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 DIXDC1Q155Q3 683 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 ZSCAN10Q96SZ4 725 aaPredicted RBP17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 TNMDQ9H2S6 317 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 CD209Q9NNX6 404 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 POLR3EQ9NVU0 708 aa17.51■□□□□ 0.39
SH3BP2-229ENST00000515802 COL11A2P13942 1736 aaPredicted RBP17.5■□□□□ 0.39
SH3BP2-229ENST00000515802 GUCY1A2P33402 732 aa17.5■□□□□ 0.39
SH3BP2-229ENST00000515802 SSRP1Q08945 709 aaKnown RBP17.5■□□□□ 0.39
SH3BP2-229ENST00000515802 ZNF772Q68DY9 489 aaPredicted RBP17.5■□□□□ 0.39
SH3BP2-229ENST00000515802 NBPF11Q86T75 865 aa17.5■□□□□ 0.39
SH3BP2-229ENST00000515802 COL23A1Q86Y22 540 aaPredicted RBP17.5■□□□□ 0.39
SH3BP2-229ENST00000515802 CKAP2LQ8IYA6 745 aa17.5■□□□□ 0.39
SH3BP2-229ENST00000515802 LINC00301Q8NCQ3 95 aa17.5■□□□□ 0.39
SH3BP2-229ENST00000515802 POLLQ9UGP5 575 aa17.5■□□□□ 0.39
SH3BP2-229ENST00000515802 ME1P48163 572 aa17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 CCAR1Q8IX12 1150 aaKnown RBP17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 FANCBQ8NB91 859 aa17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 ARPP21Q9UBL0 812 aaPredicted RBP17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 MKRN1Q9UHC7 482 aaKnown RBP17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 TAOK2Q9UL54 1235 aa17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 TNS1Q9HBL0 1735 aaKnown RBP17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 ORC4O43929 436 aa17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 CCDC192P0DO97 292 aa17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 IL1R1P14778 569 aa17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 SBK1Q52WX2 424 aa17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 CMTR1Q8N1G2 835 aaKnown RBP17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 TBC1D16Q8TBP0 767 aa17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 NUP133Q8WUM0 1156 aa17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 PCDHA7Q9UN72 937 aa17.49■□□□□ 0.39
SH3BP2-229ENST00000515802 IGSF3O75054 1194 aa17.48■□□□□ 0.39
SH3BP2-229ENST00000515802 APBA3O96018 575 aa17.48■□□□□ 0.39
SH3BP2-229ENST00000515802 SNW1Q13573 536 aaKnown RBP17.48■□□□□ 0.39
SH3BP2-229ENST00000515802 YEATS4O95619 227 aa17.48■□□□□ 0.39
SH3BP2-229ENST00000515802 TYRO3Q06418 890 aa17.48■□□□□ 0.39
SH3BP2-229ENST00000515802 UVSSAQ2YD98 709 aa17.48■□□□□ 0.39
SH3BP2-229ENST00000515802 CRACR2BQ8N4Y2 399 aaPredicted RBP17.48■□□□□ 0.39
SH3BP2-229ENST00000515802 SH3RF3Q8TEJ3 882 aaPredicted RBP17.48■□□□□ 0.39
SH3BP2-229ENST00000515802 USP17L8P0C7I0 530 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 U2AF2P26368 475 aaKnown RBP eCLIP17.47■□□□□ 0.394e-7■■■■■ 30.7
SH3BP2-229ENST00000515802 IQCA1Q86XH1 822 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 CCDC82Q8N4S0 544 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 ENGASEQ8NFI3 743 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 MCM9Q9NXL9 1143 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 MRVI1Q9Y6F6 885 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 DDX60LQ5H9U9 1706 aaKnown RBP17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 CCDC196A0A1B0GTZ2 297 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 HMGB2P26583 209 aaKnown RBP17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 CLCN1P35523 988 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 GSTO1P78417 241 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 STK38Q15208 465 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 SLC4A8Q2Y0W8 1093 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 IFIT1BQ5T764 474 aaKnown RBP17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 ANO1Q5XXA6 986 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 TRIM22Q8IYM9 498 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 KCNG4Q8TDN1 519 aa17.47■□□□□ 0.39
SH3BP2-229ENST00000515802 MROH7-TTC4A0A0A0MT08 1334 aa17.46■□□□□ 0.39
SH3BP2-229ENST00000515802 ESPNB1AK53 854 aa17.46■□□□□ 0.39
SH3BP2-229ENST00000515802 PPEF1O14829 653 aaPredicted RBP17.46■□□□□ 0.39
SH3BP2-229ENST00000515802 NMT2O60551 498 aa17.46■□□□□ 0.39
SH3BP2-229ENST00000515802 TRIM29Q14134 588 aa17.46■□□□□ 0.39
SH3BP2-229ENST00000515802 ADALQ6DHV7 355 aa17.46■□□□□ 0.39
SH3BP2-229ENST00000515802 NLGN1Q8N2Q7 840 aa17.46■□□□□ 0.39
SH3BP2-229ENST00000515802 FSIP1Q8NA03 581 aa17.46■□□□□ 0.39
SH3BP2-229ENST00000515802 WASF1Q92558 559 aa17.46■□□□□ 0.39
SH3BP2-229ENST00000515802 SPTLC2O15270 562 aa17.45■□□□□ 0.38
SH3BP2-229ENST00000515802 PPP4CP60510 307 aa17.45■□□□□ 0.38
SH3BP2-229ENST00000515802 FAM160A1Q05DH4 1040 aa17.45■□□□□ 0.38
SH3BP2-229ENST00000515802 TROAPQ12815 778 aa17.45■□□□□ 0.38
SH3BP2-229ENST00000515802 FAM47AQ5JRC9 791 aa17.45■□□□□ 0.38
SH3BP2-229ENST00000515802 CCDC73Q6ZRK6 1079 aa17.45■□□□□ 0.38
SH3BP2-229ENST00000515802 RTFDC1Q9BY42 306 aaPredicted RBP17.45■□□□□ 0.38
SH3BP2-229ENST00000515802 A0A1W2PQ27 194 aa17.45■□□□□ 0.38
SH3BP2-229ENST00000515802 A0A1W2PQ64 194 aa17.45■□□□□ 0.38
SH3BP2-229ENST00000515802 A0A1W2PQD8 194 aa17.45■□□□□ 0.38
SH3BP2-229ENST00000515802 C12orf60Q5U649 245 aa17.45■□□□□ 0.38
SH3BP2-229ENST00000515802 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.45■□□□□ 0.38
SH3BP2-229ENST00000515802 USP25Q9UHP3 1055 aa17.45■□□□□ 0.38
SH3BP2-229ENST00000515802 ROBO3Q96MS0 1386 aa17.44■□□□□ 0.38
SH3BP2-229ENST00000515802 C6orf229H3BNL8 230 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 268.1 ms