RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 MDFIQ99750 246 aa9.67□□□□□ -0.86
RFC1-213ENST00000512275 SEC31BQ9NQW1 1179 aa9.67□□□□□ -0.86
RFC1-213ENST00000512275 GBP2P32456 591 aaPredicted RBP9.66□□□□□ -0.86
RFC1-213ENST00000512275 EIF4A3P38919 411 aaKnown RBP9.66□□□□□ -0.86
RFC1-213ENST00000512275 HFE2Q6ZVN8 426 aa9.66□□□□□ -0.86
RFC1-213ENST00000512275 DNAJC2Q99543 621 aaKnown RBP9.66□□□□□ -0.86
RFC1-213ENST00000512275 POP1Q99575 1024 aaKnown RBP9.66□□□□□ -0.86
RFC1-213ENST00000512275 UBE2OQ9C0C9 1292 aaKnown RBP9.66□□□□□ -0.86
RFC1-213ENST00000512275 SCAF11Q99590 1463 aaKnown RBP9.66□□□□□ -0.86
RFC1-213ENST00000512275 RBL2Q08999 1139 aa9.65□□□□□ -0.86
RFC1-213ENST00000512275 MAP3K11Q16584 847 aa9.65□□□□□ -0.86
RFC1-213ENST00000512275 GPAT2Q6NUI2 795 aa9.65□□□□□ -0.86
RFC1-213ENST00000512275 DPH6Q7L8W6 267 aa9.65□□□□□ -0.86
RFC1-213ENST00000512275 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.65□□□□□ -0.86
RFC1-213ENST00000512275 MUC3BQ9H195 1237 aa9.65□□□□□ -0.86
RFC1-213ENST00000512275 C14orf93Q9H972 538 aaKnown RBP9.65□□□□□ -0.86
RFC1-213ENST00000512275 KLF15Q9UIH9 416 aa9.65□□□□□ -0.86
RFC1-213ENST00000512275 NSFL1CQ9UNZ2 370 aaKnown RBP9.65□□□□□ -0.86
RFC1-213ENST00000512275 KNDC1Q76NI1 1749 aa9.65□□□□□ -0.87
RFC1-213ENST00000512275 MINDY4BA8MYZ0 360 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 GREM1O60565 184 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 GHRHP01286 108 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 BMP4P12644 408 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 LTKP29376 864 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 GTF2F1P35269 517 aaKnown RBP eCLIP9.64□□□□□ -0.87
RFC1-213ENST00000512275 TMEM132EQ6IEE7 984 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 FBXL19Q6PCT2 694 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 ADAMTSL4Q6UY14 1074 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 THEMISQ8N1K5 641 aaPredicted RBP9.64□□□□□ -0.87
RFC1-213ENST00000512275 NEDD1Q8NHV4 660 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 ASAP3Q8TDY4 903 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 ZNF296Q8WUU4 475 aaPredicted RBP9.64□□□□□ -0.87
RFC1-213ENST00000512275 EAF1Q96JC9 268 aaPredicted RBP9.64□□□□□ -0.87
RFC1-213ENST00000512275 SEC16BQ96JE7 1060 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 SPATA32Q96LK8 384 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 NAGPAQ9UK23 515 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 SLC6A14Q9UN76 642 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 TLR6Q9Y2C9 796 aa9.64□□□□□ -0.87
RFC1-213ENST00000512275 PLEKHG1Q9ULL1 1385 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 CNTNAP5Q8WYK1 1306 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 ADARB2-AS1A8MUL3 147 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 PAGE1O75459 146 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 EIF2AK2P19525 551 aaKnown RBP9.63□□□□□ -0.87
RFC1-213ENST00000512275 PCBP4P57723 403 aaKnown RBP9.63□□□□□ -0.87
RFC1-213ENST00000512275 RPS26P62854 115 aaKnown RBP9.63□□□□□ -0.87
RFC1-213ENST00000512275 LMNB2Q03252 620 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 AGMOQ6ZNB7 445 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 BSNDQ8WZ55 320 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.63□□□□□ -0.87
RFC1-213ENST00000512275 NT5C1AQ9BXI3 368 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 LNPKQ9C0E8 428 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 RBSNQ9H1K0 784 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 IGFLR1Q9H665 355 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 SOX13Q9UN79 622 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 EID1Q9Y6B2 187 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 ADAMTS13Q76LX8 1427 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 DIP2AQ14689 1571 aa9.63□□□□□ -0.87
RFC1-213ENST00000512275 ST20-MTHFSA0A0A6YYL1 179 aa9.62□□□□□ -0.87
RFC1-213ENST00000512275 SMNDC1O75940 238 aaKnown RBP eCLIP9.62□□□□□ -0.87
RFC1-213ENST00000512275 PF4P02776 101 aa9.62□□□□□ -0.87
RFC1-213ENST00000512275 ARAFP10398 606 aa9.62□□□□□ -0.87
RFC1-213ENST00000512275 TTBK2Q6IQ55 1244 aa9.62□□□□□ -0.87
RFC1-213ENST00000512275 PLD4Q96BZ4 506 aa9.62□□□□□ -0.87
RFC1-213ENST00000512275 CLEC4MQ9H2X3 399 aaPredicted RBP9.62□□□□□ -0.87
RFC1-213ENST00000512275 LRRC4BQ9NT99 713 aa9.62□□□□□ -0.87
RFC1-213ENST00000512275 EIF3AQ14152 1382 aaKnown RBP9.62□□□□□ -0.87
RFC1-213ENST00000512275 B3GALT4O96024 378 aa9.61□□□□□ -0.87
RFC1-213ENST00000512275 TFE3P19532 575 aaPredicted RBP9.61□□□□□ -0.87
RFC1-213ENST00000512275 MAP2K3P46734 347 aa9.61□□□□□ -0.87
RFC1-213ENST00000512275 TBC1D8BQ0IIM8 1120 aa9.61□□□□□ -0.87
RFC1-213ENST00000512275 CAMK2GQ13555 558 aaPredicted RBP9.61□□□□□ -0.87
RFC1-213ENST00000512275 PERM1Q5SV97 790 aa9.61□□□□□ -0.87
RFC1-213ENST00000512275 CEP135Q66GS9 1140 aa9.61□□□□□ -0.87
RFC1-213ENST00000512275 VN1R5Q7Z5H4 357 aa9.61□□□□□ -0.87
RFC1-213ENST00000512275 FAM35AQ86V20 835 aa9.61□□□□□ -0.87
RFC1-213ENST00000512275 ADAM19Q9H013 955 aa9.61□□□□□ -0.87
RFC1-213ENST00000512275 TMEM39AQ9NV64 488 aa9.61□□□□□ -0.87
RFC1-213ENST00000512275 SUPT16HQ9Y5B9 1047 aaKnown RBP9.61□□□□□ -0.87
RFC1-213ENST00000512275 YTHDC2Q9H6S0 1430 aaKnown RBP9.61□□□□□ -0.87
RFC1-213ENST00000512275 LMTK3Q96Q04 1460 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 OIP5O43482 229 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 IGHA1P01876 353 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 CPB1P15086 417 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 ADH6P28332 368 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 ADH7P40394 386 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 SOX9P48436 509 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 FAM160A1Q05DH4 1040 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 PCNX4Q63HM2 1172 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 PODNQ7Z5L7 613 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 BEND7Q8N7W2 519 aaPredicted RBP9.6□□□□□ -0.87
RFC1-213ENST00000512275 LPIN3Q9BQK8 851 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 FRRS1LQ9P0K9 344 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 STK26Q9P289 416 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 GPN3Q9UHW5 284 aaPredicted RBP9.6□□□□□ -0.87
RFC1-213ENST00000512275 METP08581 1390 aa9.6□□□□□ -0.87
RFC1-213ENST00000512275 MED14O60244 1454 aa9.59□□□□□ -0.87
RFC1-213ENST00000512275 XRN1Q8IZH2 1706 aaKnown RBP9.59□□□□□ -0.87
RFC1-213ENST00000512275 CHD2O14647 1828 aaKnown RBP9.59□□□□□ -0.87
RFC1-213ENST00000512275 PCDH1Q08174 1060 aa9.59□□□□□ -0.87
RFC1-213ENST00000512275 RASIP1Q5U651 963 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms